| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,385,206 | T→A | 5.2% | P456P (CCT→CCA) | yjeM → | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,385,206 | 0 | T | A | 5.2% | 1192.2 / 34.2 | 324 | P456P (CCT→CCA) | yjeM | putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (154/153); new base A (7/10); total (161/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 348 total aligned reads displayed.
TCCTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTA > NC_000913/4385058‑4385353 | tCCTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTAGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCt < 3:513480/149‑1 (MQ=255) cTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTTGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgt > 4:179462/1‑149 (MQ=255) cTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgt < 1:119552/149‑1 (MQ=255) tCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAAtgtgtg < 2:1342356/149‑1 (MQ=255) tCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgtg > 1:1023763/1‑149 (MQ=255) tCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgtg < 1:703919/149‑1 (MQ=255) tCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtg < 3:943827/147‑1 (MQ=255) tCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtg > 4:943827/1‑147 (MQ=255) cgcgCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTgg < 2:1160341/149‑1 (MQ=255) gcTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTg > 2:3806/1‑149 (MQ=255) ggCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaat < 4:1532994/149‑2 (MQ=255) gCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGaa > 3:238199/1‑147 (MQ=255) tttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaatgat > 1:64962/1‑145 (MQ=255) tttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaatg < 2:855362/147‑3 (MQ=255) tttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaatg > 1:855362/1‑145 (MQ=255) ttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaatgatg < 2:64962/149‑6 (MQ=255) cGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTgg > 4:913488/1‑135 (MQ=255) gTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACt > 1:208271/1‑149 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCGTCATTCAACCtgtg < 3:139430/129‑1 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgt > 3:1775874/1‑128 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGaa > 1:1384259/1‑135 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTgg < 4:1487106/147‑1 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGa > 4:1327404/1‑149 (MQ=255) tttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaatga > 4:328186/1‑135 (MQ=255) aGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgt > 3:555527/1‑123 (MQ=255) aGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCtgt < 4:555527/123‑1 (MQ=255) tCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATtgt < 3:983118/149‑1 (MQ=255) ggATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTgg < 1:1135765/116‑1 (MQ=255) ggATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTgg > 2:1135765/1‑116 (MQ=255) gATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGga > 3:1581255/1‑148 (MQ=255) cGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTg < 4:1066984/149‑1 (MQ=255) cGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTg < 2:184844/149‑1 (MQ=255) gACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGaa > 3:611100/1‑114 (MQ=255) gACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGaa < 4:611100/114‑1 (MQ=255) gACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTgg > 4:845004/1‑149 (MQ=255) cAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTggcg < 4:684682/149‑1 (MQ=255) aGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGCATGATTggcgg < 4:1388714/149‑1 (MQ=255) aGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaa < 2:700869/111‑1 (MQ=255) ccGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGccc < 3:1886785/149‑1 (MQ=255) gtgATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGgaga > 1:1493092/1‑110 (MQ=255) tgATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttc > 3:762040/1‑149 (MQ=255) tgATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttc > 3:1500871/1‑149 (MQ=255) tgATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttc < 2:1696745/149‑1 (MQ=255) gATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttct < 4:1576143/149‑1 (MQ=255) aTTTTCAAAACGCATTTGTCGGCAGTGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAATCCGGAGACTGGGACAGCACATtgt > 3:1184953/1‑124 (MQ=255) aTTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttctt < 2:208271/149‑1 (MQ=255) aTTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttctt > 1:496624/1‑149 (MQ=255) tttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttcttct < 3:106519/149‑1 (MQ=255) aaaaCGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCt > 4:405544/1‑149 (MQ=255) aaaaCGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCt < 2:412729/149‑1 (MQ=255) aaCGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGt < 1:1331099/149‑1 (MQ=255) cGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTa < 3:373687/149‑1 (MQ=255) cGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTa > 4:1649247/1‑149 (MQ=255) tttGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGa < 1:1561644/149‑1 (MQ=255) gCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAt > 2:1615083/1‑149 (MQ=255) gCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGaa < 3:730647/149‑1 (MQ=255) cAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTAt < 1:725261/149‑1 (MQ=255) cAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTAt > 2:74174/1‑149 (MQ=255) gTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAtt > 1:271713/1‑135 (MQ=255) gTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAtt < 2:271713/135‑1 (MQ=255) gTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTg < 2:552202/149‑1 (MQ=255) tGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTgc < 3:1838053/149‑1 (MQ=255) gTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATgg < 3:853574/127‑1 (MQ=255) tCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTgg < 3:1304522/91‑1 (MQ=255) tCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCaga > 2:1450676/1‑149 (MQ=255) tCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCaga < 3:1333738/149‑1 (MQ=255) tCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTAAAGCCGGAGACTGGGACAGCACATTGTGGATGATTgg > 4:1304522/1‑91 (MQ=255) gtggtgACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAg < 1:1856853/109‑1 (MQ=255) gtggtgACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGt > 1:252900/1‑143 (MQ=255) gtgACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGccc > 2:1509955/1‑86 (MQ=255) gtgACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCaaaaaa < 2:1318652/149‑1 (MQ=255) tgACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTgca > 4:1875769/1‑132 (MQ=255) gACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATc > 2:936024/1‑149 (MQ=255) gACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGGGGCAAAAAATc > 4:218442/1‑149 (MQ=255) aCATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATcc > 2:762757/1‑149 (MQ=255) aCATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGCAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATcc < 1:552341/149‑1 (MQ=255) cATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCg > 3:1677977/1‑149 (MQ=255) aTTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGaa > 1:1757733/1‑120 (MQ=255) aTTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTgc > 1:39603/1‑127 (MQ=255) gAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGa > 3:1552619/1‑104 (MQ=255) gAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTggg > 2:616162/1‑149 (MQ=255) tCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCaga < 4:1435564/122‑1 (MQ=255) tCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCaga > 3:1435564/1‑122 (MQ=255) tCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGTTg < 4:1677977/149‑1 (MQ=255) catcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTAc < 3:537672/97‑1 (MQ=255) catcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTAc > 4:537672/1‑97 (MQ=255) catcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAAc < 2:913313/149‑1 (MQ=255) catcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAAc < 2:23374/149‑1 (MQ=255) atcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAAcc < 4:1773886/149‑1 (MQ=255) tcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtc < 3:681485/65‑1 (MQ=255) atTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGa < 1:1628196/149‑1 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGAt > 3:1128895/1‑149 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGAt > 4:1173327/1‑149 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGAt > 4:710235/1‑149 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACAAGAACTATTGCAGCAGAGCGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGAt > 4:651725/1‑149 (MQ=255) ttCAACCACAGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGAt > 1:866304/1‑149 (MQ=255) cAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTAcc > 4:775801/1‑91 (MQ=255) cAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAAc > 1:992115/1‑96 (MQ=255) cAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:936024/149‑1 (MQ=255) aaCCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAAt < 3:827250/119‑1 (MQ=255) | TCCTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTA > NC_000913/4385058‑4385353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |