| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,015,585 | G→T | 5.1% | M142I (ATG→ATT) ‡ | mocA → | CTP:molybdopterin cytidylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,015,585 | 0 | G | T | 5.1% | 275.1 / 2.7 | 78 | M142I (ATG→ATT) ‡ | mocA | CTP:molybdopterin cytidylyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (33/41); new base T (2/2); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
AATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTATCATAATGATAAGGAATCACTGATTT > NC_000913/3015322‑3015817 | aaTGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCa < 2:436260/275‑1 (MQ=255)aaTGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAAATTATGCGCAAGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCa < 2:74219/275‑1 (MQ=255) aaCCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCg > 2:126642/1‑275 (MQ=255) gagCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAgg < 2:68174/275‑1 (MQ=255) attCACAACCCAGATTATGCGCAGAGTTTACTAACATCCGTCAAAACCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGCAAAATCTGGTCGTTACGAAATGATGGCGCAATGCTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAGCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGga < 2:432983/273‑1 (MQ=255) aaCCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGCGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCACCTGCCATCCGACTTTAGTGTCAAAACCATGCCTGCTGCAGGCAATCCAACGACCCAATCACACCAATATGCGTCAGCCAACCCTATTGGGAGATCattc > 1:148846/1‑274 (MQ=255) aGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCg > 1:39527/1‑275 (MQ=255) cATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCCCCAATATGCGTCa > 4:271401/1‑223 (MQ=255) cGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCa < 2:271405/223‑1 (MQ=255) tCAAGGCCGCAGTACCCGCAGTGCAAACAGAACAGTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGGTATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCaa < 2:305965/191‑1 (MQ=255) aaGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGa < 2:131767/275‑1 (MQ=255) ccGNNGTGCAAACAGAACATTGTTTGCTCACCCACGGTGACATGCCAACCCTCNCCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCa < 4:512617/206‑1 (MQ=255) gTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGgac < 2:253965/273‑1 (MQ=255) gTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGgac < 2:480996/273‑1 (MQ=255) gAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAAt > 2:329208/1‑158 (MQ=255) aaCATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATg < 8:286557/149‑1 (MQ=255) aaCATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCAATTTTAGTGTCAAAACCATGCCTGATg > 8:201116/1‑149 (MQ=255) aTTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCaa < 4:329204/158‑1 (MQ=255) ttGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAgg > 6:260262/1‑149 (MQ=255) ttttCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCaa < 7:11577/149‑1 (MQ=255) tcACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTTGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGCATCAGGCatggttt > 5:307085/1‑143 (MQ=255) tcACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGCATCAGGCatggttt < 6:307085/149‑7 (MQ=255) ccACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGAc < 6:68384/149‑1 (MQ=255) ccACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGAc > 8:141110/1‑149 (MQ=255) aTGCCGACCCTCACCATCGATATTTTTAGAAAAATCTAGTCGTTACAAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCAc < 6:88071/149‑1 (MQ=255) aTGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCAc < 5:149593/149‑1 (MQ=255) ccAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCaa > 8:84324/1‑149 (MQ=255) aCCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATGATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAAc > 2:106124/1‑275 (MQ=255) aCCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAatat < 7:416088/149‑1 (MQ=255) aCCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGga < 2:216622/171‑1 (MQ=255) ccTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGc > 6:76503/1‑149 (MQ=255) ccTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGc > 6:50502/1‑149 (MQ=255) ccTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGc < 7:356066/149‑1 (MQ=255) tCACCATCGATATTTTTAGAAAGATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACGAATATGCGt < 5:408882/149‑1 (MQ=255) aCCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCaa > 5:17720/1‑118 (MQ=255) aCCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCaa < 6:17720/118‑1 (MQ=255) cGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATACTTTTAGATATTGATACTCCGGACGACTTTATTACAGCGa > 2:381557/1‑236 (MQ=255) gAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGCATCAGGCat > 8:291641/1‑101 (MQ=255) gAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGCATCAGGCat < 7:291641/102‑2 (MQ=255) gAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCAATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGga < 7:201116/149‑1 (MQ=255) aaaaaTCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGgag > 6:220479/1‑149 (MQ=255) aaaaaTCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGgag > 6:300702/1‑149 (MQ=255) aaaTCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGAt > 8:243753/1‑149 (MQ=255) aTCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCa > 6:69305/1‑149 (MQ=255) gTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGACTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCg > 5:271706/1‑149 (MQ=255) ttACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGt > 6:421436/1‑149 (MQ=255) tACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCaa > 2:353280/1‑92 (MQ=255) gAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGaa > 7:440144/1‑149 (MQ=255) aaaTGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGAc < 4:353275/92‑1 (MQ=255) gcgcAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAAt < 7:24116/149‑1 (MQ=255) cAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCa < 8:280280/149‑1 (MQ=255) aaaacgaaaacgccAAAATTGCATCCCCTNNCATCCAATTTTATTGTCATAACCATGCCTCNTGCAGGCAATCCAACGACCCAATGTCACCAATATACGTCAGGCACTACTTATGGGAGATCATTATTCCGTCGAANTAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGAACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTATCATa < 3:75243/263‑1 (MQ=255) ccACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAaataat > 5:212938/1‑149 (MQ=255) ccACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATAATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTATCATAATGATa < 4:106123/274‑1 (MQ=255) cACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAAtt < 5:69305/149‑1 (MQ=255) cTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAAtttt < 5:300702/149‑1 (MQ=255) tCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTa > 6:221234/1‑149 (MQ=255) cATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGa < 5:260262/149‑1 (MQ=255) cATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGa > 7:157281/1‑149 (MQ=255) tGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGGCCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTg < 6:446521/149‑1 (MQ=255) ggCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGa < 7:243753/149‑1 (MQ=255) cATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTATCATAATGATAAGGAATCACTGAttt > 4:217444/1‑275 (MQ=255) tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACt > 7:177830/1‑149 (MQ=255) tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatt > 4:551082/1‑164 (MQ=255) tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa > 2:491974/1‑172 (MQ=255) tCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTAt > 1:75243/1‑248 (MQ=255) cGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAg < 2:551087/164‑1 (MQ=255) tCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAt > 2:534840/1‑81 (MQ=255) aTTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGga < 4:534835/81‑1 (MQ=255) aTTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttat < 5:421436/149‑1 (MQ=255) tttAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTttatta < 5:50502/149‑1 (MQ=255) tCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGaa < 8:177830/149‑1 (MQ=255) aaaaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAgg > 7:2108/1‑149 (MQ=255) aaaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAt > 5:358756/1‑65 (MQ=255) aaaCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTAt < 6:358756/65‑1 (MQ=255) aCCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGaaa < 8:2108/149‑1 (MQ=255) tGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGta < 8:157281/149‑1 (MQ=255) gCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCa > 4:518223/1‑46 (MQ=255) ccTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGtata < 6:374529/149‑1 (MQ=255) gATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCa < 2:518228/46‑1 (MQ=255) | AATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAGAAAACGTAGTTAAACGATTGCGTTCAAATATTTAATCCTTCCGGCACTCATTATCATAATGATAAGGAATCACTGATTT > NC_000913/3015322‑3015817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |