New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 183652 =137 (0.730)12 (0.070) 10/218 NT 8.1% intergenic (+32/+57) cdaR/yaeH carbohydrate diacid regulon transcriptional regulator; autoregulator/UPF0325 family protein
?NC_000913 183685 = 147 (0.860)intergenic (+65/+24) cdaR/yaeH carbohydrate diacid regulon transcriptional regulator; autoregulator/UPF0325 family protein

Only 100 of 235 total aligned reads displayed.

GTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATC  >  NC_000913/183505‑183799
                                                                                                                                                   |                                                                                                                                                   
gTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCA                                                                                                                                                    <  1:1356036‑M1/149‑1 (MQ=255)
 tAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCAT                                                                                                                                                   >  1:1421440‑M1/1‑149 (MQ=255)
  aaTACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATT                                                                                                                                                  >  4:1845355‑M1/1‑149 (MQ=255)
  aaTACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATT                                                                                                                                                  <  2:1794322‑M1/149‑1 (MQ=255)
  aaTACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATT                                                                                                                                                  <  3:31269‑M1/149‑1 (MQ=255)
   gaccgcagcgaagttgatcttaagcgtaagatcctcgacgacttacgtcacctggagtcagtcgtaaccaataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTc                                                                                                                                                 >  4:683917‑M1/145‑149 (MQ=255)
     ccgcagcgaagttgatcttaagcgtaagatcctcgacgacttacgtcacctggagtcagtcgtaaccaataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTccc                                                                                                                                               >  2:1222736‑M1/143‑149 (MQ=255)
     aCCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCC                                                                                                                                               <  4:782477‑M1/149‑1 (MQ=255)
       ccTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCT                                                                                                                                             <  3:474857‑M1/149‑1 (MQ=255)
            aGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCC                                                                                                                                               >  4:411956‑M1/1‑142 (MQ=255)
              tATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCg                                                                                                                                      >  2:502084/1‑149 (MQ=255)
                 cGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcg                                                                                                                                   >  3:1022021‑M1/1‑140 (MQ=255)
                 cGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAg                                                                                                                                   <  1:1858695/149‑1 (MQ=255)
                         tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgagg                                                                                                                           <  4:1022021‑M1/149‑18 (MQ=255)
                         tCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAgagg                                                                                                                           >  3:1845355‑M2/1‑145 (MQ=255)
                            tataTCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgagg                                                                                                                           >  3:444245‑M1/1‑129 (MQ=255)
                            tataTCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAgagggga                                                                                                                        >  2:1514633‑M2/1‑142 (MQ=255)
                             atatCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgaggggaa                                                                                                                       <  2:881487‑M1/149‑22 (MQ=255)
                              tatCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    <  4:534858/135‑1 (MQ=255)
                              tatCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    >  3:534858/1‑135 (MQ=255)
                               atCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgaggg                                                                                                                          >  4:262876‑M1/1‑126 (MQ=255)
                                tCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgag                                                                                                                            >  2:959814‑M1/1‑125 (MQ=255)
                                tCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    >  1:341074/1‑133 (MQ=255)
                                tCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    <  2:341074/133‑1 (MQ=255)
                                tCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                                                                    >  1:256187/1‑149 (MQ=255)
                                         aCCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCC                                                                                                                                                <  3:110614‑M1/112‑1 (MQ=255)
                                           cGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAcc                                                                                                         >  1:1033920/1‑149 (MQ=255)
                                           cGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAcc                                                                                                         >  1:293471/1‑149 (MQ=255)
                                             ttacgtcacctggagtcagtcgtaaccaataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTccc                                                                                                                                               <  4:459664‑M1/7‑1 (MQ=255)
                                              gCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGaa                                                                                                               <  1:831810/140‑1 (MQ=255)
                                              gCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGaa                                                                                                               >  2:831810/1‑140 (MQ=255)
                                              gCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTc                                                                                                      >  1:1145414/1‑149 (MQ=255)
                                                   aTTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAc                                                                                                          >  1:331794/1‑140 (MQ=255)
                                                   aTTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAc                                                                                                          <  2:331794/140‑1 (MQ=255)
                                                   aTTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAc                                                                                                          <  2:222952/140‑1 (MQ=255)
                                                    tttGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAgagggga                                                                                                                        >  2:1537697‑M2/1‑118 (MQ=255)
                                                       gggCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGa                                                                                             <  3:750320/149‑1 (MQ=255)
                                                        ggCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    <  3:10690/109‑1 (MQ=255)
                                                        ggCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGaa                                                                                                                                    >  4:10690/1‑109 (MQ=255)
                                                        ggCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGc                                                                                                                    <  1:1458138/125‑1 (MQ=255)
                                                        ggCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGat                                                                                            >  3:629131/1‑149 (MQ=255)
                                                             ttttGATGACGGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGATAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGattatt                                                                                        >  4:1642400/1‑148 (MQ=255)
                                                             ttttGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTaa                                                                                                           <  4:289723/129‑1 (MQ=255)
                                                             ttttGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGattatt                                                                                        <  3:1642400/148‑1 (MQ=255)
                                                                   tgaCAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGt                                                                                 >  2:727162/1‑149 (MQ=255)
                                                                   taaccaataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTCCCCTCAGCCCGAAGGGTAGAGGGGaa                                                                                                                       >  4:1774580‑M1/81‑111 (MQ=255)
                                                                   taaccaataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTCCCCTCAGCCCGAAGGGTAGAGGGGaa                                                                                                                       <  3:1774580‑M1/31‑1 (MQ=255)
                                                                    gaCAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAAc                                                                                                          >  3:406331/1‑123 (MQ=255)
                                                                    gaCAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCC                                                                                                                                              >  3:284397‑M1/1‑87 (MQ=255)
                                                                    gaCAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCC                                                                                                                                              >  1:1088078‑M1/1‑87 (MQ=255)
                                                                       aGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTAcgc                                                                                   >  1:99711/1‑143 (MQ=255)
                                                                        aataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTc                                                                                                                                                 >  4:859686‑M1/76‑80 (MQ=255)
                                                                        aataagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTCCCCTCAGCCCGAAGGGTAGAGGGGaa                                                                                                                       >  2:274720‑M1/76‑106 (MQ=255)
                                                                          ttGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGat                                                                                            <  4:1816898/131‑1 (MQ=255)
                                                                          ttGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGat                                                                                            >  3:1816898/1‑131 (MQ=255)
                                                                          taagatcagcgagattgaagccgatctggaaaaactaacgcgtaaataatcccgaactgacggttaattcgggCATTCCCCTCAGCCCGAAGGGTAGAGGGGAAt                                                                                                                      >  4:461745‑M1/74‑105 (MQ=255)
                                                                              tgctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTaa                                                                                                           <  2:553264/112‑1 (MQ=255)
                                                                              tgctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTaa                                                                                                           >  1:553264/1‑112 (MQ=255)
                                                                              tgctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCgg                                                                                               >  1:1534720/1‑124 (MQ=255)
                                                                              tgctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCa                                                                      >  3:439418/1‑149 (MQ=255)
                                                                               gctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCC                                                                                                                                              >  2:796208‑M1/1‑76 (MQ=255)
                                                                               gctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCC                                                                                                                                              <  1:796208‑M1/76‑1 (MQ=255)
                                                                                ctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTAttt                                                                                       >  1:1747368/1‑130 (MQ=255)
                                                                                ctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGa                                                                    <  1:1584364/149‑1 (MQ=255)
                                                                                ctgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGATAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTAttt                                                                                       <  2:1747368/130‑1 (MQ=255)
                                                                                 tgTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGAt                                                                   >  3:723321/1‑149 (MQ=255)
                                                                                  gTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATc                                                                  >  1:650001/1‑149 (MQ=255)
                                                                                      gtgGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAggg                                                                                                                                 <  1:504250/82‑1 (MQ=255)
                                                                                       tgGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCC                                                                                                                                               <  2:1649270‑M1/67‑1 (MQ=255)
                                                                                        ggCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgaggg                                                                                                                          >  2:1285629‑M1/1‑69 (MQ=255)
                                                                                        ggCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCtacccttcgggctgaggg                                                                                                                          <  1:1285629‑M1/87‑19 (MQ=255)
                                                                                           gTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAt                                                         >  3:142233/1‑149 (MQ=255)
                                                                                            ttACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAtc                                                        >  3:13795/1‑149 (MQ=255)
                                                                                               cAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCg                                                     <  4:1483656/149‑1 (MQ=255)
                                                                                                aaCTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTaa                                                                                                           >  4:627185/1‑94 (MQ=255)
                                                                                                aaCTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATc                                                                  >  3:1228327/1‑135 (MQ=255)
                                                                                                aaCTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATc                                                                  <  4:1228327/135‑1 (MQ=255)
                                                                                                   tGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGa                                                 >  4:1545748/1‑149 (MQ=255)
                                                                                                     gATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATc                                               >  1:1785720/1‑149 (MQ=255)
                                                                                                      aTGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCt                                              <  3:1545748/149‑1 (MQ=255)
                                                                                                       tGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCgg                                                                                               >  3:423975/1‑99 (MQ=255)
                                                                                                       tGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAACTGACGGTTAATTCggg                                                                                              <  1:1704241/100‑1 (MQ=255)
                                                                                                         aaactaacgcgtaaataatcccgaactgacggttaattcgggCATTCCCCTCATCCCGAAggg                                                                                                                                 <  4:1305369‑M1/21‑1 (MQ=255)
                                                                                                          agagCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTAtt                                          <  1:924856/149‑1 (MQ=255)
                                                                                                                        tGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAAtct                                                       <  2:1706482/122‑1 (MQ=255)
                                                                                                                            ttAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAg                        >  1:1379972/1‑149 (MQ=255)
                                                                                                                             tAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGcc                                                                                                                   <  2:1387654/57‑1 (MQ=255)
                                                                                                                               aGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGc                                                    <  2:362359/118‑1 (MQ=255)
                                                                                                                               aGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGGTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGc                                                    >  1:362359/1‑118 (MQ=255)
                                                                                                                                  ttGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGt                      <  3:934768/145‑1 (MQ=255)
                                                                                                                                     aGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCTCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTaa               <  4:1353547/149‑1 (MQ=255)
                                                                                                                                      ggcggcGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAAtt                                                                                                             >  4:443538/1‑54 (MQ=255)
                                                                                                                                      ggcggcGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAAtt                                                                                                             <  3:460304/54‑1 (MQ=255)
                                                                                                                                         ggcgCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGt                      >  3:1337513/1‑138 (MQ=255)
                                                                                                                                          gcgcTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGt                      >  2:1039174/1‑137 (MQ=255)
                                                                                                                                                gCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACgactgac                             <  2:1434330/124‑1 (MQ=255)
                                                                                                                                                 cTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGAt   >  4:1109569/1‑149 (MQ=255)
                                                                                                                                                  tCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCtt                                                             >  4:1391329/1‑90 (MQ=255)
                                                                                                                                                  tCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTa                                            <  2:113942/107‑1 (MQ=255)
                                                                                                                                                  tCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATc  >  1:438742/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAGGTTATGCGTTAAGGTTGAGGCGGCGCTGGCTCATTCCCCTCAGCCCGAAGGGTAGAGGGGAATGCCCGAATTAACCGTCAGTTCGGGATTATTTACGCGTTAGTTTTTCCAGATCGGCTTCAATCTCGCTGATCTTATTGGTTACGACTGACTCCAGGTGACGTAAGTCGTCGAGGATC  >  NC_000913/183505‑183799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.