| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,066,319 | Δ1 bp | 6.7% | coding (855/897 nt) | ygfI ← | putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,066,319 | 0 | C | . | 6.7% | 637.6 / 38.4 | 179 | coding (855/897 nt) | ygfI | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (85/82); new base . (5/7); total (90/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.81e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
TGCATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCC > NC_000913/3066174‑3066462 | tGCATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATc > 2:609506/1‑149 (MQ=255) aTCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTg > 2:219908/1‑149 (MQ=255) tCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGC‑ATATTGCTGAAG‑ATCGTga < 1:24073/149‑2 (MQ=38) cGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGCATAT‑TGCTGAAG‑ATCGTgac < 3:678422/149‑3 (MQ=38) cTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCgg > 4:1670009/1‑149 (MQ=255) cTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGCATAT‑TGCTGAAG‑ATCGTgac > 1:1303158/1‑145 (MQ=38) tCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGtat > 3:331906/1‑149 (MQ=255) tCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGtat > 2:1216830/1‑149 (MQ=255) tCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGC‑ATATTGCTGAAG‑ATCGTGACgg < 1:840167/146‑1 (MQ=38) tGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATaa > 4:499155/1‑149 (MQ=255) ggAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAAc > 1:1045209/1‑149 (MQ=255) ggAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAAc > 3:1623088/1‑149 (MQ=255) gAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGc > 1:1069864/1‑140 (MQ=255) gAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACg > 2:1251786/1‑149 (MQ=255) aaTGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACgatg < 1:1009972/149‑1 (MQ=255) gcgcCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGAtt > 1:455724/1‑149 (MQ=255) ccTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCt < 4:331906/149‑1 (MQ=255) tGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa < 1:1251786/149‑1 (MQ=255) ggACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATGTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACCAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGa > 4:1393225/1‑149 (MQ=255) gACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa < 3:1393225/149‑1 (MQ=255) gACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa < 2:455724/149‑1 (MQ=255) aCATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAAt > 3:525368/1‑149 (MQ=255) atatTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa > 4:1626633/1‑141 (MQ=255) atatTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaa > 3:1101185/1‑149 (MQ=255) tatTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaaa < 2:1283619/149‑1 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa > 4:103685/1‑136 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa < 3:103685/136‑1 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa > 4:644399/1‑141 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa < 3:644399/141‑1 (MQ=255) caccacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGata > 1:57549/1‑149 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATaa < 2:1406846/120‑1 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATaa < 4:845342/120‑1 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACgat < 1:1773394/124‑1 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGa < 4:188239/133‑1 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTc > 1:625924/1‑149 (MQ=255) cacGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGCCACGATGCTTCAGC‑ATATTGCTGAAG‑ATCGTgac < 1:1279205/113‑3 (MQ=25) aTCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGc < 1:1515996/149‑1 (MQ=255) ttAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCata > 2:628205/1‑149 (MQ=255) gCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAAc > 4:770948/1‑111 (MQ=255) gCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAAc < 3:770948/111‑1 (MQ=255) ccACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTc < 4:678664/119‑1 (MQ=255) tCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACgat < 4:1295449/108‑1 (MQ=255) ttCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCt > 2:1788682/1‑149 (MQ=255) gACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATG‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATGTACATAGGCCtgtg > 3:1173735/1‑149 (MQ=255) aCTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGc > 2:183410/1‑149 (MQ=255) ttACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCt < 3:486653/107‑1 (MQ=255) ttACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCt > 4:486653/1‑107 (MQ=255) tACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGt < 3:1319787/149‑1 (MQ=255) cacCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGc < 3:813292/149‑1 (MQ=255) atttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATc > 3:504382/1‑128 (MQ=255) atttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCaaaa > 1:386115/1‑149 (MQ=255) tttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGAt > 1:1380481/1‑99 (MQ=255) tttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAat > 1:164712/1‑149 (MQ=255) ttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCaaaa < 4:702347/147‑1 (MQ=255) ttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCaaaa > 3:702347/1‑147 (MQ=255) ttaattGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAata < 4:1114096/149‑1 (MQ=255) ttGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGa > 4:520160/1‑104 (MQ=255) ttGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTc > 3:324946/1‑149 (MQ=255) cAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGc < 2:470070/128‑1 (MQ=255) ccGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa > 3:1605331/1‑92 (MQ=255) ccGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGaa < 4:1605331/92‑1 (MQ=255) ccGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCg < 4:1270105/126‑1 (MQ=255) cGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGa < 2:386115/149‑1 (MQ=255) tGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaa < 2:1563502/86‑1 (MQ=255) tGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATaa > 1:1563502/1‑86 (MQ=255) tGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATAtt > 4:557493/1‑129 (MQ=255) tGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATAtt < 3:557493/129‑1 (MQ=255) aTGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCa > 1:1850447/1‑125 (MQ=255) aTGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCa < 2:1055748/125‑1 (MQ=255) gACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAg > 4:1749278/1‑149 (MQ=255) cTCGTCCCGTCACGAT‑CTTCAGCAATG‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTCCAGCGTTGCCGGATTCACCAGTCGCCAGGc < 4:1173735/149‑1 (MQ=255) cTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAatat > 3:1823401/1‑117 (MQ=255) cTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAatat < 4:1823401/117‑1 (MQ=255) tCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCTGGATTCACCAGTCgagatcga > 1:815989/1‑142 (MQ=255) gTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGTCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCt > 3:1273213/1‑79 (MQ=255) tCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCaaaa < 3:1749278/149‑1 (MQ=255) ccGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCa > 1:1824125/1‑133 (MQ=255) gTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGc > 3:1654601/1‑115 (MQ=255) gTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCg < 4:295105/149‑1 (MQ=255) tCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg > 2:360754/1‑149 (MQ=255) tCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg < 3:217502/149‑1 (MQ=255) tCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg < 2:164712/149‑1 (MQ=255) aCGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCgg < 2:829816/93‑1 (MQ=255) cgatgcTTCAGCATAT‑TGCTGAAG‑ATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGc > 3:93788/6‑144 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTc > 4:1620335/1‑107 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTc < 1:1469294/107‑1 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGa < 3:1684969/119‑1 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCaaaa > 2:1473300/1‑140 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATc > 1:426089/1‑149 (MQ=255) gAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATc > 4:945922/1‑149 (MQ=255) tgcTTCAGC‑ATATTGCTGAAG‑ATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg < 3:1132620/141‑1 (MQ=255) cTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCAcc < 1:360754/149‑1 (MQ=255) ttCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCg > 1:827179/1‑149 (MQ=255) tCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCaaaa > 1:1862437/1‑135 (MQ=255) tCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCaaaa < 2:1862437/135‑1 (MQ=255) a‑tGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAAt < 2:1319592/149‑1 (MQ=255) tGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg > 2:1173393/1‑128 (MQ=255) tGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCgg < 1:1173393/128‑1 (MQ=255) tGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAg > 4:424786/1‑140 (MQ=255) tGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAg < 3:424786/140‑1 (MQ=255) | TGCATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAATGACTCGTCCCGTCACGAT‑CTTCAGCAATA‑TGCTGAAGCATCGTGGCGGTATAACGATGATTTCTGATTGAATAAAGATATTCCTGCATATACATCGGCCTGTGCGGTGCATCAAAATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCC > NC_000913/3066174‑3066462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |