| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,180,043 | C→T | 100% | T408M (ACG→ATG) | yegT → | nucleoside transporter, low affinity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,180,043 | 0 | C | T | 98.1% | 766.5 / 1.8 | 207 | T408M (ACG→ATG) | yegT | nucleoside transporter, low affinity |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base T (102/100); total (104/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.35e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 207 total aligned reads displayed.
GATGATGGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGCCGCGTTAAA > NC_000913/2179897‑2180190 | tgGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATc > 4:887700/1‑149 (MQ=255) tgGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATc > 3:477600/1‑149 (MQ=255) aaaGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAgg > 2:1278249/1‑149 (MQ=255) aaaGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAgg > 2:968875/1‑149 (MQ=255) gATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGt < 1:287328/147‑1 (MQ=255) tGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCgat > 3:669822/1‑149 (MQ=255) ttCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCgatga > 4:1659914/1‑149 (MQ=255) ttCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGCGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCgatga > 1:971205/1‑149 (MQ=255) cGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATc < 1:1047382/149‑1 (MQ=255) gCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATcg > 2:533576/1‑149 (MQ=255) gCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATcg > 4:607301/1‑149 (MQ=255) ttATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATcgcg > 3:869845/1‑149 (MQ=255) aTCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGat > 3:1828577/1‑149 (MQ=255) aTCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGat < 4:1359644/149‑1 (MQ=255) aTCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGat > 2:1386552/1‑149 (MQ=255) aCCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGt > 2:453412/1‑149 (MQ=255) aCCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGt < 4:935753/149‑1 (MQ=255) ccGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGtt < 1:453412/149‑1 (MQ=255) ccGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGtt < 1:533576/149‑1 (MQ=255) ggTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGa < 1:958406/149‑1 (MQ=255) gTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGac < 4:869188/149‑1 (MQ=255) aaaCGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGacac > 2:1800846/1‑149 (MQ=255) aCGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACaa > 4:31276/1‑149 (MQ=255) aCGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACaa < 2:1135310/149‑1 (MQ=255) aCGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACaa < 3:1542984/149‑1 (MQ=255) aCGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTCTACCGGGAATCCGAATACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACaa < 3:717780/149‑1 (MQ=255) ggACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAgg < 1:1356738/149‑1 (MQ=255) gactgactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGa > 3:1363920/1‑141 (MQ=255) gactgactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAggg < 3:327841/149‑1 (MQ=255) gactgactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCCTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGa < 4:1363920/141‑1 (MQ=255) tgactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGa > 1:1574222/1‑138 (MQ=255) tgactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGaa > 4:132441/1‑149 (MQ=255) gactTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAg < 4:222825/149‑1 (MQ=255) actTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGt > 2:635600/1‑149 (MQ=255) tttCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGc > 3:1673278/1‑102 (MQ=255) tttCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGc < 4:1673278/102‑1 (MQ=255) tttCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATcgc > 4:664170/1‑121 (MQ=255) tttCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTa > 1:66468/1‑149 (MQ=255) tttCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTa > 3:1090232/1‑149 (MQ=255) ttCAACTGGTACGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTaa > 3:116468/1‑149 (MQ=255) tCAACTGGTCCGGGATGTGGTCTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTTTTTATTTTCTTCCGGAAATCCGAAAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTaaa < 3:1845507/149‑1 (MQ=255) tCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTaaa < 4:559126/149‑1 (MQ=255) aaCTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATg > 3:642692/1‑149 (MQ=255) aaCTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATg > 2:1476164/1‑149 (MQ=255) aCTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATc > 2:1657215/1‑114 (MQ=255) tCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACa > 2:1761148/1‑149 (MQ=255) gggATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGaa < 1:1386552/149‑1 (MQ=255) gggATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGaa < 3:1659914/149‑1 (MQ=255) gggATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGaa < 4:670789/149‑1 (MQ=255) gATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGa > 3:290110/1‑139 (MQ=255) tgGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGt > 1:1185027/1‑146 (MQ=255) gACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCga > 1:907005/1‑93 (MQ=255) gACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATtct > 1:1853778/1‑149 (MQ=255) aCTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATtctc < 1:1761148/149‑1 (MQ=255) cTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCg < 2:1045736/149‑1 (MQ=255) tttCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCgg > 4:484163/1‑149 (MQ=255) ttCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGt > 3:566704/1‑149 (MQ=255) ggTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTa < 3:1280046/149‑1 (MQ=255) gatgatTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATgg > 4:1075122/1‑149 (MQ=255) atTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGaa < 3:1450591/122‑1 (MQ=255) atTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGaa > 4:1450591/1‑122 (MQ=255) atTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAg > 4:1026806/1‑149 (MQ=255) ccATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGt < 1:1268176/87‑1 (MQ=255) cATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGaaa > 4:77482/1‑111 (MQ=255) cATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGaaa < 3:77482/111‑1 (MQ=255) ttATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAATGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAg > 1:1816127/1‑149 (MQ=255) ttATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAg > 2:415204/1‑149 (MQ=255) tATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAgg < 1:635600/149‑1 (MQ=255) aTCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAggg < 1:415204/149‑1 (MQ=255) ccGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAg < 2:1584275/87‑1 (MQ=255) tGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCTAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTa < 4:1426286/126‑1 (MQ=255) tGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCTAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTa > 3:1426286/1‑126 (MQ=255) tGTTCATGATTTTTTTCCGCGAATCCGACAGCGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATgg < 1:1450149/149‑1 (MQ=255) tGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGa < 2:1102497/95‑1 (MQ=255) tGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGa > 1:1102497/1‑95 (MQ=255) ttCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGtt > 2:1226806/1‑71 (MQ=255) ttCATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAggg > 3:1354841/1‑137 (MQ=255) ttCATGATTTTATTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATgggg > 1:1619658/1‑149 (MQ=255) cATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGAt > 4:112522/1‑149 (MQ=255) cATGATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGAt < 4:1828577/149‑1 (MQ=255) gATTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATggg > 2:340832/1‑120 (MQ=255) aTTTTTTTCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGa > 2:1828761/1‑67 (MQ=255) ttttttCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTc > 1:1022695/1‑149 (MQ=255) ttCCGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATg > 2:912997/1‑134 (MQ=255) ccGCGAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCt > 4:1626051/1‑149 (MQ=255) gcgAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCttt > 1:756489/1‑149 (MQ=255) gAATCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTgg < 3:535318/149‑1 (MQ=255) aaTCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGc > 2:773716/1‑111 (MQ=255) aaTCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGc > 1:1881394/1‑149 (MQ=255) aaTCCGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGc < 3:1026806/149‑1 (MQ=255) ccGACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCtt < 3:163384/97‑1 (MQ=255) gACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGc > 4:473149/1‑149 (MQ=255) gACAACGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGc > 4:1222808/1‑149 (MQ=255) aaCGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGc > 1:79680/1‑149 (MQ=255) aCGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGcc < 3:90324/149‑1 (MQ=255) aCGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGcc > 4:1387018/1‑149 (MQ=255) cGAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCg > 4:148127/1‑130 (MQ=255) cGAAATTATGGCTAACAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCg < 3:148127/130‑1 (MQ=255) gAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCAc > 3:805977/1‑141 (MQ=255) gAAATTATGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCAc < 4:805977/141‑1 (MQ=255) | GATGATGGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGCCGCGTTAAA > NC_000913/2179897‑2180190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |