| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,071,615 | T→C | 5.7% | T48A (ACC→GCC) | yihS ← | sulphoquinovose isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,071,615 | 0 | T | C | 5.7% | 719.0 / 20.9 | 209 | T48A (ACC→GCC) | yihS | sulphoquinovose isomerase |
| Reads supporting (aligned to +/- strand): ref base T (91/106); new base C (5/7); total (96/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 210 total aligned reads displayed.
AGGCATACCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCATTTCATTCCTTTT > NC_000913/4071468‑4071763 | aGGCATACCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTg < 2:575030/149‑1 (MQ=255) ggCATACCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGc > 2:424800/1‑149 (MQ=255) gCATACCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGcc < 2:615246/149‑1 (MQ=255) aCCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTCATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCAtc < 1:322410/149‑1 (MQ=255) cAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCAtctc > 2:1523774/1‑149 (MQ=255) aGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATctct < 1:56715/149‑1 (MQ=255) gccgccATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGCACCCAtctgtg < 2:1578809/149‑4 (MQ=255) atatTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGa < 4:863439/149‑1 (MQ=255) tatTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGAt < 2:1289512/149‑1 (MQ=255) tatTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGAt > 3:957653/1‑149 (MQ=255) tatTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGAt < 1:454204/149‑1 (MQ=255) ttttATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCAtct < 1:969105/135‑1 (MQ=255) ttttATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGc < 3:1016319/149‑1 (MQ=255) ttttATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGc > 2:1749947/1‑149 (MQ=255) tCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCttt < 1:243820/149‑1 (MQ=255) tCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGCACCCAtctg < 2:81135/131‑2 (MQ=255) tCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGCACCCAtctg > 1:81135/1‑130 (MQ=255) aCGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCtcttct > 4:1425603/1‑133 (MQ=255) aCGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCtcttct < 3:1425603/133‑1 (MQ=255) aCGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTAt > 2:1710338/1‑149 (MQ=255) cGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTAtt < 4:163929/149‑1 (MQ=255) cGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTAtt < 4:1068963/149‑1 (MQ=255) cGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTAtt < 2:1081954/149‑1 (MQ=255) gCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCAtc < 4:1716590/125‑1 (MQ=255) gCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCAtc > 3:1716590/1‑125 (MQ=255) cAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGc > 3:56534/1‑149 (MQ=255) cAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGc < 3:1429305/149‑1 (MQ=255) cAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGc < 4:189026/149‑1 (MQ=255) gcCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAAcc > 4:787381/1‑149 (MQ=255) ccGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCa < 2:640955/149‑1 (MQ=255) ccGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCa > 2:378007/1‑149 (MQ=255) ccGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCa < 4:56534/149‑1 (MQ=255) ccGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGCACCCAtctgtg > 2:952169/1‑118 (MQ=255) cGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAg < 1:1710338/149‑1 (MQ=255) tGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCaaaa < 1:1519715/149‑1 (MQ=255) aTACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGa < 3:545086/112‑1 (MQ=255) aTACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGa > 4:545086/1‑112 (MQ=255) ccGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGccc < 1:1830346/96‑1 (MQ=255) ccGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGccc > 2:1830346/1‑96 (MQ=255) gATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGc > 1:390916/1‑143 (MQ=255) aTCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTc < 2:1085270/139‑1 (MQ=255) aTCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTc > 1:1085270/1‑139 (MQ=255) tCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGa < 1:1549904/149‑1 (MQ=255) aaccaacGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCt < 2:1040218/118‑1 (MQ=255) caacGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAAtttt > 1:726466/1‑149 (MQ=255) caacGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAAtttt > 3:68095/1‑149 (MQ=255) acGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTa < 1:1074374/149‑1 (MQ=255) acGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTa < 1:378007/149‑1 (MQ=255) cGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTAc < 4:957653/149‑1 (MQ=255) aGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTcttctt < 4:737547/90‑1 (MQ=255) aGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTcttctt > 3:1893427/1‑90 (MQ=255) aGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCa < 4:1209319/149‑1 (MQ=255) tAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCaaa > 1:923997/1‑149 (MQ=255) aGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACAAAAAt > 3:1814647/1‑149 (MQ=255) gcgcCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATc > 4:1029495/1‑149 (MQ=255) ccAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCaaa < 4:1110803/149‑1 (MQ=255) ggTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCaaaa < 1:119748/111‑1 (MQ=255) ggTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCaaaa > 2:119748/1‑111 (MQ=255) gTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCt > 2:1846338/1‑98 (MQ=255) gTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATg < 4:68095/149‑1 (MQ=255) aCCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGc > 3:761007/1‑101 (MQ=255) aCCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCaaa < 2:1515841/135‑1 (MQ=255) cccATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGcggtc < 2:1668429/149‑1 (MQ=255) cATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAAc > 4:412102/1‑104 (MQ=255) cATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAAc < 3:412102/104‑1 (MQ=255) aTCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGcggt > 4:105188/1‑145 (MQ=255) aTCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGcggt < 3:105188/145‑1 (MQ=255) cgccgcAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGttt < 3:999818/149‑1 (MQ=255) ccgcAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACAAAAATCAAAGATGCGGTCGGTTTcc < 4:1814647/149‑1 (MQ=255) cagcaACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTAtt > 3:848635/1‑79 (MQ=255) aaCGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCa > 2:854827/1‑149 (MQ=255) aCGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAg > 3:792734/1‑149 (MQ=255) ggAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGcc > 2:1455123/1‑149 (MQ=255) gAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAAttt > 1:1033823/1‑108 (MQ=255) aaTAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCgg < 2:303976/94‑1 (MQ=255) aaCGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTc > 3:1378924/1‑132 (MQ=255) aaCGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTc < 4:1378924/132‑1 (MQ=255) aaCATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGtt < 2:556515/123‑1 (MQ=255) aCATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCGGCCaaaa < 3:1070210/74‑1 (MQ=255) tACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAgg < 4:826954/149‑1 (MQ=255) aGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCa > 4:1686675/1‑70 (MQ=255) aGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCa < 3:1686675/70‑1 (MQ=255) gTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACg > 1:499159/1‑78 (MQ=255) gTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACg < 2:499159/78‑1 (MQ=255) tGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAAc > 3:812139/1‑149 (MQ=255) aTCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCa > 3:1622183/1‑149 (MQ=255) gaagaGATGGGCACCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGt > 3:1286264/5‑112 (MQ=255) ccACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCAtt > 1:59217/1‑149 (MQ=255) cacaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTaaa < 4:1477907/143‑1 (MQ=255) cacaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTaaa > 3:1477907/1‑143 (MQ=255) aagaGATGGGCACCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGaa < 3:714451/72‑1 (MQ=255) aagaGATGGGCACCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGaa > 4:714451/4‑75 (MQ=255) acaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGtt > 1:1637759/1‑111 (MQ=255) acaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTtgtg > 4:1785048/1‑127 (MQ=255) acaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTtgtg < 3:1785048/127‑1 (MQ=255) acaGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTtg > 1:1490098/1‑125 (MQ=255) gaGATGGGCACCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAAtttt < 1:126350/76‑1 (MQ=255) aGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCATTTCAt > 1:1765278/1‑149 (MQ=255) gATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCATTTCAtt < 3:1192815/149‑1 (MQ=255) gTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCATTTCATTCCttt < 2:726466/149‑1 (MQ=255) | AGGCATACCAGCCGCCATATTTTTTATCACGCAGTGCGCCGTTCATGGCTTTGATACCGTGATCAACCAACGAGTAAGCGCCAGGTCGACCCATCGCCGCAGCAACGGAATAAACGTGCAACATACGAGCGGTGATCCACAGATGGGTGCCCATCTCTTCTTTGATTTGCCCTTTATTGCCTAACCAGCCAAAACCAGTCGGCACTACGGAATTTTTACCAAAATCAAAGATGCGGTCGGTTTCCTGTTCCAGCCAACGGTTGTGGCTTAGGGTGTTAAACCATTTCATTCCTTTT > NC_000913/4071468‑4071763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |