| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description | 
| RA | NC_000913 | 4,572,086 | T→C | 5.3% | intergenic (+171/‑328) | yjiS → / → yjiT | DUF1127 family protein/pseudogene | 
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,572,086 | 0 | T | C | 5.3% | 404.1 / 7.9 | 114 | intergenic (+171/‑328) | yjiS/yjiT | DUF1127 family protein/pseudogene | 
| Reads supporting (aligned to +/- strand): ref base T (55/53); new base C (3/3); total (58/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
AATAAAACGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCA  >  NC_000913/4571938‑4572227                                                                                                                                                     |                                                                                                                                             aataaAACGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑tgt                                                                                                                                               >  1:1628175/1‑149 (MQ=255)     aaCGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑Tgtgt                                                                                                                                             >  4:968932/1‑146 (MQ=255)     aaCGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑Tgtgt                                                                                                                                             <  3:968932/146‑1 (MQ=255)          ttttATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTtgac                                                                                                                                     <  1:187757/149‑1 (MQ=255)                  ttttAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACACA‑AGTAATCACTGTGCGTTTTTtga                                                                                                                                      <  2:650847/140‑1 (MQ=38)                           aaGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTATAACTCTCa                                                                                                                    <  3:1168106/149‑1 (MQ=255)                                 taAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTc                                                                                                              <  2:1628175/149‑1 (MQ=255)                                   aaaaTTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTGTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTtga                                                                                                                                      >  4:1097914/1‑123 (MQ=255)                                   aaaaTTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTtga                                                                                                                                      <  3:1097914/123‑1 (MQ=255)                                      aTTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGtttttt                                                                                                                                        >  1:1739753/1‑118 (MQ=255)                                          tCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCattatt                                                                                                               >  2:208015/1‑139 (MQ=255)                                          tCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCattatt                                                                                                               <  1:208015/139‑1 (MQ=255)                                             cGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAActct                                                                                                                      <  3:1152132/129‑1 (MQ=255)                                             cGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAActct                                                                                                                      >  4:1152132/1‑129 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTa                                                                                                                             <  2:1858024/121‑1 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTa                                                                                                                             >  1:1858024/1‑121 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCattat                                                                                                                >  2:531536/1‑134 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCattat                                                                                                                <  1:531536/134‑1 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGt                                                                                                 >  2:1564810/1‑149 (MQ=255)                                              gagaCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGt                                                                                                 >  1:787060/1‑149 (MQ=255)                                                 aCAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAAct                                                                                                                        <  1:682157/123‑1 (MQ=255)                                                   aaTTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCat                                                                                                                   >  1:227018/1‑126 (MQ=255)                                                   aaTTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCat                                                                                                                   <  2:227018/126‑1 (MQ=255)                                                   aaTTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCat                                                                                                                   >  3:1697032/1‑126 (MQ=255)                                                      tcatcaATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTaa                                                                                         <  3:486634/149‑1 (MQ=255)                                                        atcaATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTtgac                                                                                                                                     <  1:1471384/103‑1 (MQ=255)                                                         tcaATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGttttt                                                                                                                                         >  1:276638/1‑98 (MQ=255)                                                            aTAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGc                                                                                                    <  2:1686514/132‑1 (MQ=255)                                                            aTAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGc                                                                                                    >  1:1686514/1‑132 (MQ=255)                                                            aTAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGttt                                                                                   <  2:787060/149‑1 (MQ=255)                                                                          tACAGGAATATCTTCTTCACTATCCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAg                                                                     <  3:1163740/149‑1 (MQ=255)                                                                           aCAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGttt                                                                                               >  1:257851/1‑122 (MQ=255)                                                                           aCAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGttt                                                                                               <  2:257851/122‑1 (MQ=255)                                                                            cAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGtt                                                                   >  3:1465421/1‑149 (MQ=255)                                                                              ggAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaa                                                                 <  1:1564810/149‑1 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTTATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGGTATTGTGCAGTTtc                                                                                              >  4:12623/1‑119 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTtc                                                                                              <  3:12623/119‑1 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTg                                                                          >  3:1546566/1‑139 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTg                                                                          <  4:1546566/139‑1 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaaa                                                                >  1:1806470/1‑149 (MQ=255)                                                                               gAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaaa                                                                >  3:992131/1‑149 (MQ=255)                                                                                 atatCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAActct                                                                                                                      <  1:1578642/93‑1 (MQ=255)                                                                                 atatCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAActct                                                                                                                      >  2:1578642/1‑93 (MQ=255)                                                                                   atCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTc                                                            >  2:1322897/1‑149 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGtttttt                                                                                                                                        <  2:618360/72‑1 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGtttttt                                                                                                                                        >  1:618360/1‑72 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGaaa                                                                      <  4:298799/138‑1 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGaaa                                                                      <  4:52118/138‑1 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGaaa                                                                      >  3:52118/1‑138 (MQ=255)                                                                                    tcttctTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGaaa                                                                      >  3:298799/1‑138 (MQ=255)                                                                                      ttcttcACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaaa                                                                <  2:477097/142‑1 (MQ=255)                                                                                      ttcttcACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaaa                                                                >  1:477097/1‑142 (MQ=255)                                                                                          tcACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAAt                                                               >  3:119398/1‑139 (MQ=255)                                                                                          tcACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAAt                                                               <  4:119398/139‑1 (MQ=255)                                                                                          tcACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACt                                                     <  4:1465421/149‑1 (MQ=255)                                                                                              tAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTaaa                                                                <  2:810959/134‑1 (MQ=255)                                                                                               aaCCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATa                                                <  2:1806470/149‑1 (MQ=255)                                                                                               aaCCTCTTTAAACTCATGTCGATAACGGTCAAAAAACACA‑AGTAATCACTGTGCGTTTTTtg                                                                                                                                       <  1:901346/62‑1 (MQ=2)                                                                                                 ccTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGttt                                                                                   >  3:1773675/1‑112 (MQ=255)                                                                                                 ccTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGttt                                                                                   <  4:1773675/112‑1 (MQ=255)                                                                                                   tctTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtt                                                                                    <  3:280553/109‑1 (MQ=255)                                                                                                   tctTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtt                                                                                    >  4:280553/1‑109 (MQ=255)                                                                                                   tctTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACttt                                            >  1:1319253/1‑149 (MQ=255)                                                                                                   tctTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTCTTTGACTGACTTTACAACTCTCATTATTCGc                                                                                                            >  4:1302679/1‑85 (MQ=255)                                                                                                     tttAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACtttt                                           <  3:1332846/148‑1 (MQ=255)                                                                                                     tttAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACtttt                                           >  4:1332846/1‑148 (MQ=255)                                                                                                        aaaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtttt                                                                                  >  4:879153/1‑106 (MQ=255)                                                                                                        aaaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtttt                                                                                  >  4:977413/1‑106 (MQ=255)                                                                                                        aaaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtttt                                                                                  <  3:879153/106‑1 (MQ=255)                                                                                                        aaaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGtttt                                                                                  <  3:977413/106‑1 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTGAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      <  1:1155505/149‑1 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTAc                                                      >  1:1304099/1‑133 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTAc                                                      <  2:1304099/133‑1 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      <  1:1167002/149‑1 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      >  2:1167002/1‑149 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      <  2:1503112/149‑1 (MQ=255)                                                                                                         aaCTCATGTCGATAACGGTCAAAAAACACACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      >  2:1155505/1‑149 (MQ=255)                                                                                                            tCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGt                                                                    >  1:69694/1‑116 (MQ=255)                                                                                                            tCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGt                                                                    <  2:69694/116‑1 (MQ=255)                                                                                                            tCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGtt                                   >  1:796152/1‑149 (MQ=255)                                                                                                             cATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGttt                                  >  2:565764/1‑149 (MQ=255)                                                                                                                 tCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTgaga                              <  2:1319253/149‑1 (MQ=255)                                                                                                                     tAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGttt                                  >  3:253134/1‑141 (MQ=255)                                                                                                                     tAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGttt                                  <  4:253134/141‑1 (MQ=255)                                                                                                                      aaCGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      >  2:790945/1‑136 (MQ=255)                                                                                                                      aaCGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGAtt                                      <  1:790945/136‑1 (MQ=255)                                                                                                                          gTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTc                     >  3:314284/1‑149 (MQ=255)                                                                                                                          gTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTc                     <  1:1322897/149‑1 (MQ=255)                                                                                                                          gTCAAAAAACACA‑AGTAATCACTGTGCGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTga                                <  4:264189/138‑1 (MQ=38)                                                                                                                           tCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACt                                                     <  2:1616385/116‑1 (MQ=255)                                                                                                                           tCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACt                                                     >  1:1616385/1‑116 (MQ=255)                                                                                                                           tCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCa                    >  1:1829098/1‑149 (MQ=255)                                                                                                                            cAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCAt                   <  2:236763/149‑1 (MQ=255)                                                                                                                             aaaaaaCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTg                                                    >  1:804061/1‑115 (MQ=255)                                                                                                                             aaaaaaCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTg                                                    <  2:804061/115‑1 (MQ=255)                                                                                                                             aaaaaaCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCAtt                  >  1:410017/1‑149 (MQ=255)                                                                                                                                 aaCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGaa              >  3:544770/1‑149 (MQ=255)                                                                                                                                 aaCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGaa              <  4:558636/149‑1 (MQ=255)                                                                                                                                  aCGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGaaa             <  2:796152/149‑1 (MQ=255)                                                                                                                                             ttACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCa  <  4:314284/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                             AATAAAACGTTTTTATGTTTTTAAATTAAGTTATAAAAATTTTCCCGAGACAATTCATCAATAGGTATGGAGTGTACAGGAATATCTTCTTCACTAACCTCTTTAAACTCATGTCGATAACGGTCAAAAAACGCACAGTGATTACT‑TGTGTTTTTTGACTGACTTTACAACTCTCATTATTCGCTATTGTGCAGTTTCTCTAATTGTTTTATACCCTGGAAAGTTAAATGTCAGCTACTGAATACTTTTTGATTGTTTGAGATTTATTTTCATTTGAAATTATAAAATCA  >  NC_000913/4571938‑4572227 | 
| Alignment Legend | 
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG | 
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑ |