BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3717215 =	381 (2.040)	18 (0.110)	11/214	NT	5.5%	intergenic (+9/‑95)	yiaD/ghrB	multicopy suppressor of bamB; outer membrane lipoprotein/glyoxylate/hydroxypyruvate reductase B
*	?	NC_000913	3717245 =	276 (1.650)	18 (0.110)	11/214	NT	5.5%	intergenic (+39/‑65)	yiaD/ghrB	multicopy suppressor of bamB; outer membrane lipoprotein/glyoxylate/hydroxypyruvate reductase B

Only 100 of 419 total aligned reads displayed.

CGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCATTTCACCGTTCACCAGGTG  >  NC_000913/3717099‑3717393

cGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCAttct                                                                                                                                                    >  3:858711/1‑149 (MQ=255)

      cGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGtt                                                                                                                                              >  1:982381/1‑149 (MQ=255)

        tACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGACGGGTAGAAATTACATTACGCCCGCTGTAATCCCTTTCATGCCAGGAGATGCAGAAATAACCTGGAATTCTTCAGtttt                                                                                                                                            >  4:908580/1‑149 (MQ=255)

                gCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTtca                                                                                                                                      >  2:207271/1‑147 (MQ=255)

                gCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTtca                                                                                                                                      <  1:207271/147‑1 (MQ=255)

                        ccGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCGTTCTTCAGTTTTCCTTCATCatat                                                                                                                                <  3:1356575/145‑1 (MQ=255)

                              aaCCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTaa                                                                                                                      <  3:1272800/149‑1 (MQ=255)

                                 ccAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCatat                                                                                                                                <  2:1582921/136‑1 (MQ=255)

                                 ccAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCa                                                                                                                            <  3:1780845/140‑1 (MQ=255)

                                 ccAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCa                                                                                                                            >  4:1780845/1‑140 (MQ=255)

                                 ccAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGt                                                                                                                   >  4:1074320/1‑149 (MQ=255)

                                  cAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTg                                                                                                                  >  2:284697/1‑149 (MQ=255)

                                   aaTCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAg                                                                                                                     >  2:1512992/1‑145 (MQ=255)

                                   aaTCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGa                                                                                                                 >  4:1857767/1‑149 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAgg                                                                                                                          <  4:703335/138‑1 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAgg                                                                                                                          >  3:703335/1‑138 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATc                                                                                                               >  2:600459/1‑149 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATc                                                                                                               <  3:144170/149‑1 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATc                                                                                                               <  1:686121/149‑1 (MQ=255)

                                     tCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATc                                                                                                               >  3:946100/1‑149 (MQ=255)

                                         cAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCt                                                                                                           <  3:1857767/149‑1 (MQ=255)

                                          aGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCtt                                                                                                          >  1:250120/1‑149 (MQ=255)

                                              aCAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTGTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCa                                                                                                      <  1:1545600/149‑1 (MQ=255)

                                                aGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGt                                                                                                    <  3:106710/149‑1 (MQ=255)

                                                aGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGt                                                                                                    >  1:314440/1‑149 (MQ=255)

                                                   aCCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTAt                                                                                                        <  3:803429/142‑1 (MQ=255)

                                                    ccGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGttt                                                                                                                                             >  2:1252918/1‑104 (MQ=255)

                                                    ccGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGttt                                                                                                                                             <  1:1252918/104‑1 (MQ=255)

                                                     cGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATg                                                                                               <  1:1806439/149‑1 (MQ=255)

                                                      gCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATgg                                                                                              >  4:1054322/1‑149 (MQ=255)

                                                       cAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGga                                                                                             <  2:250120/149‑1 (MQ=255)

                                                        aGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGgag                                                                                            <  3:48879/149‑1 (MQ=255)

                                                            ggTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGaa                                                                                        <  1:600459/149‑1 (MQ=255)

                                                                aGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGt                                                                                                                   >  1:1596554/1‑118 (MQ=255)

                                                                   cgcAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGaa                                                                                 <  1:284697/149‑1 (MQ=255)

                                                                   cgcAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGaa                                                                                 <  3:1107777/149‑1 (MQ=255)

                                                                    gcAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGa                                                                                                                 <  4:1195053/116‑1 (MQ=255)

                                                                    gcAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGa                                                                                                                 >  3:1195053/1‑116 (MQ=255)

                                                                        aaCCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGccgt                                                                            >  4:3243/1‑149 (MQ=255)

                                                                             ccgTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATc                                                                                                               <  3:44904/109‑1 (MQ=255)

                                                                                tgtAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATc                                                                    <  2:1159575/149‑1 (MQ=255)

                                                                                  tAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCa                                                                                                                            >  4:453579/1‑91 (MQ=255)

                                                                                     aaaTTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGcc                                                                              >  2:645376/1‑134 (MQ=255)

                                                                                       aTTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTtcat                                                                                                                                     >  3:432212/1‑77 (MQ=255)

                                                                                         tACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTg                                                                                                   >  1:1361057/1‑109 (MQ=255)

                                                                                            cTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGAt                                                                                                                <  4:245206/93‑1 (MQ=255)

                                                                                            cTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGAt                                                                                                                >  3:245206/1‑93 (MQ=255)

                                                                                            cTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATc                                                                    <  4:434315/137‑1 (MQ=255)

                                                                                             ttAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTa                                                               <  2:1339216/141‑1 (MQ=255)

                                                                                                    cGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCtga                                                >  3:1019696/1‑149 (MQ=255)

                                                                                                         tAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGAtt                                           >  3:304877/1‑149 (MQ=255)

                                                                                                           aTCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTtc                                                                                                                                       <  4:1280651/55‑1 (MQ=255)

                                                                                                            tCCCTTTCATGCCAGGTGATGCAGAAATCAGCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTaa                                                                                                                      <  1:548872/71‑1 (MQ=255)

                                                                                                            tCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTaa                                                                                                                      >  2:548872/1‑71 (MQ=255)

                                                                                                            tCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCctct                                                                <  1:1779816/125‑1 (MQ=255)

                                                                                                            tCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGc                                                         <  4:211565/132‑1 (MQ=255)

                                                                                                            tCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGc                                                         >  3:211565/1‑132 (MQ=255)

                                                                                                             cccTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACt                                       >  2:446519/1‑149 (MQ=255)

                                                                                                              tgaagaATGCCAGGTGATTTCTGCATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCt                                                                                                           >  2:383210‑M1/7‑80 (MQ=255)

                                                                                                              ccTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAAt                                                                                                <  1:357902/91‑1 (MQ=255)

                                                                                                              ccTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTAc                                                    <  3:1460018/135‑1 (MQ=255)

                                                                                                              ccTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTAc                                                    >  4:1460018/1‑135 (MQ=255)

                                                                                                              ccTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTAc                                                    <  2:1816384/135‑1 (MQ=255)

                                                                                                                tttCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGAtt                                           >  2:1390425/1‑142 (MQ=255)

                                                                                                                  tCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGAtt                                           >  4:83762/1‑140 (MQ=255)

                                                                                                                    ATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGaa                                                                                 <  4:565052‑M1/100‑1 (MQ=255)

                                                                                                                    ATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGc                                >  3:1694163‑M1/1‑149 (MQ=255)

                                                                                                                      GCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGgagaga                                                                                         <  2:1484343‑M1/90‑1 (MQ=255)

                                                                                                                      GCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATc                                                                    <  2:34315‑M1/111‑1 (MQ=255)

                                                                                                                        caggtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAgg                                                                                                                    <  4:1720302‑M2/35‑1 (MQ=255)

                                                                                                                        caggtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAgg                                                                                                                    >  3:1720302‑M2/27‑61 (MQ=255)

                                                                                                                        caggtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATg                                                                                               <  4:1676899‑M2/56‑1 (MQ=255)

                                                                                                                        caggtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACt                                       <  3:891880‑M2/112‑1 (MQ=255)

                                                                                                                        caggtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGc                            >  3:1572281‑M2/27‑149 (MQ=255)

                                                                                                                         AGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTa                                         >  1:64184‑M1/1‑135 (MQ=255)

                                                                                                                         AGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTAc                                        >  4:512969‑M1/1‑136 (MQ=255)

                                                                                                                          GGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAAt                                                                                                <  3:1322796‑M1/79‑1 (MQ=255)

                                                                                                                          GGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCtt                                                      <  1:1195547‑M1/121‑1 (MQ=255)

                                                                                                                          GGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCt                              <  3:538913‑M1/145‑1 (MQ=255)

                                                                                                                          GGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCaa                          >  4:1349048‑M1/1‑149 (MQ=255)

                                                                                                                           gtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCctct                                                                <  3:153575‑M2/87‑1 (MQ=255)

                                                                                                                           gtgatttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCctct                                                                >  4:153575‑M2/24‑110 (MQ=255)

                                                                                                                            TGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAaga                        >  1:785653‑M1/1‑149 (MQ=255)

                                                                                                                              ATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGcc                                                                              >  4:888955‑M1/1‑93 (MQ=255)

                                                                                                                                ttctgcatcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCAt                    <  4:1572281‑M2/131‑1 (MQ=255)

                                                                                                                                gcaaaaaTCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAaga                        <  1:506611/141‑1 (MQ=255)

                                                                                                                                gCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTAt                                                                                                        <  1:1485127/65‑1 (MQ=255)

                                                                                                                                gCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCAt                    <  1:446519/149‑1 (MQ=255)

                                                                                                                                gCAAAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAaga                        >  2:506611/1‑145 (MQ=255)

                                                                                                                                 cAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCAtt                   >  2:943603/1‑149 (MQ=255)

                                                                                                                                  aGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGc                                                                                      >  2:852172/1‑81 (MQ=255)

                                                                                                                                   gAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGgag                                                                                            >  1:104118/1‑74 (MQ=255)

                                                                                                                                      atcacctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATg                                                                                               <  1:876769‑M2/56‑1 (MQ=255)

                                                                                                                                           ctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCATTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTAc                                                    <  2:177175‑M2/99‑1 (MQ=255)

                                                                                                                                           ctggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCAt                    <  2:715323‑M2/131‑1 (MQ=255)

                                                                                                                                            tggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCAt                                                                                    <  4:1387290‑M2/67‑1 (MQ=255)

                                                                                                                                            tggcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCtt                                                      <  4:1248551‑M2/97‑1 (MQ=255)

                                                                                                                                              gcatTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCtgatga                                             <  1:1283091‑M2/106‑1 (MQ=255)

                                                                                                                                               catTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAaga                        >  1:1404808‑M2/4‑130 (MQ=255)

                                                                                                                                                atTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTgatgat                                            <  4:770259‑M2/107‑1 (MQ=255)

CGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAATCCCTTTCATGCCAGGTGATGCAGAAATCACCTGGCATTCTTCAGTTTTCCTTCATCATATTTCAGGCTAAGGTGATCGCCTTATCAGTGAATGGAGAGAAGCATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCATTTCACCGTTCACCAGGTG  >  NC_000913/3717099‑3717393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.