New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3999519234 (1.250)13 (0.070) 11/224 NT 5.2% coding (1537/2163 nt) uvrD DNA‑dependent ATPase I and helicase II
?NC_000913 = 3999532 258 (1.470)coding (1550/2163 nt) uvrD DNA‑dependent ATPase I and helicase II

Only 100 of 307 total aligned reads displayed.

TTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACTCGGC  >  NC_000913/3999372‑3999667
                                                                                                                                                   |                                                                                                                                                    
 tAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTg                                                                                                                                                    <  3:309288/149‑1 (MQ=255)
   aTCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGcgcg                                                                                                                                                  >  4:363631‑M1/1‑145 (MQ=255)
   aTCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGAc                                                                                                                                                  >  2:186343/1‑149 (MQ=255)
    tCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGAc                                                                                                                                                  <  4:519080/148‑1 (MQ=255)
    tCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGAc                                                                                                                                                  >  3:519080/1‑148 (MQ=255)
      gACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGcgcgttg                                                                                                                                               >  1:1795705‑M1/1‑142 (MQ=255)
            ttAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAAcgcg                                                                                                                                         >  4:686462/1‑149 (MQ=255)
               gcgcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGcca                                                                                                                                      >  2:944848‑M2/1‑146 (MQ=255)
               gcgcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGAAACTGGTGACg                                                                                                                                                 <  1:1528242/138‑1 (MQ=255)
                cgcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACg                                                                                                                                                 >  1:1693494/1‑137 (MQ=255)
                cgcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGccag                                                                                                                                     <  2:1265305‑M2/149‑5 (MQ=255)
                 gcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGTGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGccagt                                                                                                                                    <  4:454172‑M2/149‑6 (MQ=255)
                 gcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGcgcgttgccgtcaccagt                                                                                                                                    >  2:1194089‑M1/1‑131 (MQ=255)
                 gcAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGcgcgttgccgtcaccagt                                                                                                                                    <  2:1795705‑M1/149‑19 (MQ=255)
                     gAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAg                                                                                                                                <  1:186343/149‑1 (MQ=255)
                       aaCTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGt                                                                                                                                                     >  2:1674956/1‑126 (MQ=255)
                          tGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACa                                                                                                                           >  3:1038340/1‑149 (MQ=255)
                           gCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACaa                                                                                                                          <  2:772295/149‑1 (MQ=255)
                               atatGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACgaa                                                                                                                      <  2:354615/149‑1 (MQ=255)
                                    ccGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAagaaga                                                                                                                 <  3:264075/149‑1 (MQ=255)
                                       cTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGa                                                                                                              >  2:1594991/1‑149 (MQ=255)
                                         gCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAg                                                                                                            <  3:1503544/149‑1 (MQ=255)
                                           aTGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGAt                                                                                                          >  4:1486004/1‑149 (MQ=255)
                                           aTGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGAt                                                                                                          <  1:1594991/149‑1 (MQ=255)
                                              tACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGcgcgttgccgtcaccagttcctctaa                                                                                                                            >  3:471428‑M1/1‑102 (MQ=255)
                                               aCAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTaa                                                                                                      <  1:73203/149‑1 (MQ=255)
                                                      gACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCt                                                                                               <  1:854528/149‑1 (MQ=255)
                                                         cGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGTGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCa                                                                                            >  2:557707/1‑149 (MQ=255)
                                                          gggTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGa                                                                                                              <  3:1558049/130‑1 (MQ=255)
                                                          gggTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGa                                                                                                              >  4:1558049/1‑130 (MQ=255)
                                                            gTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGc                                                                                                                                               <  4:81016/95‑1 (MQ=255)
                                                                ttAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTa                                                                                                                             <  1:1654193/109‑1 (MQ=255)
                                                                ttAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACgaa                                                                                                                      <  2:1120250/116‑1 (MQ=255)
                                                                ttAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTc                                                                                     >  3:1473207/1‑149 (MQ=255)
                                                                   aaGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGTTCAGACGCGTATGGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCctc                                                                                  >  4:1391805/1‑149 (MQ=255)
                                                                   aaGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCctc                                                                                  >  2:1238946/1‑149 (MQ=255)
                                                                     gACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCtctc                                                                                >  4:1626936/1‑149 (MQ=255)
                                                                       cTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTg                                                                                              <  2:414333/133‑1 (MQ=255)
                                                                        tCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGGCGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTGCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCa                                                                             >  4:1803145/1‑149 (MQ=255)
                                                                        tCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCa                                                                             >  2:293426/1‑149 (MQ=255)
                                                                          cGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATg                                                                           >  4:1152270/1‑149 (MQ=255)
                                                                           ggCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGc                                                                                                                                        >  3:477059‑M2/1‑86 (MQ=255)
                                                                             ccTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTc                                                                                     <  3:646311/136‑1 (MQ=255)
                                                                             ccTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTc                                                                                     >  4:646311/1‑136 (MQ=255)
                                                                             ccTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCgg                                                                        <  1:231805/149‑1 (MQ=255)
                                                                              cTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTcc                                                                               <  2:707410/141‑1 (MQ=255)
                                                                                gCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCAc                                                                     <  3:1626936/149‑1 (MQ=255)
                                                                                     ccATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACgaagaa                                                                                                                   <  3:1114552/98‑1 (MQ=255)
                                                                                      cATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACgaagaa                                                                                                                   >  1:678347/1‑97 (MQ=255)
                                                                                      cATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTaa                                                                                                      >  2:680354/1‑110 (MQ=255)
                                                                                       aTGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTATTGCCGCTGCAGGCGTTCCTCTGCCATGCGGCACTGGAAGc                                                              <  1:548136/149‑1 (MQ=255)
                                                                                       aTGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCa                                                                             >  1:368626/1‑134 (MQ=255)
                                                                                         gTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAg                                                            <  3:1391805/149‑1 (MQ=255)
                                                                                           aTGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGt                                                          <  1:1238946/149‑1 (MQ=255)
                                                                                              aGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAg                                                            <  1:1267250/144‑1 (MQ=255)
                                                                                               gCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAg                                                      >  4:593378/1‑149 (MQ=255)
                                                                                                  ggAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGc                                                   >  3:1718328/1‑149 (MQ=255)
                                                                                                     gaAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAgg                                                <  3:593378/149‑1 (MQ=255)
                                                                                                            gAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGc                                                                                         <  2:1717031/101‑1 (MQ=255)
                                                                                                            gAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAgg                                                           >  2:1635248/1‑131 (MQ=255)
                                                                                                            gAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATAc                                         >  1:46834/1‑149 (MQ=255)
                                                                                                            gAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATAc                                         <  1:648295/149‑1 (MQ=255)
                                                                                                             aaaaaGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAg                                                            <  3:1648659/129‑1 (MQ=255)
                                                                                                             aaaaaGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAg                                                            >  4:1648659/1‑129 (MQ=255)
                                                                                                             aaaaaGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGa                                            <  2:934951/145‑1 (MQ=255)
                                                                                                                  ggTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCa                                   >  4:243088/1‑149 (MQ=255)
                                                                                                                  ggTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCa                                   >  1:174262/1‑149 (MQ=255)
                                                                                                                   gTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAg                                  <  2:1354017/149‑1 (MQ=255)
                                                                                                                            gTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGc                                                                                                   <  2:641974/75‑1 (MQ=255)
                                                                                                                            gTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGc                                                                                                   <  4:1524043/75‑1 (MQ=255)
                                                                                                                              aTCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCa                       <  1:774817/149‑1 (MQ=255)
                                                                                                                               tCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTcc                                                                                    >  1:116124/1‑87 (MQ=255)
                                                                                                                               tCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTcc                                                                                    <  2:116124/87‑1 (MQ=255)
                                                                                                                                 gAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCtctc                                                                                <  1:1009715/89‑1 (MQ=255)
                                                                                                                                 gAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGtt                    >  3:1385784/1‑149 (MQ=255)
                                                                                                                                 gAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGtt                    >  1:585607/1‑149 (MQ=255)
                                                                                                                                 gAAAACTGAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCtctc                                                                                >  2:1009715/1‑89 (MQ=255)
                                                                                                                                  aaaaCTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTtg                   <  3:1803145/149‑1 (MQ=255)
                                                                                                                                     aCTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGc                                               >  4:1050129/1‑118 (MQ=255)
                                                                                                                                      cTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGTAGGCGGATACCTGGCAGGATGCGGTGCAGTtgatga               <  4:1104005/149‑1 (MQ=255)
                                                                                                                                      cTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTtgatga               <  4:1718328/149‑1 (MQ=255)
                                                                                                                                       ttAGAGGAACTGGTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtctttaattacccggtcagtctgtacatgcagcggcatatcggcag              <  1:1194089‑M2/149‑124 (MQ=255)
                                                                                                                                       ttAGAGGAACTGGTGACGGCAACGCGCCAGTTCGGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGAc              >  3:1199696/1‑149 (MQ=255)
                                                                                                                                       ttAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTtgat                 <  3:1415249/146‑1 (MQ=255)
                                                                                                                                       ttAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTtgat                 >  4:1415249/1‑146 (MQ=255)
                                                                                                                                           agGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTa          >  3:792132/1‑149 (MQ=255)
                                                                                                                                            ggAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTac         >  3:911235/1‑149 (MQ=255)
                                                                                                                                             gAACTGGTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtc                                                          >  1:701939‑M2/1‑20 (MQ=255)
                                                                                                                                             gAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTtga                  >  4:1372707/1‑139 (MQ=255)
                                                                                                                                             gAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTaca        >  4:118635/1‑149 (MQ=255)
                                                                                                                                              aaCTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTacac       >  3:684079/1‑149 (MQ=255)
                                                                                                                                               aCTGGTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtctttaattacccggtcagtctgtacatgcagcggcatatcggcagtttcctgc      <  3:363631‑M2/149‑132 (MQ=255)
                                                                                                                                               aCTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACt      >  3:1094052/1‑149 (MQ=255)
                                                                                                                                                cTGGTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtctttaattacccggtcagtctgtac                                  <  4:1429922‑M2/120‑104 (MQ=255)
                                                                                                                                                cTGGTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtctttaattacccggtcagtctgtac                                  >  3:1429922‑M2/1‑17 (MQ=255)
                                                                                                                                                 tGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACTCg    >  1:987317/1‑149 (MQ=255)
                                                                                                                                                   gcgcgttgccgtcaccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccggagtctttaattacccggtcagtctgtacatgcagcggcatatcggcagtttcctgcgcta  >  1:322243‑M1/1‑1 (MQ=255)
                                                                                                                                                   gcgcgttgccgtcaccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggcc                                                                <  4:477059‑M1/87‑87 (MQ=255)
                                                                                                                                                   gTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccgga                                                             <  4:396098‑M2/90‑77 (MQ=255)
                                                                                                                                                   gTGACGGCAACGCGccagttcctctaagttttcgatacgcgtctgacctttttcgcccttctcctgctcatacatggtacgcaggccgga                                                             >  3:396098‑M2/1‑14 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACTCGGC  >  NC_000913/3999372‑3999667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.