BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3938307	138 (0.740)	11 (0.060)	11/222	NT	7.6%	coding (81/993 nt)	rbsR	transcriptional repressor of ribose metabolism
*	?	NC_000913	= 3938313	139 (0.800)	11 (0.060)	11/222	NT	7.6%	coding (87/993 nt)	rbsR	transcriptional repressor of ribose metabolism

Only 100 of 185 total aligned reads displayed.

AGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGA  >  NC_000913/3938160‑3938453

aGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCg                                                                                                                                                   >  4:559178/1‑149 (MQ=255)

aGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGAGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCg                                                                                                                                                   >  3:397478/1‑149 (MQ=255)

  gcgcACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTc                                                                                                                                                 >  3:1485055/1‑149 (MQ=255)

   cgcACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGAGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCa                                                                                                                                                <  4:397478/149‑1 (MQ=255)

        aaCCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTgaa                                                                                                                                           <  1:1028405‑M2/149‑4 (MQ=255)

          ccTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCactgacgaagc                                                                                                                                         >  4:1007305‑M1/1‑138 (MQ=255)

            ttCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTgaagcga                                                                                                                                       >  3:1829501‑M2/1‑142 (MQ=255)

              ccGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCactgacgaagcgatc                                                                                                                                     <  3:81217‑M1/149‑16 (MQ=255)

                      tGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCaa                                                                                                                             >  1:1546546/1‑149 (MQ=255)

                             aaGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGaa                                                                                                                      <  3:559178/149‑1 (MQ=255)

                                 gaTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcgg                                                                                                                  <  2:50003/149‑1 (MQ=255)

                                  aTCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAGGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcggc                                                                                                                 >  3:812519/1‑149 (MQ=255)

                                   tCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcgg                                                                                                                  >  2:508174/1‑147 (MQ=255)

                                   tCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcgg                                                                                                                  <  1:508174/147‑1 (MQ=255)

                                     gACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTg                                                                                                                        >  1:814100/1‑139 (MQ=255)

                                     gACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGAt                                                                                                              <  4:1485055/149‑1 (MQ=255)

                                         cATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCactgacgaagcg                                                                                                                                        >  1:1272088‑M1/1‑107 (MQ=255)

                                         cATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaaa                                                                                                          <  4:1026367/149‑1 (MQ=255)

                                                 gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  <  1:1063054/149‑1 (MQ=255)

                                                 gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  <  2:1028405/149‑1 (MQ=255)

                                                 gACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  <  3:598159/149‑1 (MQ=255)

                                                      gCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTC                                                                                                                                                    <  1:1337080‑M1/94‑1 (MQ=255)

                                                       cAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAcgc                                                                                            >  4:655932/1‑149 (MQ=255)

                                                              gACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAg                                                                                                                     >  1:726919/1‑117 (MQ=255)

                                                                 gCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGaa                                                                                                       >  3:970177/1‑128 (MQ=255)

                                                                          cAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGt                                                                         >  3:669505/1‑149 (MQ=255)

                                                                            aTGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAg                                                                       <  1:1571920/149‑1 (MQ=255)

                                                                             tGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAgcggc                                                                                                                 >  2:1635462/1‑106 (MQ=255)

                                                                              gAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCactgacgaagcgatcttta                                                                                                                                 <  2:742178‑M1/89‑20 (MQ=255)

                                                                              gAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTAcgc                                                                                            >  2:827667/1‑126 (MQ=255)

                                                                                 aGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCactgacgaagcga                                                                                                                                       <  2:1751852‑M1/80‑14 (MQ=255)

                                                                                 aGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTa                                                                                               >  3:1055450/1‑120 (MQ=255)

                                                                                  gATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGc                                                                                                                                >  3:507210/1‑86 (MQ=255)

                                                                                  gATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGc                                                                                                                                <  4:507210/86‑1 (MQ=255)

                                                                                     gTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTg                                                                                                                        >  2:1068498/1‑91 (MQ=255)

                                                                                      acgCCCGCCAGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGc                                                                      <  2:478153/138‑1 (MQ=255)

                                                                                      acgCCCGCCAGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGc                                                                      >  1:478153/3‑140 (MQ=255)

                                                                                               tGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  >  2:585360/1‑103 (MQ=255)

                                                                                               tGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  <  1:585360/103‑1 (MQ=255)

                                                                                                 gcgggcgTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaaa                                                                                                          >  1:83049/1‑93 (MQ=255)

                                                                                                  cgggcgTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGctct                                                                                >  4:780391/1‑118 (MQ=255)

                                                                                                   gggcgTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCATACACATa                                                <  3:1793193/149‑1 (MQ=255)

                                                                                                            tACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACtca                                                            <  4:864736/128‑1 (MQ=255)

                                                                                                             aCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGc                                                                      >  1:223886/1‑117 (MQ=255)

                                                                                                               cTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGt                                    >  2:27278/1‑149 (MQ=255)

                                                                                                               cTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGt                                    >  2:991935/1‑149 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  <  4:1111446/86‑1 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACgcgc                                                                                          >  1:70766/1‑94 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACgcgc                                                                                          <  2:70766/94‑1 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATc                                                                                      <  1:813412/98‑1 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATc                                                                                      >  2:813412/1‑98 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTg                                                                               <  2:600216/105‑1 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTg                                                                               >  1:600216/1‑105 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAg                                                                       <  2:1557706/113‑1 (MQ=255)

                                                                                                                tCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGtt                                   >  3:1122082/1‑149 (MQ=255)

                                                                                                                tCAACAGTTTCGCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCaa                                                                                                  >  3:1111446/1‑86 (MQ=255)

                                                                                                                    cAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATc                               >  4:637828/1‑149 (MQ=255)

                                                                                                                         tctcACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACtcaaa                                                          <  1:1755891/117‑2 (MQ=255)

                                                                                                                           tcACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCa                                       <  3:810809/134‑1 (MQ=255)

                                                                                                                           tcACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCa                        >  1:666688/1‑149 (MQ=255)

                                                                                                                               gTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTAc                    <  1:27278/149‑1 (MQ=255)

                                                                                                                                ttATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGcc                                                                     >  2:547584/1‑99 (MQ=255)

                                                                                                                                ttATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATCAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGcc                                                                     <  1:547584/99‑1 (MQ=255)

                                                                                                                                 tATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGt                                    >  4:811087/1‑131 (MQ=255)

                                                                                                                                    cAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATc               <  1:11085/149‑1 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGGGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACt                                                                                                     <  4:1597623/61‑1 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGaa                                                                                                                      <  1:1517246/44‑1 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGaa                                                                                                                      >  2:1517246/1‑44 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTAc                    >  3:636449/1‑142 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTAc                    <  4:636449/142‑1 (MQ=255)

                                                                                                                                      aTAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCt             >  4:1894825/1‑149 (MQ=255)

                                                                                                                                       tAAAGATCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttc                                                                        >  1:742178‑M2/1‑19 (MQ=255)

                                                                                                                                       tAAAGATCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttc                                                                        <  2:742178‑M2/89‑71 (MQ=255)

                                                                                                                                       tAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCa                        <  3:1682535/137‑1 (MQ=255)

                                                                                                                                       tAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCa                        >  4:1682535/1‑137 (MQ=255)

                                                                                                                                       tAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCa                        <  1:1715583/137‑1 (MQ=255)

                                                                                                                                         aaGATCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttga                                                                                                          >  2:1521912‑M2/1‑17 (MQ=255)

                                                                                                                                         aaGATCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttga                                                                                                          <  1:1521912‑M2/53‑37 (MQ=255)

                                                                                                                                         aaGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTc          <  2:666688/149‑1 (MQ=255)

                                                                                                                                          aGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCaaa                                                      <  3:1620702/104‑1 (MQ=255)

                                                                                                                                          aGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCaaa                                                      >  4:1620702/1‑104 (MQ=255)

                                                                                                                                           gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaa                                                                                                           >  3:1296453/1‑50 (MQ=255)

                                                                                                                                           gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTaa                                                                                                           <  4:1296453/50‑1 (MQ=255)

                                                                                                                                           gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGa                                                                                                        >  1:1430569/1‑53 (MQ=255)

                                                                                                                                           gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGc                          >  2:1359444/1‑131 (MQ=255)

                                                                                                                                           gATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTa        <  2:111091/149‑1 (MQ=255)

                                                                                                                                            aTCGCTTCactgacgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacgga       >  2:935853‑M1/1‑8 (MQ=255)

                                                                                                                                            aTCGCTTCactgacgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacgga       >  3:952224‑M1/1‑8 (MQ=255)

                                                                                                                                            aTCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacgga       <  3:1007305‑M2/149‑136 (MQ=255)

                                                                                                                                             tCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatct                                                                           >  1:1751852‑M2/1‑13 (MQ=255)

                                                                                                                                             tCGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatct                                                                           <  2:1751852‑M2/80‑68 (MQ=255)

                                                                                                                                              cGCTTCGTCAGTgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatg                                   <  2:1272088‑M2/119‑108 (MQ=255)

                                                                                                                                               gCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCaaa                                                      <  2:144561/99‑1 (MQ=255)

                                                                                                                                               gCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCaaa                                                      >  1:144561/1‑99 (MQ=255)

                                                                                                                                                 ttCactgacgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacggaaggtt  <  2:260588‑M1/149‑147 (MQ=255)

                                                                                                                                                 ttCactgacgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacggaaggtt  <  1:1028405‑M1/149‑147 (MQ=255)

                                                                                                                                                 ttCactgacgaagcgatctttattgataacgtgagaaactgttgaggtagaaacgcccgccaggcgggcaacatctttcattgtagccaagcgtcacctctgcctgtctaaaaatgcgtcgatctcttcacgccacggtacggaaggtt  >  4:720349‑M1/1‑3 (MQ=255)

                                                                                                                                                 ttCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCa                              <  2:1802417/121‑1 (MQ=255)

                                                                                                                                                 ttCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGa  >  3:371015/1‑149 (MQ=255)

                                                                                                                                                 ttCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGACCACTGCCAGTACCAATCCTTTCTATTCAGa  >  2:1421126/1‑149 (MQ=255)

AGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGA  >  NC_000913/3938160‑3938453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.