BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2822046 =	145 (0.780)	7 (0.040)	5/226	NT	5.0%	intergenic (‑35/+93)	alaS/recX	alanyl‑tRNA synthetase/regulatory protein for RecA
*	?	NC_000913	2822080 =	126 (0.710)	7 (0.040)	5/226	NT	5.0%	intergenic (‑69/+59)	alaS/recX	alanyl‑tRNA synthetase/regulatory protein for RecA

Only 100 of 158 total aligned reads displayed.

TGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTC  >  NC_000913/2821933‑2822225

tgctgGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                  <  2:602031/149‑1 (MQ=255)

tgctgGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                  <  1:300578/149‑1 (MQ=255)

 gctgGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAc                                                                                                                                                 <  3:1010059/149‑1 (MQ=255)

    ggCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGa                                                                                                                                              <  2:1180634/149‑1 (MQ=255)

       aaCTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGaaaa                                                                                                                                           <  3:97588/149‑1 (MQ=255)

       aaCTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGaaaa                                                                                                                                           >  1:636853/1‑149 (MQ=255)

         cTACCTGATGTCCGTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGt                                                                                                                                         <  1:1114193/149‑1 (MQ=255)

         cTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGt                                                                                                                                         >  2:68345/1‑149 (MQ=255)

                 tGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataa                                                                                                                                 <  4:772047/149‑1 (MQ=255)

                    cccTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagat                                                                                                                              >  3:456659/1‑149 (MQ=255)

                     ccTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagata                                                                                                                             >  3:846905/1‑149 (MQ=255)

                      cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTa                                                                                                                                                   >  1:1630418/1‑126 (MQ=255)

                      cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTa                                                                                                                                                   <  2:1630418/126‑1 (MQ=255)

                      cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                            <  4:1369619/149‑1 (MQ=255)

                           tATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGaa                                                                                                                                    >  3:995636/1‑136 (MQ=255)

                           tATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagat                                                                                                                              <  1:1542646/142‑1 (MQ=255)

                           tATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagat                                                                                                                              >  2:1542646/1‑142 (MQ=255)

                            aTGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      <  3:1092813/149‑1 (MQ=255)

                              ggAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCtt                                                                                                                    <  2:509877/149‑1 (MQ=255)

                               gAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                            <  3:1459157/140‑1 (MQ=255)

                                aaaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCGGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAGGTg                                                                                                                                        <  2:1679019/127‑1 (MQ=255)

                                aaaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                            <  2:315385/139‑1 (MQ=255)

                                aaaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGa                                                                                                                  >  2:1152080/1‑149 (MQ=255)

                                 aaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTg                                                                                                                                        >  1:389361/1‑126 (MQ=255)

                                 aaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTg                                                                                                                                        <  2:389361/126‑1 (MQ=255)

                                   taGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      <  2:1878363/141‑1 (MQ=255)

                                   taGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      >  1:1878363/2‑142 (MQ=255)

                                     gTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataaga                                                                                                                               <  4:239658/131‑1 (MQ=255)

                                          gaAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      <  3:1883372/135‑1 (MQ=255)

                                           aaaCGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTggg                                                                                                             <  3:924004/143‑1 (MQ=255)

                                                 cTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTggg                                                                                                                                      >  4:599879/1‑112 (MQ=255)

                                                    aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTa                                                                                              >  2:688620/1‑149 (MQ=255)

                                                    aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTa                                                                                              >  4:1264980/1‑149 (MQ=255)

                                                         tctcAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataag                                                                                                                                <  3:988036/110‑1 (MQ=255)

                                                          atacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                  <  2:1156128‑M1/36‑1 (MQ=255)

                                                          atacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                  >  1:1156128‑M1/56‑91 (MQ=255)

                                                             aGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAg                                                                                     >  3:674945/1‑149 (MQ=255)

                                                               cGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTATCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTc                                                                                   <  2:571771/149‑1 (MQ=255)

                                                                  tGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGc                                                                                >  3:822127/1‑149 (MQ=255)

                                                                     tctTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                            <  3:45261/102‑1 (MQ=255)

                                                                     tctTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                            >  4:45261/1‑102 (MQ=255)

                                                                      ctTCCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAGGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCaaaa                                                                            >  1:127806/1‑149 (MQ=255)

                                                                         gCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAAttt                                                                         >  3:480684/1‑149 (MQ=255)

                                                                           tCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATAc                                                                                                  <  3:1408448/122‑1 (MQ=255)

                                                                           tCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATAc                                                                                                  >  4:1408448/1‑122 (MQ=255)

                                                                                    tCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtctc                                                              <  3:1264980/149‑1 (MQ=255)

                                                                                      cTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt                                                            >  1:1698610/1‑149 (MQ=255)

                                                                                       tGAAATAAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg                                                           >  2:1335267/1‑149 (MQ=255)

                                                                                          aaTCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACTGCCGGGCTGGTAACTGAAAAGTgg                                                                                                                                       >  4:673472/1‑70 (MQ=255)

                                                                                          aaTCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTgg                                                                                                                                       <  3:673472/70‑1 (MQ=255)

                                                                                               aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCtt                                                                                                                    <  4:826607/84‑1 (MQ=255)

                                                                                               aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        >  4:498518/1‑128 (MQ=255)

                                                                                               aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        >  2:1829909/1‑128 (MQ=255)

                                                                                               aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        <  1:1829909/128‑1 (MQ=255)

                                                                                               aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        <  3:498518/128‑1 (MQ=255)

                                                                                                gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                                                  <  4:93243/149‑1 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      >  4:1793845/1‑79 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                                                      <  3:1793845/79‑1 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                                             >  1:279310/1‑136 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                                             <  2:279310/136‑1 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa                                                <  2:1268443/149‑1 (MQ=255)

                                                                                                  tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa                                                >  4:875760/1‑149 (MQ=255)

                                                                                                   aaCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCAt                                               >  3:1281369/1‑149 (MQ=255)

                                                                                                     cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa                                             <  2:1698610/149‑1 (MQ=255)

                                                                                                      gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGttt                                                                                                                        <  4:855673/73‑1 (MQ=255)

                                                                                                      gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGttt                                                                                                                        >  3:855673/1‑73 (MQ=255)

                                                                                                          tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg                                        <  1:688620/149‑1 (MQ=255)

                                                                                                            tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa                                             >  2:1836753/1‑142 (MQ=255)

                                                                                                            tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa                                             <  1:1836753/142‑1 (MQ=255)

                                                                                                               ttaccagcccggcggttaagacacgctggagctggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTAt                                                                                             >  1:1156128‑M2/37‑91 (MQ=255)

                                                                                                               ttaccagcccggcggttaagacacgctggagctggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg                                   >  2:712013‑M2/37‑149 (MQ=255)

                                                                                                               ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                                             <  4:436475/123‑1 (MQ=255)

                                                                                                                  CCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATc                                                     >  2:1295595‑M1/1‑128 (MQ=255)

                                                                                                                  CCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATc                                                     <  1:1295595‑M1/128‑1 (MQ=255)

                                                                                                                   cagcccggcggttaagacacgctggagctggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt                                                            <  4:496106‑M2/88‑1 (MQ=255)

                                                                                                                   cagcccggcggttaagacacgctggagctggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATag                               >  1:453227‑M2/33‑149 (MQ=255)

                                                                                                                    AGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATaga                              >  4:1281369‑M1/1‑149 (MQ=255)

                                                                                                                       tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        >  1:236574/1‑104 (MQ=255)

                                                                                                                       tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                        <  2:236574/104‑1 (MQ=255)

                                                                                                                         cAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa                         >  3:522296/1‑149 (MQ=255)

                                                                                                                           gCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg                                                           >  4:1521275/1‑113 (MQ=255)

                                                                                                                               gtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGCTAGAGCAGAAAACGc                   <  1:155366/149‑1 (MQ=255)

                                                                                                                               gtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc                   <  3:34488/149‑1 (MQ=255)

                                                                                                                                 cTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTg                 <  1:567610/149‑1 (MQ=255)

                                                                                                                                  ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg                                                           <  4:780094/106‑1 (MQ=255)

                                                                                                                                  ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa                                  <  4:992209/131‑1 (MQ=255)

                                                                                                                                  ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTgg                >  4:246273/1‑149 (MQ=255)

                                                                                                                                   tAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGa               <  3:246273/149‑1 (MQ=255)

                                                                                                                                    aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAt              >  1:1717374/1‑149 (MQ=255)

                                                                                                                                    aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAt              >  4:479156/1‑149 (MQ=255)

                                                                                                                                     acgctggagctggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATc             <  1:712013‑M2/135‑1 (MQ=255)

                                                                                                                                         ccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGcc                                                                     <  2:1018468/89‑1 (MQ=255)

                                                                                                                                         ccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGcc                                                                     >  1:1018468/1‑89 (MQ=255)

                                                                                                                                               tggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACttttt   <  1:1335267‑M2/145‑1 (MQ=255)

                                                                                                                                                ggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTc                                                                                       >  1:1670534‑M2/4‑64 (MQ=255)

                                                                                                                                                ggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa                           >  3:928965‑M2/4‑124 (MQ=255)

                                                                                                                                                ggtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa                           <  4:928965‑M2/121‑1 (MQ=255)

                                                                                                                                                 gtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTGCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCt                  <  3:1528000‑M2/130‑1 (MQ=255)

                                                                                                                                                 gtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa                                >  2:156752‑M2/3‑118 (MQ=255)

                                                                                                                                                 gtAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCt                  >  4:1528000‑M2/3‑132 (MQ=255)

TGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTC  >  NC_000913/2821933‑2822225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.