| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 200763 = | 185 (0.990) | 16 (0.090) | 10/226 | NT | 8.5% | coding (282/486 nt) | skp | periplasmic chaperone |
| ? | NC_000913 | 200790 = | 168 (0.950) | coding (309/486 nt) | skp | periplasmic chaperone | |||||
GTTGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/200916‑200763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagcaGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGAC > NC_000913/200790‑200934 GTTGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCT < 1:1026544/149‑1GTTGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCT < 4:305328/149‑1 TGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGA < 3:423935/149‑1 TGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGA < 1:1815847/149‑1 AAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA > 2:1020289/1‑149 AAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA > 2:1751078/1‑149 AAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA > 3:1057556/1‑149 AAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA > 4:719159/1‑149 AAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA > 3:1280105/1‑149 GGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAG < 1:1807337/140‑1 GGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAG > 2:1807337/1‑140 ATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGA < 3:826859/118‑1 ATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGA > 4:826859/1‑118 CTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCT < 1:217089/107‑1 CTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCT > 2:1495195/1‑107 CTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCT > 2:217089/1‑107 CTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTACTCAAAAGCCTGCGCTTTCT < 1:1495195/107‑1 GATCCTGCTCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTG < 1:623861/136‑1 GATCCTGCTCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTG > 2:623861/1‑136 TCCTGCTCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTG > 4:841467/1‑149 TGCTCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTT < 3:841467/149‑1 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACA > 2:1252690/1‑149 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACA > 4:150427/1‑149 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACA > 3:1802653/1‑149 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGA > 2:410384/1‑129 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGA < 1:410384/129‑1 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGT > 3:1256697/1‑96 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGT < 4:1256697/96‑1 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGT > 2:1489853/1‑87 TCAAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGT < 1:1489853/87‑1 AAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAAC > 4:102029/1‑149 AAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTC < 2:1152386/69‑1 AAAAGCCTGCGCTTTCTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTC > 1:1152386/1‑69 GAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGA < 2:713977/149‑1 GAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGA < 3:84651/149‑1 AGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCA > 2:1434312/1‑88 AGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCA < 1:1434312/88‑1 AGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTACCCAGACTGCTGTGAAATCCGTTGCCAACAGCCCGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGAC < 4:1802653/149‑1 GTTGTAAGCAACGGCGTTTGCATCAACAACCAGATCGATATCCTGGCTGTTGGCAACGGATTTCACAGCAGTCTGGATACGAGTAACCAGTTTGCCGCGTTCTTCGTTGGAACGACGTGCGCGATCCTGCTCAAAAGCCTGCGCTTTCTGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/200916‑200763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagcaGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGAC > NC_000913/200790‑200934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |