BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	277707 =	NA (NA)	6 (0.030)	6/224	NT	5.4%	noncoding (33/67 nt)	REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	277738 =	106 (0.600)	6 (0.030)	6/224	NT	5.4%	noncoding (64/67 nt)	REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

TGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCATT  >  NC_000913/277597‑277877

tGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                                                                                      <  4:146014/149‑1 (MQ=255)

         accacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAAc                                                                                                                             >  3:1019446/1‑149 (MQ=255)

          ccacGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACg                                                                                                                            >  4:344789/1‑149 (MQ=255)

                    ccggacgtcggcgagcagtattatcttgaaatccatccgtacggcatgtttgttctggcggatgcggcataacgttttgtggttttgtagGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                                                             <  4:1418591‑M1/32‑1 (MQ=255)

                              gcgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaa                                                                                                        >  4:435096/1‑149 (MQ=255)

                              gcgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaa                                                                                                        >  1:158092/1‑149 (MQ=255)

                               cgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                                                                                                    >  2:661923/1‑136 (MQ=255)

                               cgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCa                                                                                                           >  4:266917/1‑145 (MQ=255)

                               cgTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCa                                                                                                           <  3:266917/145‑1 (MQ=255)

                                     gtattatcttgaaatccatccgtacggcatgtttgttctggcggatgcggcataacgttttgtggttttgtagGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                                                                                            >  3:1034012‑M1/74‑106 (MQ=255)

                                     gtattatcttgaaatccatccgtacggcatgtttgttctggcggatgcggcataacgttttgtggttttgtagGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                                                                                            <  4:1034012‑M1/33‑1 (MQ=255)

                                     aaGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGc                                                                                                                   >  2:358026/1‑131 (MQ=255)

                                     aaGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGc                                                                                                                   >  2:405340/1‑131 (MQ=255)

                                     aaGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGc                                                                                                                   <  1:405340/131‑1 (MQ=255)

                                       gcgcGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                                                                                               <  1:674513/149‑1 (MQ=255)

                                          cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                                                                                            <  4:1019446/149‑1 (MQ=255)

                                           gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTa                                                                                           <  3:1405459/149‑1 (MQ=255)

                                              gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg                                                                                        >  2:1720173/1‑149 (MQ=255)

                                                tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaa                                                                                                        >  4:1226073/1‑131 (MQ=255)

                                                tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaa                                                                                                        <  3:1226073/131‑1 (MQ=255)

                                                tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggat                                                                                      <  1:432058/149‑1 (MQ=255)

                                                 gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg                                                                                     <  2:158092/149‑1 (MQ=255)

                                                   gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTa                                                                                                                         >  3:1780065/1‑111 (MQ=255)

                                                   gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGcc                                                                                              <  1:198257/138‑1 (MQ=255)

                                                             ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                                                         >  1:1833771/1‑149 (MQ=255)

                                                              gTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataa                                                                        <  2:1426543/149‑1 (MQ=255)

                                                                  aCATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                                                           >  3:1267725/1‑142 (MQ=255)

                                                                  aCATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                                                           <  4:1267725/142‑1 (MQ=255)

                                                                   cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTg                                                                   <  2:1833771/149‑1 (MQ=255)

                                                                    aTCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTg                                                                   <  2:1539638/148‑1 (MQ=255)

                                                                    aTCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTg                                                                   >  1:1539638/1‑148 (MQ=255)

                                                                    aTCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGc                                                                  >  1:677031/1‑149 (MQ=255)

                                                                       gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt                                                                                <  1:369565/132‑1 (MQ=255)

                                                                       gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAttt                                                                                >  2:369565/1‑132 (MQ=255)

                                                                        ttCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACAt                                                                                                 >  3:840138/1‑114 (MQ=255)

                                                                        ttCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACAt                                                                                                 <  4:840138/114‑1 (MQ=255)

                                                                           aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTa                                                                                                                         >  4:621869/1‑87 (MQ=255)

                                                                           aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGa                                                           >  1:1206373/1‑149 (MQ=255)

                                                                                aGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTcc                                                      >  2:678971/1‑149 (MQ=255)

                                                                                 ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggat                                                                                      <  3:153662/116‑1 (MQ=255)

                                                                                 ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCg                                                     >  1:265437/1‑149 (MQ=255)

                                                                                  gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataata                                                                      >  4:1587424/1‑131 (MQ=255)

                                                                                  gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataata                                                                      <  3:1587424/131‑1 (MQ=255)

                                                                                    cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTcc                                                      >  4:1665469/1‑145 (MQ=255)

                                                                                     tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    <  1:1065829/98‑1 (MQ=255)

                                                                                     tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    >  2:1065829/1‑98 (MQ=255)

                                                                                     tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    >  2:1766042/1‑98 (MQ=255)

                                                                                     tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    <  1:1766042/98‑1 (MQ=255)

                                                                                      gATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc                                                <  3:435096/149‑1 (MQ=255)

                                                                                      gATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc                                                >  2:514334/1‑149 (MQ=255)

                                                                                        tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc                                                >  3:1220836/1‑147 (MQ=255)

                                                                                        tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc                                                <  4:1220836/147‑1 (MQ=255)

                                                                                         aaGCGCAGCGCATCAGGCATTGTCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    <  4:1747145/94‑1 (MQ=255)

                                                                                         aaGCGCAGCGCATCAGGCATTGTCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                                                                    >  3:1747145/1‑94 (MQ=255)

                                                                                         aaGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGa                                             <  3:344789/149‑1 (MQ=255)

                                                                                            cgcagcgcaTCAGGTATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcgc                                          >  2:267754/1‑149 (MQ=255)

                                                                                                 cgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                                                           >  1:716075/1‑111 (MQ=255)

                                                                                                 cgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                                                           <  2:716075/111‑1 (MQ=255)

                                                                                                    aTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGtt                                  >  3:696010/1‑149 (MQ=255)

                                                                                                     tCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTg                                 >  2:45810/1‑149 (MQ=255)

                                                                                                      cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcgc                                          >  4:36053/1‑139 (MQ=255)

                                                                                                      cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcgc                                          <  3:36053/139‑1 (MQ=255)

                                                                                                        ggCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                                                                                          >  4:1751257/1‑57 (MQ=255)

                                                                                                        ggCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCgg                                                    >  3:1451864/1‑127 (MQ=255)

                                                                                                         gCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCa                                                                              <  1:495979/100‑1 (MQ=255)

                                                                                                          cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTa                                       <  2:956810/138‑1 (MQ=255)

                                                                                                             ggccggataaggcgcttgtgccgccatccggcCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCgg                                                    <  4:1418591‑M2/90‑1 (MQ=255)

                                                                                                             ggccggataaggcgcttgtgccgccatccggcCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCgg                                                    >  3:1418591‑M2/33‑122 (MQ=255)

                                                                                                                cggataaggcgcttgtgccgccatccggcCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcgc                                          >  1:979679‑M2/30‑129 (MQ=255)

                                                                                                                   ATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGt                                                   <  3:518207‑M1/117‑1 (MQ=255)

                                                                                                                   ATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGt                                                   >  4:518207‑M1/1‑117 (MQ=255)

                                                                                                                       cggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTcc               <  4:696010/149‑1 (MQ=255)

                                                                                                                       cggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTcc               <  4:1516189/149‑1 (MQ=255)

                                                                                                                        ggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcgc                                          >  3:656068/1‑121 (MQ=255)

                                                                                                                         gcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTg             >  2:460678/1‑149 (MQ=255)

                                                                                                                         gcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTg             >  1:112346/1‑149 (MQ=255)

                                                                                                                           acaAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                                                                    >  2:1773006/1‑76 (MQ=255)

                                                                                                                           acaAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                                                                    <  1:1773006/76‑1 (MQ=255)

                                                                                                                               gcgcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTg       <  2:265437/149‑1 (MQ=255)

                                                                                                                                cgcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGc      <  2:677031/149‑1 (MQ=255)

                                                                                                                                  ccTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGtt                                  >  4:131556/1‑119 (MQ=255)

                                                                                                                                  ccTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCaataat                     <  3:1342169/132‑1 (MQ=255)

                                                                                                                                  ccTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCaataat                     >  4:1342169/1‑132 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCTGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAt   >  2:1137678/1‑149 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGa                                <  1:183588/120‑1 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGa                                >  2:183588/1‑120 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAt   >  3:520710/1‑149 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAt   <  1:319317/149‑1 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAt   <  2:1437383/149‑1 (MQ=255)

                                                                                                                                   cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAt   >  3:1656623/1‑149 (MQ=255)

                                                                                                                                    ttATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTTGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCaataa                      >  3:393380/1‑129 (MQ=255)

                                                                                                                                    ttATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCaataa                      <  4:393380/129‑1 (MQ=255)

                                                                                                                                    ttATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCAtt  <  1:514334/149‑1 (MQ=255)

                                                                                                                                    ttATCCGGCCTACAAAACCACAAAACGTCATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGcc                                                             <  4:1803723/90‑1 (MQ=255)

                                                                                                                                         cggcCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGa                                >  4:1798382‑M2/5‑114 (MQ=255)

                                                                                                                                         cggcCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGa                                <  3:1798382‑M2/110‑1 (MQ=255)

                                                                                                                                             cTACAAAACCACAAAACGTTATTCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGAc                               >  1:887440/1‑111 (MQ=255)

                                                                                                                                             cTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataata                                                                      >  3:1673730/1‑72 (MQ=255)

                                                                                                                                             cTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGAc                               <  2:887440/111‑1 (MQ=255)

                                                                                                                                             cTACAAAACCACAAAACGTTATGCCGCAGCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataata                                                                      <  4:1673730/72‑1 (MQ=255)

TGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACGCGTAGCGTTGACCTGCAATAATATCTCCTGCCCGTGCCATT  >  NC_000913/277597‑277877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.