New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1697230 =145 (0.780)7 (0.040) 6/214 NT 5.9% intergenic (‑178/+43) uidR/hdhA transcriptional repressor/7‑alpha‑hydroxysteroid dehydrogenase, NAD‑dependent
?NC_000913 1697261 = 93 (0.550)intergenic (‑209/+12) uidR/hdhA transcriptional repressor/7‑alpha‑hydroxysteroid dehydrogenase, NAD‑dependent

Only 100 of 125 total aligned reads displayed.

TTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGT  >  NC_000913/1697113‑1697404
                                                                                                                                                    |                                                                                                                                               
    tGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGt                                                                                                                                             >  2:785646/1‑149 (MQ=255)
      ttGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTa                                                                                                                                           >  1:738442/1‑149 (MQ=255)
      ttGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTa                                                                                                                                           <  4:1492624/149‑1 (MQ=255)
         aaTAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtg                                                                                                                                        <  3:577313/149‑1 (MQ=255)
            aGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAt                                                                                                                                     <  3:1539480/149‑1 (MQ=255)
             gTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGCTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGt                                                                                                                                             <  4:1096602/140‑1 (MQ=255)
             gTGCGAAGGCAAACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGt                                                                                                                                             >  3:1096602/1‑140 (MQ=255)
                cGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAt                                                                                                                                 <  1:1776922/149‑1 (MQ=255)
                 gAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAtt                                                                                                                                <  1:549945/149‑1 (MQ=255)
                   aGGCACACTCTATTCGTATACTTTTCACTCTGACATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGa                                                                                                                              <  4:1659588/149‑1 (MQ=255)
                     gCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGc                                                                                                                            >  4:1329958/1‑149 (MQ=255)
                                  gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccac                                                                                                               >  3:1133697/1‑149 (MQ=255)
                                  gTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccac                                                                                                               >  4:1337688/1‑149 (MQ=255)
                                   tataCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGa                                                                                                                              >  1:1172167/1‑133 (MQ=255)
                                   tataCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGa                                                                                                                              <  2:1172167/133‑1 (MQ=255)
                                   tataCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                              >  2:1350245/1‑149 (MQ=255)
                                   tataCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                              >  2:1351613/1‑149 (MQ=255)
                                   tataCTTTTCACCCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacc                                                                                                              >  2:1525879/1‑149 (MQ=255)
                                     taCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgt                                                                                                                                         <  2:661344/120‑1 (MQ=255)
                                     taCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgt                                                                                                                                         >  1:661344/1‑120 (MQ=255)
                                      aCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAt                                                                                                                                     <  4:1812210/123‑1 (MQ=255)
                                      aCTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAt                                                                                                                                     >  3:1812210/1‑123 (MQ=255)
                                      aCTTTTCACCCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCaccacc                                                                                                           <  1:1525879/149‑1 (MQ=255)
                                        ttttCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAt                                                                                                                                 >  1:1721476/1‑125 (MQ=255)
                                        ttttCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAt                                                                                                                                 <  2:1721476/125‑1 (MQ=255)
                                        ttttCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCgg                                                                                                         >  2:762256/1‑149 (MQ=255)
                                         tttCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtgt                                                                                                                                       >  1:659909/1‑118 (MQ=255)
                                         tttCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAgtgt                                                                                                                                       <  2:659909/118‑1 (MQ=255)
                                              ctctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGgaga                                                                                                      >  1:820909/1‑146 (MQ=255)
                                              ctctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGgaga                                                                                                      <  2:820909/146‑1 (MQ=255)
                                               tctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGt                                                                                                  <  1:1503741/149‑1 (MQ=255)
                                                ctGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCATAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTg                                                                                                 >  2:397492/1‑149 (MQ=255)
                                                   aaaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTgaga                                                                                              >  2:438446/1‑149 (MQ=255)
                                                    aaTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGaa                                                                                             >  3:520823/1‑149 (MQ=255)
                                                     aTTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAt                                                                                            <  4:520823/149‑1 (MQ=255)
                                                      ttGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAtt                                                                                           <  3:1337688/149‑1 (MQ=255)
                                                      ttGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAtt                                                                                           <  4:1133697/149‑1 (MQ=255)
                                                        ggTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTAccc                                                                                                                  >  2:1660395/1‑124 (MQ=255)
                                                        ggTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTAccc                                                                                                                  <  1:1660395/124‑1 (MQ=255)
                                                         gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAg                                                                                                                             <  4:660081/112‑1 (MQ=255)
                                                         gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAttt                                                                                          >  2:1651622/1‑147 (MQ=255)
                                                         gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAttt                                                                                          <  1:1651622/147‑1 (MQ=255)
                                                         gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGt                                                                                        >  4:1572445/1‑149 (MQ=255)
                                                          ttAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAt                                                                                            >  2:984930/1‑144 (MQ=255)
                                                          ttAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTc                                                                                       >  3:53288/1‑149 (MQ=255)
                                                          ttAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTc                                                                                       <  1:397492/149‑1 (MQ=255)
                                                           tAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTcc                                                                                      <  3:1572445/149‑1 (MQ=255)
                                                               cAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAt                                                                                                                                     <  4:911108/98‑1 (MQ=255)
                                                               cAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTAt                                                                                                                                     >  3:911108/1‑98 (MQ=255)
                                                                aaTAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTcc                                                                                                                         <  1:1855587/109‑1 (MQ=255)
                                                                aaTAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTcc                                                                                                                         >  2:1855587/1‑109 (MQ=255)
                                                                      cGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacca                                                                                                             >  4:751142/1‑115 (MQ=255)
                                                                      cGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCccacca                                                                                                             <  3:751142/115‑1 (MQ=255)
                                                                           tttGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCgca                                                                      <  4:1718903/149‑1 (MQ=255)
                                                                                cTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAgg                                                                 <  3:1329958/149‑1 (MQ=255)
                                                                                 tGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAg                                                                                                                             <  2:553518/88‑1 (MQ=255)
                                                                                 tGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAg                                                                                                                             >  1:553518/1‑88 (MQ=255)
                                                                                   ccAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGa                                                              <  4:53288/149‑1 (MQ=255)
                                                                                    cAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGCCGAg                                                             <  1:1671545/149‑1 (MQ=255)
                                                                                        tATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCaaa                                                         <  2:620695/149‑1 (MQ=255)
                                                                                          tttAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAtt                                                                                                                                >  1:1351253/1‑76 (MQ=255)
                                                                                          tttAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAAtt                                                                                                                                <  2:1351253/76‑1 (MQ=255)
                                                                                           ttAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGa                                                      <  1:785646/149‑1 (MQ=255)
                                                                                                    aCGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCaaa                                                         <  4:1554654/137‑1 (MQ=255)
                                                                                                    aCGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCaaa                                                         >  3:1554654/1‑137 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTAcc                                                                               <  3:937641/113‑1 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTAcc                                                                               >  4:937641/1‑113 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCa                                                                             <  3:642212/115‑1 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCa                                                                             >  4:642212/1‑115 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCg                                           <  1:1350245/149‑1 (MQ=255)
                                                                                                      gTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGGGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCg                                           <  1:1351613/149‑1 (MQ=255)
                                                                                                       ttGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGgaga                                                                                                      <  2:1667737/89‑1 (MQ=255)
                                                                                                         gatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGaa                                                     <  1:1741594/136‑1 (MQ=255)
                                                                                                         gatgaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGaa                                                     >  2:1741594/1‑136 (MQ=255)
                                                                                                            gaGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAg                                                                            <  1:277519/110‑1 (MQ=255)
                                                                                                                   tCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCgca                                                                      <  3:264360/109‑1 (MQ=255)
                                                                                                                   tCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCgca                                                                      >  1:1681352/1‑109 (MQ=255)
                                                                                                                   tCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCgca                                                                      >  4:264360/1‑109 (MQ=255)
                                                                                                                    cccGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTg                             <  4:924323/149‑1 (MQ=255)
                                                                                                                       GGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTg                             >  3:282628‑M1/1‑146 (MQ=255)
                                                                                                                       GGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTg                             >  3:972082‑M1/1‑146 (MQ=255)
                                                                                                                        gtaaacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAata                                  >  1:838108‑M2/29‑140 (MQ=255)
                                                                                                                        gtaaacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGt                         >  3:681300‑M2/29‑149 (MQ=255)
                                                                                                                         taaacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCaccacc                                                                                                           <  4:1595429‑M2/39‑1 (MQ=255)
                                                                                                                         taaacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCaccacc                                                                                                           >  3:1595429‑M2/28‑66 (MQ=255)
                                                                                                                          AAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGga                                                                                                        <  4:1040540‑M1/68‑1 (MQ=255)
                                                                                                                          AAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGga                                                                                                        <  1:927387‑M1/68‑1 (MQ=255)
                                                                                                                          AAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGga                                                                                                        >  2:927387‑M1/1‑68 (MQ=255)
                                                                                                                          AAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGga                                                                                                        >  3:1040540‑M1/1‑68 (MQ=255)
                                                                                                                           aacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGa                                                                                                                              >  2:451073‑M2/26‑45 (MQ=255)
                                                                                                                           aacaaccgtgcgtgttgtttaccggTCCGTTAGTGTATTAATTGa                                                                                                                              <  1:451073‑M2/20‑1 (MQ=255)
                                                                                                                              AACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGccc                   <  1:748588‑M1/149‑1 (MQ=255)
                                                                                                                                     acgGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTc            <  2:748588/149‑1 (MQ=255)
                                                                                                                                         ttgtttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCACAGCAGGCGAGCAAAGGAACAGCGCTGCGTTa                                        >  2:1768822‑M2/12‑117 (MQ=255)
                                                                                                                                            tttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCgg     >  3:334101‑M2/9‑149 (MQ=255)
                                                                                                                                             ttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTg                       <  4:113847‑M2/123‑1 (MQ=255)
                                                                                                                                             ttaccggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTg                       >  3:113847‑M2/8‑130 (MQ=255)
                                                                                                                                               accggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAttt                                                                                          >  1:546261‑M2/6‑61 (MQ=255)
                                                                                                                                               accggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAAttt                                                                                          <  2:546261‑M2/56‑1 (MQ=255)
                                                                                                                                                 cggTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCgt  >  3:665684‑M2/4‑147 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
TTGCTGTTGAATAGTGCGAAGGCACACTCTATTCGTATACTTTTCACTCTGAAATTGGTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGT  >  NC_000913/1697113‑1697404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.