| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2909114 = | 170 (0.910) | 12 (0.070) | 10/230 | NT | 6.6% | coding (553/1638 nt) | pyrG | CTP synthetase |
| ? | NC_000913 | 2909151 = | 177 (0.980) | coding (516/1638 nt) | pyrG | CTP synthetase | |||||
TGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2909265‑2909114‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTT > NC_000913/2909151‑2909272 TGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGTCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 1:539011/1‑149TGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 3:635028/1‑149 GACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG < 1:238457/149‑1 GACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG > 1:1369965/1‑149 GACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCATTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTTAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG < 2:400113/149‑1 ACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGT < 2:770134/149‑1 AAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG < 4:575514/132‑1 AAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 3:575514/1‑132 TCGGCGGTACATTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 3:1636098/1‑129 GTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 2:156160/1‑118 GTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG < 1:156160/118‑1 TGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG < 3:1364780/114‑1 TGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG > 4:1364780/1‑114 ATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG > 4:470488/1‑109 ATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTG < 3:470488/109‑1 GAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG < 3:1323255/107‑1 GAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG < 2:404723/107‑1 GAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG > 4:1323255/1‑107 GAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGG > 1:404723/1‑107 ACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTT > 3:608128/1‑147 ACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTT < 4:608128/147‑1 GTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAG > 4:954178/1‑111 GTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAG < 3:954178/111‑1 TATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTAC > 1:957802/1‑149 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTAC < 3:338855/147‑1 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTAC > 4:338855/1‑147 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGC > 2:3278/1‑128 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGC < 1:3278/128‑1 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTT > 3:811047/1‑89 ACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTT < 4:811047/89‑1 GACGCTGGTGCCGTACATGGCAGCGTCTGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATG < 2:957802/149‑1 TGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTT > 3:630226/1‑124 TGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTT < 4:630226/124‑1 GCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTC > 3:1504385/1‑55 GCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTC < 4:1504385/55‑1 TGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2909265‑2909114‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTT > NC_000913/2909151‑2909272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |