| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,256,416 | A→T | 100% | intergenic (‑464/+305) | ycgV ← / ← ychF | putative adhesin/catalase inhibitor protein; ATPase, K+‑dependent, ribosome‑associated |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,256,416 | 0 | A | T | 98.7% | 576.1 / ‑1.7 | 152 | intergenic (‑464/+305) | ycgV/ychF | putative adhesin/catalase inhibitor protein; ATPase, K+‑dependent, ribosome‑associated |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base T (79/71); total (80/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 152 total aligned reads displayed.
CTAATTAGTTATGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTACTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATGTCTTT > NC_000913/1256271‑1256558 | cTAATTAGTTATGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTg < 3:1316186/149‑1 (MQ=255) aGTTATGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATc < 3:757277/149‑1 (MQ=255) tATGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCAtt < 3:1086739/149‑1 (MQ=255) tGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCAtttt > 2:714588/1‑149 (MQ=255) tGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCAtttt > 2:294620/1‑149 (MQ=255) gATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCat > 4:902985/1‑149 (MQ=255) aTCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTgg > 2:545685/1‑149 (MQ=255) tGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGc < 1:524749/149‑1 (MQ=255) gCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGGTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCg > 3:743380/1‑149 (MQ=255) aaaaCAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAt > 1:1435959/1‑149 (MQ=255) aaaCAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAtt < 4:462657/149‑1 (MQ=255) aaaCAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAtt < 1:294620/149‑1 (MQ=255) aaCAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCt < 2:693528/121‑1 (MQ=255) aaCAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCt > 1:693528/1‑121 (MQ=255) cgcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCt < 2:1435959/149‑1 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCGTTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCtt > 3:1290210/1‑112 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTc > 2:858771/1‑107 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCtt < 4:1290210/112‑1 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTg < 3:552265/131‑1 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCtg > 4:770619/1‑149 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCtg > 4:1627276/1‑149 (MQ=255) gcCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTACTGGTTATCATTTTCAt < 2:633426/109‑1 (MQ=255) ccATTTTTGCATTACTAATAGGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAt > 2:1831645/1‑136 (MQ=255) ccATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAt < 1:1831645/136‑1 (MQ=255) ccATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCtgt > 3:1159157/1‑149 (MQ=255) tttttGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGaa > 3:1549934/1‑149 (MQ=255) ttGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAggg < 4:1549934/149‑1 (MQ=255) gCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAggggg < 3:902985/149‑1 (MQ=255) tACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTg < 4:1737401/111‑1 (MQ=255) tACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGAt > 2:697656/1‑130 (MQ=255) taataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCAt > 2:1141488/1‑93 (MQ=255) taataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGAtgt > 3:49323/1‑149 (MQ=255) taataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTCTGCTTCTGGTTATCATTTTCAt < 1:1141488/93‑1 (MQ=255) aataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGAtgtg > 2:1148123/1‑149 (MQ=255) ataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGcc > 3:72309/1‑97 (MQ=255) ataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGcc < 4:72309/97‑1 (MQ=255) ataaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATgtgt > 2:1081442/1‑149 (MQ=255) taaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTa < 1:714588/149‑1 (MQ=255) taaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTa < 1:1148123/149‑1 (MQ=255) aaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAg < 1:545685/149‑1 (MQ=255) aaGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAg < 3:770619/149‑1 (MQ=255) gAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGa < 4:64017/104‑1 (MQ=255) gCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTa < 1:1486767/140‑1 (MQ=255) gCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTa > 2:1486767/1‑140 (MQ=255) aaaaaaCATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGAtgt > 1:623635/1‑135 (MQ=255) aaaaaCATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATc > 4:1354219/1‑113 (MQ=255) aaaaaCATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATc < 3:1354219/113‑1 (MQ=255) aaaaCATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAAc < 3:862047/149‑1 (MQ=255) cATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTAc < 1:1418637/149‑1 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCAtt < 3:472650/67‑1 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCAtt > 4:472650/1‑67 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGc > 2:1225235/1‑91 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGc > 4:1403099/1‑91 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGc < 3:1403099/91‑1 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGc < 1:1225235/91‑1 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGAt > 4:533353/1‑106 (MQ=255) aTCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGAt < 3:533353/106‑1 (MQ=255) atatTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTtat > 4:1847646/1‑149 (MQ=255) atatTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTtat > 2:1466166/1‑149 (MQ=255) ttCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGGTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTATGATCAGCTGTGTAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATc > 3:375353/1‑149 (MQ=255) ttCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATa < 1:1059025/130‑1 (MQ=255) ttCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATa > 2:1059025/1‑130 (MQ=255) ttCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACt > 2:458658/1‑138 (MQ=255) ttCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACt < 1:458658/138‑1 (MQ=255) aTTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGtt < 1:695817/141‑1 (MQ=255) ttttGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGc < 3:1847646/149‑1 (MQ=255) ttttGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGc < 1:1466166/149‑1 (MQ=255) tCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCCTATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTAc < 2:1179363/130‑1 (MQ=255) tCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTAc > 3:1820937/1‑130 (MQ=255) tCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTAc > 1:1179363/1‑130 (MQ=255) aaTGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAttt < 3:1666388/82‑1 (MQ=255) aaTGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAttt > 4:1666388/1‑82 (MQ=255) aaTGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATgaga > 4:299874/1‑149 (MQ=255) tGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATg > 1:985070/1‑144 (MQ=255) tGGGTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATg < 2:985070/144‑1 (MQ=255) gggTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGatat > 2:1870142/1‑149 (MQ=255) gggTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGatag > 4:1216907/1‑148 (MQ=255) ggTTTTCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATc < 1:81770/149‑1 (MQ=255) ttttCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATgag < 4:785274/142‑1 (MQ=255) ttCTGGCCTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAACAACTTACGTTATATCACTGCTAATGAGATATCCGGc < 4:1159157/149‑1 (MQ=255) ccTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGa < 1:1870142/149‑1 (MQ=255) cTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAg > 2:1684584/1‑97 (MQ=255) cTATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGaa < 4:375353/149‑1 (MQ=255) tATCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAac < 4:502446/149‑1 (MQ=255) aTCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTa > 3:293464/1‑94 (MQ=255) aTCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAaca > 4:1147774/1‑149 (MQ=255) tCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGAt < 2:379774/58‑1 (MQ=255) tCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGAtgt < 4:988469/90‑1 (MQ=255) tCGTTGTTATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGAtgt > 3:988469/1‑90 (MQ=255) gttgttATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAAt < 2:527168/125‑1 (MQ=255) gttgttATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACtt > 3:1484590/1‑149 (MQ=255) ttgttATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTa > 4:91166/1‑149 (MQ=255) gttATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGaa > 4:269058/1‑141 (MQ=255) ttATTGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATGt < 3:990761/149‑1 (MQ=255) ttGTGCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAAttt > 3:1631655/1‑55 (MQ=255) tgtgCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATGTCttt < 1:1081442/149‑1 (MQ=255) gtgCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATg < 2:208774/143‑1 (MQ=255) gtgCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATg > 1:208774/1‑143 (MQ=255) tgCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGat < 4:1078051/120‑1 (MQ=255) tgCTTCTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGat > 3:1078051/1‑120 (MQ=255) | CTAATTAGTTATGGGAATTTCGCTTGATGTATCTGCATAACAAAAACAATATGCGCCATTTTTGCATTACTAATAAGAAAAAGCAAAAAACATCGATATTCATTTTTGGTCAATGGGTTTTCTGGCCTATCGTTGTTATTGTGCTACTGGTTATCATTTTCATCTTGCCAGCATATTGGAGCGTGATCAATTTTGATCAGCTGTGAAGGGGGCTGATGTGTAGTGATACAAAAACTTACGTTATATCACTGCTAATGAGATATCCGGCATCTGAACACTTATGTCTTT > NC_000913/1256271‑1256558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |