| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 747,902 | C→G | 10.0% | intergenic (‑133/+19) | abrB ← / ← ybgO | regulator of aidB expression; inner membrane protein/putative fimbrial protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 747,902 | 0 | C | G | 10.0% | 307.4 / 21.4 | 93 | intergenic (‑133/+19) | abrB/ybgO | regulator of aidB expression; inner membrane protein/putative fimbrial protein |
| Reads supporting (aligned to +/- strand): ref base C (40/41); new base G (4/5); total (46/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
AACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTG > NC_000913/747761‑748041 | aaCTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGc > 2:1413829/1‑149 (MQ=255) tGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGcatc > 1:81494/1‑149 (MQ=255) tCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑GCCGCCGGAAAGGGcat > 2:230590/1‑143 (MQ=255) tCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑GCCGCCGGAAAGGGcat < 1:230590/143‑1 (MQ=255) cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑GCCGCCGGAAAGGGca < 4:811127/131‑1 (MQ=255) cTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑GCCGCCGGAAAGGGca > 3:811127/1‑131 (MQ=255) tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtata > 1:580475/1‑149 (MQ=255) tCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtata < 3:782583/149‑1 (MQ=255) attattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCaaa > 3:1310744/1‑123 (MQ=255) attattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtat > 1:1089568/1‑146 (MQ=255) attattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtat < 2:1089568/146‑1 (MQ=255) attattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAACAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCaaa < 4:1310744/123‑1 (MQ=255) ttattTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGtt > 1:782835/1‑149 (MQ=255) attTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTaa < 1:1413829/149‑1 (MQ=255) tttCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATc < 2:580475/149‑1 (MQ=255) tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAg > 4:1161464/1‑115 (MQ=255) tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAg < 3:1161464/115‑1 (MQ=255) tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGt > 3:1397991/1‑134 (MQ=255) tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGt < 4:1397991/134‑1 (MQ=255) tctTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTaa > 3:1478586/1‑149 (MQ=255) tttGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCACAg < 3:1256725/113‑1 (MQ=255) tttGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAg > 4:1256725/1‑113 (MQ=255) ttGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTaaaaa < 2:81494/149‑1 (MQ=255) gtgtATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca > 4:1622346/1‑149 (MQ=255) aTCGATACAGCATAAAGAAAGCTGGGTCAGGAAAAAATGACAGCAATCAAGGAAAAGGGGGAAATCAACAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGTGAAATCAGTTATAGTTAATCTTAAACAGcaccac > 3:1176214/1‑149 (MQ=255) tACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAg > 3:204777/1‑118 (MQ=255) tACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAg < 4:204777/118‑1 (MQ=255) gCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGaa < 2:782835/149‑1 (MQ=255) cATAAAGAAAGCTGGGCCAGAAAAAATTAGCAGCAAGCAAGGAGAAGGGGAAAATCAGCGATTCTCTGACAGAGATGCCCTTT‑CCGGCGGCAATGGGCATCATGGTAAATCAGATATAGGTAATCTTTAAAAGCACCACTGTATCGAAg < 4:1176214/149‑1 (MQ=255) aTAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg > 1:1849969/1‑149 (MQ=255) aTAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAgg > 2:749953/1‑149 (MQ=255) tAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca > 1:751804/1‑133 (MQ=255) tAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca < 2:751804/133‑1 (MQ=255) tAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAggg < 3:1865766/149‑1 (MQ=255) aaagCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAg < 4:1478586/149‑1 (MQ=255) tGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCa < 1:304428/100‑1 (MQ=255) tGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCa > 2:304428/1‑100 (MQ=255) ccAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAg > 3:480509/1‑117 (MQ=255) ccAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAg < 4:480509/117‑1 (MQ=255) ccAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgg < 2:1849969/149‑1 (MQ=255) gAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcac > 4:324776/1‑116 (MQ=255) gAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGcac < 3:324776/116‑1 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCa > 3:1295548/1‑87 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCa < 4:1295548/87‑1 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtata > 1:839314/1‑93 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTtata < 2:839314/93‑1 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGcc < 4:1701216/129‑1 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGcc > 3:1701216/1‑129 (MQ=255) aaTAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTg < 1:749953/149‑1 (MQ=255) aGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGATATGCCCTTTGCCGCCGG‑AAAGGGc > 3:1192769/1‑67 (MQ=25) aGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGATATGCCCTTT‑GCCGCCGGAAAGGGc < 4:1192769/67‑1 (MQ=25) aGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt > 4:1366067/1‑142 (MQ=255) aGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt < 3:1366067/142‑1 (MQ=255) aaTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAgg < 2:1419948/62‑1 (MQ=255) aaTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAgg > 1:1419948/1‑62 (MQ=255) aaTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa < 2:282718/147‑1 (MQ=255) aaTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa > 1:282718/1‑147 (MQ=255) aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgggg > 3:970/1‑132 (MQ=255) aTCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATgggg < 4:970/132‑1 (MQ=255) tCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGaa > 4:419159/1‑149 (MQ=255) cAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGaaa < 3:419159/149‑1 (MQ=255) cAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGaaa < 3:1622346/149‑1 (MQ=255) aGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca > 2:1174312/1‑96 (MQ=255) aGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca > 4:872349/1‑96 (MQ=255) aGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca < 1:1174312/96‑1 (MQ=255) aGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGca < 3:872349/96‑1 (MQ=255) gAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTc > 2:1718664/1‑149 (MQ=255) aaGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATc > 1:440628/1‑81 (MQ=255) aaGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATc < 2:440628/81‑1 (MQ=255) gggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt < 3:1759877/126‑1 (MQ=255) gggAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCt > 4:1759877/1‑126 (MQ=255) aaaaTCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa < 1:950518/131‑1 (MQ=255) aaaaTCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa > 2:950518/1‑131 (MQ=255) aaaTCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAg < 1:1718664/149‑1 (MQ=255) aGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGc < 1:1216587/78‑1 (MQ=255) aGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGc > 2:1216587/1‑78 (MQ=255) tGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTATATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGAcc > 1:32747/1‑149 (MQ=255) gaTGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGt < 2:32747/149‑1 (MQ=255) tGCCCTTTGCCGCCGG‑AAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa < 1:103437/106‑1 (MQ=255) tGCCCTTTGCCGCCGG‑AAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa > 2:103437/1‑106 (MQ=255) tGCCCTTT‑GCCGCCGGAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACa < 1:1295799/144‑1 (MQ=255) tGCCCTTT‑GCCGCCGGAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACa > 2:1295799/1‑144 (MQ=255) gCCCTTT‑GCCGCCGGAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAc > 3:963303/1‑149 (MQ=255) gCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAc > 2:1209891/1‑149 (MQ=255) gCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCAc > 4:1737213/1‑149 (MQ=255) ccTTT‑GCCGCCGGAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa < 2:1535409/103‑1 (MQ=255) ccTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa < 2:1616528/103‑1 (MQ=255) ccTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGa > 1:1616528/1‑103 (MQ=255) cTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGACTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTgg > 2:739237/1‑149 (MQ=255) tt‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTg < 1:1209891/149‑1 (MQ=255) tt‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTg < 3:1737213/149‑1 (MQ=255) cggcggCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtttt < 2:929176/121‑1 (MQ=255) cggcggCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGtttt > 1:929176/1‑121 (MQ=255) gcggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTa > 2:1448839/1‑125 (MQ=255) gcggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTa < 1:1448839/125‑1 (MQ=255) ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTa < 4:712750/123‑1 (MQ=255) ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTa > 3:712750/1‑123 (MQ=255) ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTgg > 1:1206748/1‑140 (MQ=255) ggcAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTgg < 2:1206748/140‑1 (MQ=255) | AACTGGCATCCTTCGCTCCCTCATTATTTTCTCTTTGGTGTATCGATACAGCATAAAGAAAGCTGGGCCAGGAAAAAATAACAGCAATCAAGGAAAAGGGGAAAATCAGCAATTTTCTGAAAGAGATGCCCTTT‑CCGGCGGCAAAGGGCATCATGGTAAATCAGTTATAGTTAATCTTAAAAAGCACCACTGTATCGAAGGGGCCAGCCTCGATGGGGGTGCCTGGAATGGACGAAAGTTCAGCCGTATAGGTTTTTTCGTAGACCAACATGTCACTGGTG > NC_000913/747761‑748041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |