BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 127796	78 (0.420)	10 (0.060)	8/230	NT	11.2%	intergenic (+209/‑116)	aceF/lpd	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2/dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase
*	?	NC_000913	= 127837	83 (0.460)	10 (0.060)	8/230	NT	11.2%	intergenic (+250/‑75)	aceF/lpd	pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2/dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase

Only 100 of 104 total aligned reads displayed.

TTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCTTCC  >  NC_000913/127693‑127981

ttAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAg                                                                                                                                                  >  2:1284240/1‑145 (MQ=255)

ttAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAg                                                                                                                                                  <  1:1284240/145‑1 (MQ=255)

       ttttGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCt                                                                                                                                       <  3:719677/149‑1 (MQ=255)

               aaTACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTg                                                                                                                                            <  3:353194/136‑1 (MQ=255)

               aaTACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTg                                                                                                                                            >  4:353194/1‑136 (MQ=255)

                     gACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGc                                                                                                                         <  1:1257264/149‑1 (MQ=255)

                                  aCCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGaa                                                                                                                                          <  3:1523214/119‑1 (MQ=255)

                                  aCCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGaa                                                                                                                                          >  4:1523214/1‑119 (MQ=255)

                                                     aTTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGt                                                                                                         >  3:382986/1‑133 (MQ=255)

                                                     aTTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGt                                                                                                         <  4:382986/133‑1 (MQ=255)

                                                       tACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATaaa                                                                                       >  2:1274204/1‑149 (MQ=255)

                                                          ttCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCgg                                                                                                                          <  4:575289/111‑1 (MQ=255)

                                                          ttCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCgg                                                                                                                          >  3:575289/1‑111 (MQ=255)

                                                               aTACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATaga                                                                               >  1:675159/1‑149 (MQ=255)

                                                               aTACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATaga                                                                               >  2:1620956/1‑149 (MQ=255)

                                                                     tATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTc                                                                           <  1:128318/147‑1 (MQ=255)

                                                                     tATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTc                                                                           >  2:128318/1‑147 (MQ=255)

                                                                     tATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCat                                                                         >  4:1206666/1‑149 (MQ=255)

                                                                       tGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatga                                                                       >  4:345781/1‑149 (MQ=255)

                                                                          aTTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGaa                                                                                                                                          <  3:107707/79‑1 (MQ=255)

                                                                          aTTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGaa                                                                                                                                          >  4:107707/1‑79 (MQ=255)

                                                                          aTTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCAtgatga                                                                    <  3:984226/149‑1 (MQ=255)

                                                                          aTTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCAtgatga                                                                    >  3:885625/1‑149 (MQ=255)

                                                                             tCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTa                                                                 <  4:885625/149‑1 (MQ=255)

                                                                                      agcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     <  1:1003126/120‑1 (MQ=255)

                                                                                      agcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     >  2:1003126/1‑120 (MQ=255)

                                                                                      agcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatga                                                                       <  4:802023/134‑1 (MQ=255)

                                                                                       gcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgtgaagctaacgccgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggt                                                          <  4:185313‑M2/146‑89 (MQ=255)

                                                                                       gcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgtgaagctaacgccgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggt                                                          >  3:1340577‑M2/1‑58 (MQ=255)

                                                                                       gcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgtgaagctaacgccgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggt                                                          <  4:1340577‑M2/146‑89 (MQ=255)

                                                                                       gcaAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgtgaagctaacgccgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggt                                                          >  3:185313‑M2/1‑58 (MQ=255)

                                                                                         aaGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaaa                                                     <  2:675159/149‑1 (MQ=255)

                                                                                         aaGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaaa                                                     <  1:1620956/149‑1 (MQ=255)

                                                                                           ggTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGa                                                                                                                     <  4:1419205/83‑1 (MQ=255)

                                                                                           ggTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGa                                                                                                                     >  3:1419205/1‑83 (MQ=255)

                                                                                            gTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTc                                                  <  3:1206666/149‑1 (MQ=255)

                                                                                                 aaGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgcttgctaccttgctgcacccagaaatccata                                                                                                               <  2:1283177‑M2/83‑36 (MQ=255)

                                                                                                 aaGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgcttgctaccttgctgcacccagaaatccata                                                                                                               >  1:1283177‑M2/1‑48 (MQ=255)

                                                                                                  aGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGcc                                                                                                                        >  3:1164935/1‑73 (MQ=255)

                                                                                                  aGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGCGTTAGGGCGTGAAGCTAACGCCGCTGCGGcc                                                                                                                        <  4:1164935/73‑1 (MQ=255)

                                                                                                   gcgcCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGt                                           <  1:1274204/149‑1 (MQ=255)

                                                                                                     gcCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCa                                                 >  1:945978/1‑141 (MQ=255)

                                                                                                     gcCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTg                                          <  1:1178752/148‑1 (MQ=255)

                                                                                                     gcCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTg                                          >  2:1178752/1‑148 (MQ=255)

                                                                                                      ccAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATGTATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGt                                        >  1:264011/1‑149 (MQ=255)

                                                                                                       cAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTa                                       >  2:1221686/1‑149 (MQ=255)

                                                                                                        aGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAat                                                                                      <  1:1023420/101‑1 (MQ=255)

                                                                                                        aGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAat                                                                                      >  2:1023420/1‑101 (MQ=255)

                                                                                                        aGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATGTATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTAc                                      <  2:264011/149‑1 (MQ=255)

                                                                                                         gAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgcttgctaccttgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggtattttacaaaattgttaacaatt                                     <  2:709763‑M2/149‑110 (MQ=255)

                                                                                                         gAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaaa                                                     >  1:667758/1‑133 (MQ=255)

                                                                                                         gAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaaa                                                     <  2:667758/133‑1 (MQ=255)

                                                                                                          aaTCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACtt                                    <  3:345781/149‑1 (MQ=255)

                                                                                                            tCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatgat                                                                      >  2:78169/1‑113 (MQ=255)

                                                                                                            tCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatgat                                                                      <  1:78169/113‑1 (MQ=255)

                                                                                                            tCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTgg                                  >  4:197493/1‑149 (MQ=255)

                                                                                                               ccAGGAGCTTACATAAGTAAGTGACTGGGGTGAGggcgcttgctaccttgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggtattttacaaaattgttaacaatttttaaa                               >  1:709763‑M2/1‑34 (MQ=255)

                                                                                                               ccAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCAtgatga                                                                    >  1:258874/1‑112 (MQ=255)

                                                                                                               ccAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCAtgatga                                                                    <  2:258874/112‑1 (MQ=255)

                                                                                                               ccAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTggg                                 >  3:1437527/1‑147 (MQ=255)

                                                                                                               ccAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTggg                                 <  4:1437527/147‑1 (MQ=255)

                                                                                                                cAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACgg                                                                                                           >  4:1204706/1‑72 (MQ=255)

                                                                                                                cAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACgg                                                                                                           <  3:1204706/72‑1 (MQ=255)

                                                                                                                cAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGga                                                                                             >  4:1744441/1‑86 (MQ=255)

                                                                                                                cAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGga                                                                                             <  3:1744441/86‑1 (MQ=255)

                                                                                                                 aGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGAccgc                                                                                                 >  3:105691/1‑81 (MQ=255)

                                                                                                                 aGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGAccgc                                                                                                 <  4:105691/81‑1 (MQ=255)

                                                                                                                   gAGCTTACATAAGTAAGTGACTGGGGTGAGggcgtgaagctaccttgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggtattttacaaaattgttaacaatttttaaacaa                           <  1:1078765‑M2/149‑120 (MQ=255)

                                                                                                                     gCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGccc                         >  3:198897/1‑149 (MQ=255)

                                                                                                                       ttACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAg                                                <  4:1432179/124‑1 (MQ=255)

                                                                                                                       ttACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAg                                                >  3:1432179/1‑124 (MQ=255)

                                                                                                                         aCATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatga                                                                       >  2:177031/1‑99 (MQ=255)

                                                                                                                         aCATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCatga                                                                       <  1:177031/99‑1 (MQ=255)

                                                                                                                           aTAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     <  2:472456/83‑1 (MQ=255)

                                                                                                                           aTAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     >  1:472456/1‑83 (MQ=255)

                                                                                                                           aTAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     >  1:999158/1‑83 (MQ=255)

                                                                                                                           aTAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAata                                                                                     <  2:999158/83‑1 (MQ=255)

                                                                                                                           aTAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAgg                   >  1:731446/1‑149 (MQ=255)

                                                                                                                            taagtaagTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTg                                          <  1:36705/125‑1 (MQ=255)

                                                                                                                            taagtaagTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTg                                          >  2:36705/1‑125 (MQ=255)

                                                                                                                            taagtaagTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGt                  <  2:731446/149‑1 (MQ=255)

                                                                                                                             aagtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAgg                                               <  3:161807/119‑1 (MQ=255)

                                                                                                                             aagtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAgg                                               >  4:161807/1‑119 (MQ=255)

                                                                                                                              agtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTAc                                                                <  4:1201540/101‑1 (MQ=255)

                                                                                                                              agtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTAc                                                                >  3:1201540/1‑101 (MQ=255)

                                                                                                                               gtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGcc                          <  3:1624055/138‑1 (MQ=255)

                                                                                                                               gtaagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGcc                          >  4:1624055/1‑138 (MQ=255)

                                                                                                                                taagtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACt              >  1:376650/1‑149 (MQ=255)

                                                                                                                                  agtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTgg                                  <  1:1278755/127‑1 (MQ=255)

                                                                                                                                  agtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTgg                                  >  2:1278755/1‑127 (MQ=255)

                                                                                                                                  agtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTcc            >  1:79020/1‑149 (MQ=255)

                                                                                                                                   gtGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAg                    >  2:831980/1‑140 (MQ=255)

                                                                                                                                    tGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGc          >  3:277509/1‑149 (MQ=255)

                                                                                                                                      aCTGGGGTGAGggcgtgaagctaccttgctgcacccagaaatccatagggtatgtgaagtaataccctaaccaccaccgggtcgttctatccgtcggtattttacaaaattgttaacaatttttaaacaacaaacggcaaccgatttgt        >  2:1078765‑M2/1‑11 (MQ=255)

                                                                                                                                        tGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGaa                                                            >  3:418261/1‑95 (MQ=255)

                                                                                                                                        tGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGaa                                                            <  4:418261/95‑1 (MQ=255)

                                                                                                                                          gggTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCtt    >  1:1039663/1‑149 (MQ=255)

                                                                                                                                            gTGAGGGCGTGAAGCTAACGCCGCCGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCTTct  >  3:680193/1‑148 (MQ=255)

                                                                                                                                                gggCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaa                                                      >  1:243671/1‑93 (MQ=255)

                                                                                                                                                gggCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCaaa                                                      <  2:243671/93‑1 (MQ=255)

TTAACAATTTTGTAAAATACCGACGGATAGAACGACCCGGTGGTGGTTAGGGTATTACTTCACATACCCTATGGATTTCTGGGTGCAGCAAGGTAGCAAGCGCCAGAATCCCCAGGAGCTTACATAAGTAAGTGACTGGGGTGAGGGCGTGAAGCTAACGCCGCTGCGGCCTGAAAGACGACGGGTATGACCGCCGGAGATAAATATATAGAGGTCATGATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCTTCC  >  NC_000913/127693‑127981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.