BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3712860 =	189 (1.010)	216 (1.160)	123/238	NT	56.8%	coding (75/699 nt)	yhjY	autotransporter beta‑domain protein
*	?	NC_000913	= 3873341	139 (0.740)	216 (1.160)	123/238	NT	56.8%	coding (272/618 nt)	dgoA	2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase

Only 100 of 458 total aligned reads displayed.

TCCCAGCGCCCTTTGGCTACTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCATAGTAGCC  >  NC_000913/3712713‑3713008

ctttgatgtattgcggaccaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacga                                                                                                                                                     >  4:637826‑M1/148‑149 (MQ=255)

 tttgatgtattgcggaccaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacgag                                                                                                                                                    <  1:1879198‑M1/3‑1 (MQ=255)

 tttgatgtattgcggaccaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacgag                                                                                                                                                    <  2:1153589‑M1/3‑1 (MQ=255)

              ggaccaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCAc                                                                                                                                         >  2:638206‑M1/134‑147 (MQ=255)

               gCTACTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCAc                                                                                                                                         >  4:1719331/1‑146 (MQ=255)

               gCTACTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGa                                                                                                                                      <  4:774380/149‑1 (MQ=255)

                accaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGAt                                                                                                                                     <  3:1522983‑M1/18‑1 (MQ=255)

                accaaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGAt                                                                                                                                     <  3:1840860‑M1/18‑1 (MQ=255)

                  caaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTa                                                                                                                                   >  4:1840860‑M1/130‑149 (MQ=255)

                  caaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTa                                                                                                                                   >  1:1456963‑M1/130‑149 (MQ=255)

                  caaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTa                                                                                                                                   >  4:551606‑M1/130‑149 (MQ=255)

                  aCTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTa                                                                                                                                   <  2:990413/149‑1 (MQ=255)

                  aCTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTa                                                                                                                                   <  1:418292/149‑1 (MQ=255)

                   cTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCAc                                                                                                                                         >  3:646251/1‑142 (MQ=255)

                   cTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTAc                                                                                                                                  <  3:1401824/149‑1 (MQ=255)

                   aaaagccgatgacggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAg                                                                                                                                             <  1:805711‑M1/10‑1 (MQ=255)

                        aaTACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAgg                                                                                                                                            >  4:569656/1‑134 (MQ=255)

                              ttGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCca                                                                                                                       >  2:285110/1‑149 (MQ=255)

                                ggaaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCcagc                                                                                                                     <  1:567735‑M1/34‑1 (MQ=255)

                                  gACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGaaaaaa                                                                                                                                              <  2:1571030/122‑1 (MQ=255)

                                  gACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCt                                                                                                                            >  4:294361/1‑140 (MQ=255)

                                  aaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCcagcag                                                                                                                   >  4:1522983‑M1/114‑149 (MQ=255)

                                  aaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCcagcag                                                                                                                   <  1:329560‑M1/36‑1 (MQ=255)

                                  aaatattttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCcagca                                                                                                                    <  2:1642097‑M1/35‑1 (MQ=255)

                                    cAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCcagc                                                                                                                     <  3:280053/145‑1 (MQ=255)

                                      attttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCtt                                                                                                               <  3:240038‑M1/40‑1 (MQ=255)

                                       ttttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTa                                                                                                              <  2:837321‑M1/41‑1 (MQ=255)

                                        tttcagcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAg                                                                                                             <  3:523368‑M1/42‑1 (MQ=255)

                                             gcgcctgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTc                                                                                                                           <  4:20522‑M1/28‑1 (MQ=255)

                                                  tgcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGa                                                                                                   >  2:472909‑M1/98‑149 (MQ=255)

                                                   gcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGaaaaaa                                                                                                                                              >  1:1173434‑M1/97‑105 (MQ=255)

                                                   gcgcgcccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGac                                                                                                  >  3:1744982‑M1/97‑149 (MQ=255)

                                                    tCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCAc                                                                                                                               <  4:1578988/119‑1 (MQ=255)

                                                         ccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAg                                                                                                                                             <  3:578207‑M1/10‑1 (MQ=255)

                                                         ccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGc                                                                                            <  1:1831796‑M1/59‑1 (MQ=255)

                                                         ccgcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGc                                                                                            <  4:1657882‑M1/59‑1 (MQ=255)

                                                          tgatgaTCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTAc                                                                                                                                  <  1:292284/110‑1 (MQ=255)

                                                           gcttcgagcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtt                                                                                          <  1:1504424‑M1/61‑1 (MQ=255)

                                                              gatCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTAc                                                                                                                                  >  1:246354/1‑106 (MQ=255)

                                                               atCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttt                                                                                      <  1:127775/149‑1 (MQ=255)

                                                                  gcgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTa                                                                                   >  2:1504424‑M1/82‑149 (MQ=255)

                                                                   cgcggtaaaggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTAt                                                                                  <  3:18862‑M1/69‑1 (MQ=255)

                                                                        ccAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGAtt                                                                                                                                    <  3:74920/94‑1 (MQ=255)

                                                                        ccAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGacca                                                                                                >  2:173513/1‑130 (MQ=255)

                                                                        ccAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttttt                                                                                    >  4:1412942/1‑142 (MQ=255)

                                                                         cAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttttt                                                                                      <  4:1039363/139‑1 (MQ=255)

                                                                            gtgtAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTaa                                                                         <  2:709794/149‑1 (MQ=255)

                                                                            ggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACt                                                                                                                                        <  4:1259168‑M1/15‑1 (MQ=255)

                                                                                 aCGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGaaaaaa                                                                                                                                              >  1:759474/1‑75 (MQ=255)

                                                                                  ggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCAtt                                                                           >  4:94413‑M1/66‑141 (MQ=255)

                                                                                  cGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAaca                                                                       <  2:376715/145‑1 (MQ=255)

                                                                                    tcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGaccacc                                                                                              >  2:1797136‑M1/64‑120 (MQ=255)

                                                                                     tctGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAgg                                                                                                                                            >  1:1698995/1‑73 (MQ=255)

                                                                                         gtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGAt                                                                               >  3:1305186‑M1/59‑130 (MQ=255)

                                                                                            gcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAac                                                                        <  4:892495‑M1/79‑1 (MQ=255)

                                                                                                tCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTa                                                                                   >  4:1122764/1‑119 (MQ=255)

                                                                                                tCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTa                                                                                   <  3:1122764/119‑1 (MQ=255)

                                                                                                tCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                     <  1:134606/149‑1 (MQ=255)

                                                                                                agccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTaa                                                                         >  3:1045757‑M1/52‑129 (MQ=255)

                                                                                                agccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                     >  1:1750511‑M1/52‑149 (MQ=255)

                                                                                                   gggTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAaga                                                        <  3:953326/143‑1 (MQ=255)

                                                                                                      ttGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTc                                               <  2:1317795/149‑1 (MQ=255)

                                                                                                       tGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCg                                              <  2:1260352/149‑1 (MQ=255)

                                                                                                       gcagacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCg                                              <  1:486372‑M1/105‑1 (MQ=255)

                                                                                                        gCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCgg                                             <  4:747627/149‑1 (MQ=255)

                                                                                                         agacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAg                                                                                                             <  1:890559‑M1/42‑1 (MQ=255)

                                                                                                         agacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGa                                                                    <  4:1463379‑M1/83‑1 (MQ=255)

                                                                                                          gacggtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCa                                           <  3:1423351‑M1/108‑1 (MQ=255)

                                                                                                           tATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCaa                                          <  3:1472706/149‑1 (MQ=255)

                                                                                                             tCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAgg                                                             >  3:1667819/1‑128 (MQ=255)

                                                                                                              gtcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAatat                                       >  1:1583668‑M1/38‑149 (MQ=255)

                                                                                                               tcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCAc                                                                                                                                         >  1:714432‑M1/37‑50 (MQ=255)

                                                                                                               tcatgccgtagcccaccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGc                                                                                                            >  3:1720745‑M1/37‑79 (MQ=255)

                                                                                                                 cGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGc                                                                                                         >  3:90332/1‑80 (MQ=255)

                                                                                                                       atTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAt                              <  4:138810/149‑1 (MQ=255)

                                                                                                                        ttCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAaca                                                                       <  4:1318033/107‑1 (MQ=255)

                                                                                                                        ttCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAtt                             <  3:1648848/149‑1 (MQ=255)

                                                                                                                        ttCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTACTGTCAtt                             >  3:1213564/1‑149 (MQ=255)

                                                                                                                            caccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGcc                                                     >  4:252320‑M1/24‑121 (MQ=255)

                                                                                                                            caccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAtt                             >  3:181277‑M1/24‑145 (MQ=255)

                                                                                                                            caccgcacggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCAtt                             <  4:181277‑M1/122‑1 (MQ=255)

                                                                                                                             gttgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATg                        >  1:657985/1‑149 (MQ=255)

                                                                                                                               tgCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGaa                      <  2:1458147/149‑1 (MQ=255)

                                                                                                                                gCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAg                     <  2:1875099/149‑1 (MQ=255)

                                                                                                                                  cAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTa                                                                                   >  4:1773209/1‑85 (MQ=255)

                                                                                                                                    ggcggatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCtttt                                                                                        >  3:1340931‑M1/16‑78 (MQ=255)

                                                                                                                                      cGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATc               <  2:314250/149‑1 (MQ=255)

                                                                                                                                        gatcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCgg             <  2:213309‑M1/138‑1 (MQ=255)

                                                                                                                                         atcacttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAg                     >  4:411322‑M1/11‑140 (MQ=255)

                                                                                                                                          aGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTc                                               <  2:557894/113‑1 (MQ=255)

                                                                                                                                             tgtgTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGaa                                                          >  1:1024291/1‑99 (MQ=255)

                                                                                                                                              ttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGaa                                                  <  1:1130697‑M1/101‑1 (MQ=255)

                                                                                                                                              ttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGc                                            >  2:1401486‑M1/6‑112 (MQ=255)

                                                                                                                                              ttcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGc                                            <  1:1401486‑M1/107‑1 (MQ=255)

                                                                                                                                               tgtTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGa                   <  3:1557153/136‑1 (MQ=255)

                                                                                                                                               tcacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCAtagt      >  3:35856‑M1/5‑149 (MQ=255)

                                                                                                                                                cacGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCAtagta     <  4:714508‑M1/146‑1 (MQ=255)

                                                                                                                                                 acGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGat                  <  3:808059‑M1/133‑1 (MQ=255)

                                                                                                                                                   gagaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCg                                              >  2:754686/1‑105 (MQ=255)

                                                                                                                                                   gagaAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGaa                      >  2:1031367/1‑129 (MQ=255)

TCCCAGCGCCCTTTGGCTACTTTGAATACGTTGCGACAAAATATCGTTGTAATCAGGTTGATGATCACTATCCCAGGTGTAACGCTCTGTGGAAAGTCCGGGTTGCGTATCAACGATATATTCTTGTTGCCAGGCGTAAGCTGTGTTGAGAAAAAAGGCACTGATTACCACGCTCGCCAGCAGGCTTAGCTGCCAGCGACCACCGCTTTTTTTTATGATCATTAACACGACTCCAGGGAAGAGCCGAATTCGGCAATATTATTGTCATTGTATGAAGGATATCGGGCATAGTAGCC  >  NC_000913/3712713‑3713008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.