| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,908,486 | G→C | 7.7% | A394G (GCC→GGC) | pyrG ← | CTP synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,908,486 | 0 | G | C | 7.7% | 642.7 / 32.3 | 183 | A394G (GCC→GGC) | pyrG | CTP synthetase |
| Reads supporting (aligned to +/- strand): ref base G (74/94); new base C (8/6); total (83/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 189 total aligned reads displayed.
TGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGATTGCGTC > NC_000913/2908338‑2908634 | tgCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTgg < 4:1536736/149‑1 (MQ=255) gcgcCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGc < 3:1727015/149‑1 (MQ=255) gagaCGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACAt > 1:1779390/1‑149 (MQ=255) aCGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGCCAACATgga < 3:1605513/149‑2 (MQ=255) gCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa > 3:423643/1‑149 (MQ=255) aTGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGc > 1:1065896/1‑149 (MQ=255) aTGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGc > 1:70438/1‑149 (MQ=255) tGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCg < 3:152742/149‑1 (MQ=255) tACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTaa < 2:1128394/149‑1 (MQ=255) tACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTaa < 1:716480/149‑1 (MQ=255) gccgAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCaa < 1:729068/149‑1 (MQ=255) ccgAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAAt < 3:871404/149‑1 (MQ=255) cgAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAAtt < 3:220552/149‑1 (MQ=255) gaTCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc < 4:1507323/149‑1 (MQ=255) gaTCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc < 4:10856/149‑1 (MQ=255) aTCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa < 1:1145192/133‑1 (MQ=255) aTCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa > 2:1145192/1‑133 (MQ=255) cGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACa < 4:178667/125‑1 (MQ=255) ctctTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCAc < 2:1395351/149‑1 (MQ=255) tcttctCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCAcc > 4:624885/1‑149 (MQ=255) ttctCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCaa < 4:128560/118‑1 (MQ=255) ttctCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCaa > 3:128560/1‑118 (MQ=255) tACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGTCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATAccc > 4:1077970/1‑149 (MQ=255) tACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATAccc > 3:1106526/1‑149 (MQ=255) cGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAg < 2:1065896/149‑1 (MQ=255) cGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAg > 1:793783/1‑149 (MQ=255) cTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCaa > 3:1557800/1‑149 (MQ=255) ttCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAAt < 3:1613204/119‑1 (MQ=255) ttCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAAt > 4:1613204/1‑119 (MQ=255) tCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAAt > 1:1040832/1‑149 (MQ=255) tCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAAt > 1:920983/1‑149 (MQ=255) gTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCa < 4:452956/149‑1 (MQ=255) gCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt < 2:793783/149‑1 (MQ=255) ccGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGAt < 1:85362/148‑1 (MQ=255) gTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCTATGTTGCCAACATGgagaa < 3:1568600/101‑2 (MQ=255) ttttCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa > 1:396052/1‑99 (MQ=255) ttttCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa < 2:396052/99‑1 (MQ=255) tttCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGa < 3:954576/149‑1 (MQ=255) ttCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGaa < 3:354749/149‑1 (MQ=255) tCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATAtt < 3:604730/149‑1 (MQ=255) cgcgCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTg < 1:453850/149‑1 (MQ=255) cACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGtt > 1:700113/1‑146 (MQ=255) cACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGtt < 2:700113/146‑1 (MQ=255) aCTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATcccc > 3:1672821/1‑116 (MQ=255) aCTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATAccc < 4:1672821/116‑1 (MQ=255) aCTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCa > 2:1664345/1‑149 (MQ=255) cTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCTAGGCAAATGCCCAGATAAg < 3:1119107/134‑1 (MQ=255) cTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCAc > 4:1709116/1‑149 (MQ=255) gTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGa < 2:859525/81‑1 (MQ=255) gTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACgcgc > 1:362774/1‑149 (MQ=255) cAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAg > 2:360700/1‑108 (MQ=255) cAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAAc < 4:1557800/149‑1 (MQ=255) aGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATaa < 4:27518/123‑1 (MQ=255) gcgcCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc < 3:291879/89‑1 (MQ=255) gcgcCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAAcgc > 1:643217/1‑149 (MQ=255) ccACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAAcgc < 3:1055560/146‑1 (MQ=255) cacaACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCgg > 1:1867320/1‑149 (MQ=255) cacaACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCgg > 4:1200729/1‑149 (MQ=255) caACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGc > 3:895163/1‑108 (MQ=255) caACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGc < 4:895163/108‑1 (MQ=255) caACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTc < 4:423643/149‑1 (MQ=255) aaCCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATAtt < 1:1303403/123‑1 (MQ=255) cGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTaa < 3:533322/149‑1 (MQ=255) tACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCAt < 2:362774/149‑1 (MQ=255) cTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCa > 3:719458/1‑77 (MQ=255) cAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTc < 2:643217/149‑1 (MQ=255) tCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTAc < 3:1689204/149‑1 (MQ=255) cTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACg < 2:1867320/149‑1 (MQ=255) tGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAAc > 1:1655921/1‑64 (MQ=255) tGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGc > 4:1118061/1‑149 (MQ=255) gCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCa > 2:740642/1‑149 (MQ=255) acaAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAg < 1:21012/94‑1 (MQ=255) caAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGa < 2:222508/149‑1 (MQ=255) aaaTTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATaa < 3:1378036/91‑1 (MQ=255) aaaTTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATaa > 4:1378036/1‑91 (MQ=255) aaTTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATa < 3:76712/149‑1 (MQ=255) gTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTaa > 2:1100494/1‑121 (MQ=255) gTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTaa < 1:1100494/121‑1 (MQ=255) gTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGaa > 2:566355/1‑149 (MQ=255) gTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGc < 1:577380/140‑1 (MQ=255) gTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGc > 2:577380/1‑140 (MQ=255) ttGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGcc < 4:943496/149‑1 (MQ=255) gTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTa > 4:1014223/1‑149 (MQ=255) tcgccATTTTGCCAACATGGAGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACg > 2:1033861/4‑149 (MQ=255) tcgccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTa > 4:350840/4‑120 (MQ=255) tcgccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACg > 1:1520149/4‑149 (MQ=255) tcCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCtt < 4:572012/115‑1 (MQ=255) tcCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGa < 2:384743/148‑1 (MQ=255) tcCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGa > 1:384743/1‑148 (MQ=255) gccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGc > 2:804203/2‑139 (MQ=255) ccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATc < 3:806582/107‑1 (MQ=255) ccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATc > 4:806582/1‑107 (MQ=255) ccATGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAgg > 1:339808/1‑149 (MQ=255) aTGTTGCCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGAt < 2:1520149/149‑1 (MQ=255) tGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAg < 2:1246185/66‑1 (MQ=255) tGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACCCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGAtt > 3:315361/1‑149 (MQ=255) ttGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCa < 1:1472646/135‑1 (MQ=255) ttGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGATTGc < 4:733636/149‑1 (MQ=255) ttGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGATTGc > 3:1769587/1‑149 (MQ=255) gCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGATTGCGTc < 4:315361/149‑1 (MQ=255) | TGCGCCGAGACGCATGGTACCGCCGAGATCGCTCTTCTCGCTACGAACTTCAACGTTGCCGTTTTCATCGCGCCACTCGGTAATCAGCGCCACAACCGGGTACTTACAGTCTGGCACAAATTCCGTAGAGTTGGCGTTCTCCATGTTGGCAACATGGCGAGCGTAATCAATTAACGCCACCTGCATACCCAGGCAAATGCCCAGATAAGGAATATTGTTCTCACGCGCAAAACGCGCGGTCGTAATCATGCCTTCTACGCCACGATAGCCGAAACCGCCAGGTACGAGGATTGCGTC > NC_000913/2908338‑2908634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |