BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1846862 =	96 (0.510)	5 (0.030)	4/224	NT	5.0%	coding (99/1962 nt)	topB	DNA topoisomerase III
*	?	NC_000913	1846899 =	98 (0.560)	5 (0.030)	4/224	NT	5.0%	coding (62/1962 nt)	topB	DNA topoisomerase III

Only 100 of 119 total aligned reads displayed.

TGGTCACGGAGGGTCGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAG  >  NC_000913/1846714‑1847009

tGGTCACGGAGGGTCGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTa                                                                                                                                                     <  4:860760/149‑1 (MQ=255)

cgccgagtttggcattgaactgacggcaattggcgaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaa                                                                                                                                                     >  3:1691506‑M1/149‑149 (MQ=255)

 ggTCACGGAGGGTCGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTAc                                                                                                                                                    <  2:906382/149‑1 (MQ=255)

          gggTCGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGa                                                                                                                                           >  3:564746/1‑149 (MQ=255)

              cGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       <  2:705628/149‑1 (MQ=255)

              cGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       <  2:1782576/149‑1 (MQ=255)

               ggggCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       >  2:328829/1‑148 (MQ=255)

               ggggCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       >  2:1805834/1‑148 (MQ=255)

               ggggCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       <  1:328829/148‑1 (MQ=255)

               ggggCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATaaa                                                                                                                                       <  1:1805834/148‑1 (MQ=255)

                 aactgacggcaattggcgaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaAcc                                                                                                                                                   <  2:1743773‑M1/3‑1 (MQ=255)

                 aactgacggcaattggcgaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaAcc                                                                                                                                                   >  1:1743773‑M1/132‑134 (MQ=255)

                  gCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCa                                                                                                                                   >  3:1397953/1‑149 (MQ=255)

                        ggcaattggcgaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaAc                                                                                                                                                    >  2:455325‑M1/125‑126 (MQ=255)

                        aTTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCt                                                                                                                             >  4:1406135/1‑149 (MQ=255)

                            ccACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTcc                                                                                                                         >  3:1535216/1‑149 (MQ=255)

                             cACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCa                                                                                                                                   >  3:75255/1‑138 (MQ=255)

                             cACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCa                                                                                                                                   <  4:75255/138‑1 (MQ=255)

                             cACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCg                                                                                                                        >  1:1632541/1‑149 (MQ=255)

                              aCTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCgg                                                                                                                       >  4:1296555/1‑149 (MQ=255)

                                ttttCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATc                                                                                                                                 >  1:1737808/1‑137 (MQ=255)

                                ttttCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATc                                                                                                                                 <  2:1737808/137‑1 (MQ=255)

                                ttttCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTg                                                                                                                     >  1:582248/1‑149 (MQ=255)

                                  ttCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCg                                                                                                                   <  4:564746/149‑1 (MQ=255)

                                  gaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaa                                                                                                                                                     <  1:1633368‑M1/1‑1 (MQ=255)

                                  gaactggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaa                                                                                                                                                     >  2:1633368‑M1/115‑115 (MQ=255)

                                    ccGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAg                                                                                                                                      >  1:1368226/1‑128 (MQ=255)

                                    ccGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAg                                                                                                                                      <  2:1368226/128‑1 (MQ=255)

                                    actggtgccagcgcgcggcggtcgtgccatggttgagattcgttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGt                                                                                                                 >  2:544509‑M1/113‑149 (MQ=255)

                                       ggACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTg                                                                                                              <  4:100649/149‑1 (MQ=255)

                                         aCAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTggg                                                                                                            <  2:957198/149‑1 (MQ=255)

                                            aTCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAg                                                                                                         <  3:1406135/149‑1 (MQ=255)

                                              cGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGa                                                                                                       <  2:1425252/149‑1 (MQ=255)

                                                  aaaTCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAg                                                                                                         <  2:1632664/143‑1 (MQ=255)

                                                   aaTCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCa                                                                                                  <  2:1808288/149‑1 (MQ=255)

                                                   aaTCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCa                                                                                                  <  4:1397953/149‑1 (MQ=255)

                                                    aTCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAg                                                                                                 <  3:1589247/149‑1 (MQ=255)

                                                        gCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAAt                                                                                             <  1:659217/149‑1 (MQ=255)

                                                         cAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATg                                                                                            <  3:1611514/149‑1 (MQ=255)

                                                         cAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATg                                                                                            <  4:111217/149‑1 (MQ=255)

                                                             aTTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGgcgc                                                                                        <  4:524692/149‑1 (MQ=255)

                                                              ttCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATc                                                                                                   >  4:684022/1‑137 (MQ=255)

                                                              ttCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGgcgcg                                                                                       >  2:32314/1‑149 (MQ=255)

                                                                 cAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGgcgcgcgc                                                                                    >  3:547494/1‑149 (MQ=255)

                                                                   gcgcgcATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTAc                                                                                                                                                    <  2:508202/83‑1 (MQ=255)

                                                                   gcgcgcATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTAc                                                                                                                                                    >  1:508202/1‑83 (MQ=255)

                                                                        cATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTc                                                                             <  4:1535216/149‑1 (MQ=255)

                                                                           aGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGt                                                                          <  1:32314/149‑1 (MQ=255)

                                                                             gttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaAc                                                                                                                                                    >  3:167506‑M1/72‑73 (MQ=255)

                                                                             gttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaAc                                                                                                                                                    <  4:167506‑M1/2‑1 (MQ=255)

                                                                             gttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCAc                                                                                                                                               <  3:1341229‑M1/7‑1 (MQ=255)

                                                                             gttaattcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCAc                                                                                                                                               >  4:1341229‑M1/72‑78 (MQ=255)

                                                                                  ttcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCACTCGATAAAGCCATCGCCTTTCCGGt                                                                                                                      >  1:1546657‑M1/67‑98 (MQ=255)

                                                                                  ttcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCACTCGATAAAGCCATCGCCTTTCCGGt                                                                                                                      <  2:1546657‑M1/32‑1 (MQ=255)

                                                                                  ttcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGttt                                                                                                               <  2:1874584‑M1/39‑1 (MQ=255)

                                                                                  ttcaatgcggttgtttattgccgaaaaaccgagtctggcgcgcgccattgctgatgtcctgcccaaACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGttt                                                                                                               >  1:1874584‑M1/67‑105 (MQ=255)

                                                                                         gCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATaaa                                                            <  3:1296555/149‑1 (MQ=255)

                                                                                               ggCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCaa                                                                >  2:95257/1‑139 (MQ=255)

                                                                                               ggCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCaa                                                                <  1:95257/139‑1 (MQ=255)

                                                                                                        tGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAAtt                                             >  3:1024344/1‑149 (MQ=255)

                                                                                                         gCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACt                                                                                                                                              <  4:1112580/51‑1 (MQ=255)

                                                                                                         gCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACt                                                                                                                                              >  3:1112580/1‑51 (MQ=255)

                                                                                                         gCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCAtt                                                  <  3:361889/143‑1 (MQ=255)

                                                                                                         gCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCAtt                                                  >  4:361889/1‑143 (MQ=255)

                                                                                                           tCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATaaa                                                            >  4:159589/1‑131 (MQ=255)

                                                                                                           tCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATaaa                                                            <  3:159589/131‑1 (MQ=255)

                                                                                                           tCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAAc                                          >  1:1699382/1‑149 (MQ=255)

                                                                                                             aaGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCataa                                                              >  1:558499/1‑124 (MQ=255)

                                                                                                             aaGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGa                                        >  4:381125/1‑149 (MQ=255)

                                                                                                             aaGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTCTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCataa                                                              <  2:558499/127‑4 (MQ=255)

                                                                                                                 aGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAAt                                              >  4:1877212/1‑139 (MQ=255)

                                                                                                                    tGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCAtt                                                  >  2:1136895/1‑132 (MQ=255)

                                                                                                                    tGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCAtt                                                  <  1:1136895/132‑1 (MQ=255)

                                                                                                                     gACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAAc                                <  3:131929/149‑1 (MQ=255)

                                                                                                                      aCCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATa                                                              >  4:725102/1‑118 (MQ=255)

                                                                                                                      aCCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATa                                                              <  3:725102/118‑1 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATTGCCTTTCCGGTGTGGTTTGGGCAGGACATCAGCAATGGCGCGCGCTAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGa                                        >  4:1804558/1‑138 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGttt                                                                        <  1:1640/106‑1 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGttt                                                                        >  2:1640/1‑106 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGaa                                               >  3:925200/1‑131 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGaa                                       >  4:1047541/1‑139 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGaa                                       <  3:1047541/139‑1 (MQ=255)

                                                                                                                        cGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGa                                        <  3:1804558/138‑1 (MQ=255)

                                                                                                                              acCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGt                                                                          >  4:121281/1‑98 (MQ=255)

                                                                                                                              acCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGt                                                                          <  3:121281/98‑1 (MQ=255)

                                                                                                                              acCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTc                                                                     >  3:747555/1‑103 (MQ=255)

                                                                                                                              acCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTc                                                                     <  4:747555/103‑1 (MQ=255)

                                                                                                                                cAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTCTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTaa                                           >  4:1557170/1‑127 (MQ=255)

                                                                                                                                 aGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGttttt                                                                      <  3:1880026/99‑1 (MQ=255)

                                                                                                                                 aGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGAcc                    <  4:547494/149‑1 (MQ=255)

                                                                                                                                 aGGTCACCACATGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGttttt                                                                      >  4:1880026/1‑99 (MQ=255)

                                                                                                                                        caccTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCcgcgc             <  3:381125/149‑1 (MQ=255)

                                                                                                                                           cTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGaa                                               <  2:1849206/112‑1 (MQ=255)

                                                                                                                                           cTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGaa                                               >  1:1849206/1‑112 (MQ=255)

                                                                                                                                           cTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATg                            >  2:1451411/1‑131 (MQ=255)

                                                                                                                                           cTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATg                            <  1:1451411/131‑1 (MQ=255)

                                                                                                                                             gACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGtt                                                                         <  2:929191/84‑1 (MQ=255)

                                                                                                                                             gACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGtt                                                                         >  1:929191/1‑84 (MQ=255)

                                                                                                                                                cATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGc                          >  1:1123427/1‑128 (MQ=255)

                                                                                                                                                   tACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAg  >  4:1640869/1‑149 (MQ=255)

TGGTCACGGAGGGTCGGGGCTGTAATTGCCACTTTTCCGGGACAATCGGCAAATCCGCAAGATTCCAGCGCGCATAGCGGCTGTCGTAGGCGTCTGGCTGCGCCTGCTCAAGCAGGTGACCGATACACCAGGTCACCACCTGACCATTACCGCACTCGATAAAGCCATCGCCTTTCCGGTGCGGTTTGGGCAGGACATCAGCAATGGCGCGCGCCAGACTCGGTTTTTCGGCAATAAACAACCGCATTGAATTAACGAATCTCAACCATGGCACGACCGCCGCGCGCTGGCACCAG  >  NC_000913/1846714‑1847009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.