| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4040481 | NA (NA) | 106 (0.600) | 19/226 | NT | 64.7% | intergenic (+58/‑36) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4040505 | 61 (0.330) | intergenic (+82/‑12) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon | |||||
Only 100 of 221 total aligned reads displayed.
GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG > NC_000913/4040357‑4040652 | gTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT < 2:348720‑M2/123‑1 (MQ=255) tAACTGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT > 1:480723‑M2/1‑116 (MQ=255) tCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCAt > 3:1016443/1‑149 (MQ=32) ccTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCga < 1:91990/149‑1 (MQ=32) tGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCgaga < 1:594554/149‑1 (MQ=32) aTACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGt > 4:484941/1‑149 (MQ=32) tACAGATTAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaa > 3:503842‑M2/1‑34 (MQ=255) aCAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAg < 4:873172/149‑1 (MQ=32) aCAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAg < 2:1058680/149‑1 (MQ=32) cAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAgg < 4:1016443/149‑1 (MQ=32) aGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAggg > 4:1314293/1‑149 (MQ=32) aGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAggg > 2:992948/1‑149 (MQ=32) aGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAggg < 2:1575256/149‑1 (MQ=32) aTTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGaa < 3:184123/149‑1 (MQ=32) ttAAATCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtac < 1:1192523‑M2/113‑86 (MQ=255) ttAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGTGAGTAGGGAAc > 1:874761/1‑149 (MQ=17) ttAAATCAGAACGCAGAAGCGGTCCGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAAc > 1:287023/1‑149 (MQ=17) aaTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcc < 4:496496‑M2/149‑125 (MQ=255) aaTCAGAACGCAGAAGCGGTCTGATttaaactgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggc < 3:1028417‑M2/149‑125 (MQ=255) aaTCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGc < 4:1409400/133‑1 (MQ=32) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 3:1434111‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacac < 3:1330128‑M2/142‑119 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggtt > 3:1125630‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 1:821696‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 2:805627‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 4:182254‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 2:1713048‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 4:228883‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcct < 4:722007‑M2/149‑126 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgctta > 1:1319242‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaag < 1:1528769‑M2/90‑67 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacgccttcggcgttgtaaggttaagcctcacggttcattagtaccggtt > 3:1322869‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaa > 1:674995‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgc < 4:1683294‑M2/135‑112 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgc < 1:808584‑M2/135‑112 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgc > 2:808584‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgc < 4:411964‑M2/133‑110 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgc > 3:411964‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatta > 2:891270‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatta < 1:891270‑M2/106‑83 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:63360‑M2/102‑79 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgc > 1:1106376‑M2/1‑24 (MQ=255) aTCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAggg > 3:97900/1‑142 (MQ=32) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggccta < 2:1185303‑M2/149‑127 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggccta < 4:1515114‑M2/149‑127 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggtta > 4:1057558‑M2/1‑23 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacatcttcggcgttgtaaggttaagcctcacggttcattagtaccggt < 2:450578‑M2/112‑90 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctgacggttcattagtaccggttagctcaacgcatcgctgcgc < 2:415199‑M2/133‑111 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggccta < 4:815870‑M2/149‑127 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggc < 3:849144‑M2/146‑124 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgc < 2:560821‑M2/133‑111 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggtta < 1:36526‑M2/114‑92 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggt < 3:158199‑M2/112‑90 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcatta > 3:283182‑M2/1‑23 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttc < 2:840198‑M2/101‑79 (MQ=255) tCAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca > 2:150748‑M2/1‑23 (MQ=255) tCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAgg > 3:160186/1‑140 (MQ=33) tCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAgg < 2:1824504/140‑1 (MQ=33) tCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAgg > 1:1824504/1‑140 (MQ=33) tCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAgg < 4:160186/140‑1 (MQ=33) cAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggccta > 3:1642549‑M2/1‑22 (MQ=255) cAGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggccta < 3:1750229‑M2/149‑128 (MQ=255) aGAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacaccc > 3:1368763‑M2/1‑21 (MQ=255) aGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAgg > 3:665173/1‑149 (MQ=32) gAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcatccgccaaaacagcttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatccctgcgcttacacacccggcctatca < 3:1238090‑M2/149‑130 (MQ=255) gAACGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatc < 2:1388562‑M2/149‑130 (MQ=255) gAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGc > 2:1214352/1‑149 (MQ=32) aaCGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAg > 2:71331/1‑135 (MQ=32) aaCGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCa > 4:383999/1‑149 (MQ=32) aaCGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCa < 1:674122/149‑1 (MQ=32) cGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaac > 4:1028417‑M2/1‑17 (MQ=255) cGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggc < 3:533766‑M2/141‑125 (MQ=255) cGCAGAAGCGGTCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggc > 4:533766‑M2/1‑17 (MQ=255) aGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCaaa < 4:305338/149‑1 (MQ=32) aGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCaaa < 4:1364372/149‑1 (MQ=32) aGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAAt < 3:118270/147‑1 (MQ=32) aGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAAt > 4:118270/1‑147 (MQ=32) cGGTCTGATAAAACAGAATTTGGCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTCGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATaaaa < 3:568661/149‑1 (MQ=12) tCTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtctt < 1:1488114‑M2/149‑144 (MQ=255) cTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttc > 4:1478310‑M2/1‑5 (MQ=255) cTGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgtt < 4:1326184‑M2/61‑57 (MQ=255) tGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagct < 4:595586‑M2/99‑96 (MQ=255) tGATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat < 4:1104606‑M2/84‑81 (MQ=255) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCg < 2:378852/113‑1 (MQ=33) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCg > 1:378852/1‑113 (MQ=33) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGaaa < 3:383999/149‑1 (MQ=32) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGaaa < 3:1236222/149‑1 (MQ=32) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGaaa < 4:665173/149‑1 (MQ=32) tGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGaaa < 1:448466/149‑1 (MQ=32) gATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttcaa < 3:1360858‑M2/149‑147 (MQ=255) gATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgctta > 3:1795067‑M2/1‑3 (MQ=255) gATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggt > 3:1051678‑M2/1‑3 (MQ=255) gATttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgcttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttcaa < 3:1284873‑M2/149‑147 (MQ=255) gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAg < 3:1261729/149‑1 (MQ=32) gATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAg > 4:260521/1‑149 (MQ=32) gATAAAACAGAATTTGCCTAGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCaaa > 3:1499734/1‑138 (MQ=18) aTttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttcaac > 4:510553‑M2/1‑2 (MQ=255) aTttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttcaac > 4:1630766‑M2/1‑2 (MQ=255) aTttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaacgcatcgctgcgcttacacacccggcctatcaacgtcgtcgtcttcaac < 1:1752202‑M2/149‑148 (MQ=255) aTttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcattagtaccggttagctcaac > 4:1793650‑M2/1‑2 (MQ=255) | GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG > NC_000913/4040357‑4040652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |