| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,318,079 | A→T | 6.6% | intergenic (‑73/+134) | rimP ← / ← metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,318,079 | 0 | A | T | 6.6% | 414.6 / 14.9 | 122 | intergenic (‑73/+134) | rimP/metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base A (55/59); new base T (5/3); total (60/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.80e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TTCAACATCCAGCACAGCACTTACCTGGTGGCTCACATCAGCACAATCATCAACATTGATGCCATCTTCACTATCAATATAGATGCGCAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGCCTGAAACGTGGCAAATTCTACTCGTTTTGGGTAAAAAATGCAAATACTGCTGGGATTTG > NC_000913/3317812‑3318349 | tCAACATCCAGCACAGCACTTACCTGGTGGCTCACATCAGCACAATCATCAACATTGATGCCATCTTCACTATCAATATAGATGCGCAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 2:345151/275‑1 (MQ=255) aaaCATCCAGCACAGCACTTACCTGGTGGCTCACATCAGCAAAATCTTCAACATGGATGCCATCTTCACTATCAATATAGATGCGCAGTTTGGATTTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 4:74353/273‑1 (MQ=255) cagcacTTACCTTGTTGCTCATATAAGCAAAATCATCAACATTGATGCCAACTACACTATCAATATAGATGCGCAGTGTGGATGGGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCGACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTg < 1:45993/275‑1 (MQ=255) aaTCATCAACATGGATTCCATCTTCACTATCAATATAGATGCGCAGTGTGGAGGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCCACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGAACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAg < 1:59941/274‑1 (MQ=255) gcgcAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc < 2:437521/275‑1 (MQ=255) gcgcAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc < 2:234518/275‑1 (MQ=255) cgcAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCg > 2:369488/1‑275 (MQ=255) cAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGaa > 2:259755/1‑275 (MQ=255) tgCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 1:129239/1‑174 (MQ=255) cGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGTCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 4:440595/1‑172 (MQ=255) cGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCAAGAAGGATTTTTTCAAATCCAACTACGAAGGCCGAAGTCTTCACAGtat > 1:150322/1‑275 (MQ=255) aCCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 3:129239/174‑1 (MQ=255) cgcgAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAAt < 2:487413/167‑1 (MQ=255) cgcgAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 2:440600/172‑1 (MQ=255) aatttCGATGCCAAACGGTTCAAACACCAGGGCCTCAACTGGCGCAGTAATCAGCTCTGTTAATTTTTGCTTTAATGTGGACAAGCCCACCCCCAGGACATAAAAAAAGGGCGTAAAGCCTAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAGCTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTGCGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAg < 2:223271/272‑1 (MQ=255) aaaTTCGTATCCAAACAGTTCAAAACCCAGGGCCTCAACTGTCGCAGTAATCATCTCTTGTAAGTTTTACTCTAATGTTGACAAGCCCACCCCCAAGACATAAAAAAAAGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGAGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAAACCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAg < 4:259751/275‑1 (MQ=255) aaTTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCtt < 2:476674/255‑1 (MQ=255) gATGCCAACCAGTTCAAAACCCAGGTACTAAACCGGCGAAGTAAACATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCAACCCCAAAAAATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGCTAATTCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGActct < 4:369483/275‑1 (MQ=255) gATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGActct < 2:189496/275‑1 (MQ=255) tGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 1:127386/1‑153 (MQ=255) ccAACCAGTTCAAAACCCAGTGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAgg < 1:117133/275‑1 (MQ=255) aaCCAGTTCAGAACNCAGGTCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 3:127386/153‑1 (MQ=255) aaCCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 8:377945/1‑149 (MQ=255) ccAGTTCACAACCCAGGGCCTCCACTGGCGCAGTAATCCTCTCTGTTATGTTTTGCTCTAATGTGGAGAAGCCCACCCCCAAGCCATAAAAAAATGGCCTAAAGCCCAGTTATTCGGTAGTCAGATAAC‑AAAAAACCCCGATAATTCgg < 8:243717/149‑1 (MQ=255) gTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGc > 5:413451/1‑149 (MQ=255) ttCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATTTATCggggtt < 6:239167/149‑3 (MQ=255) ttCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGaa > 4:273189/1‑226 (MQ=255) aaaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta > 5:249354/1‑149 (MQ=255) aaaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta > 5:252816/1‑149 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCg > 7:171616/1‑140 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCg < 8:171616/140‑1 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTtat > 7:127806/1‑149 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTtat < 6:249354/149‑1 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc < 2:273193/226‑1 (MQ=255) aaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGAAGTCAGAAAAC‑AAAAAACCCCGAAAAACCGGGGCTTTATATAACTGAACCCAATAACCGAAACTCCGGCTTGGAGCACTTTCCGGAAGGATTTTTTAAAACCCCACTCCGAAGGCGGAGTTCTTCACATAATATTTGAAAAAGGAC‑CTTAGGGAAAgggggttgag > 4:238306/1‑269 (MQ=255) aGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAAAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTAAANNNAGACTCATAGGGAAAGtagaggtcactta > 3:153598/1‑263 (MQ=255) ccTAAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTa < 1:153598/250‑1 (MQ=255) cTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAAcc > 7:17928/1‑149 (MQ=255) atgaaactatcctGTTTATTTTTGCCCTAATTTGGACCAGCCCCACCCCAAAACAAAAAAAAAAGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACcga < 2:238310/261‑1 (MQ=255) tGTTAATTTTTGCTCTAATGTGGACAAGCTCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCGTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCCCTTTCCAGAAGGATTTTTTCAAATCCGCCATCGAAGGCCGAAGTCTTAACAGTACATTTACAAAAGGACTCTAAGAGCAAGTGGTTGCGGGGGCCGGATTTACACCGAGAATCTTCTGGTTa > 4:422006/1‑274 (MQ=255) tGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 2:56131/1‑104 (MQ=255) ttAATTTTTGCACTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAGCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAg < 1:58037/216‑1 (MQ=255) aaTTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCgggg < 4:56130/104‑1 (MQ=255) aTTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACt < 6:413451/149‑1 (MQ=255) ctctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 4:223604/1‑92 (MQ=255) ctctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCcgacga > 2:392156/1‑274 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 7:53073/1‑149 (MQ=255) tAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGt > 7:58404/1‑129 (MQ=255) tAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGt < 8:58404/129‑1 (MQ=255) tAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAgg > 6:10160/1‑149 (MQ=255) aTGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta > 8:129053/1‑96 (MQ=255) aTGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta < 7:129053/96‑1 (MQ=255) gACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAAc > 4:382249/1‑116 (MQ=255) gACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGAtttttt > 6:71209/1‑149 (MQ=255) aGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCg < 2:382254/116‑1 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATc > 1:25603/1‑77 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAAc > 4:433057/1‑92 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATc > 4:532283/1‑150 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTcc > 2:295418/1‑275 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCAGGTAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAATTCCAACTACGAAGGCAGAAGTCGTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGGGGGGGCCGGATTTAAACCGACGAGTTTCGGGTTATGGTCCCGACGAGCCTCCAGGCCGCTcc > 4:97624/1‑275 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAG‑CCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTAAATTTGAAAAAGGACTCAAAGGGAAAGTAGTTGAGGGGGCCGGATTTGAACGGACGATCTTCGGGTTATGAGCCGAGAGAGGTACCAGgctcgcccc > 4:135442/1‑269 (MQ=255) cACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 5:22166/1‑132 (MQ=255) cACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa < 6:22166/132‑1 (MQ=255) aCCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTg < 2:381531/90‑1 (MQ=255) aCCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGaa < 2:433062/92‑1 (MQ=255) aCCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCAc < 2:532288/150‑1 (MQ=255) cccccAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTc > 3:125802/1‑165 (MQ=255) cccAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTa < 8:127806/149‑1 (MQ=255) cAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGGACTTTCCAGAAGGATTTTTTCAAATCCCACTACg > 5:389713/1‑149 (MQ=255) cAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTca < 1:125802/165‑1 (MQ=255) aGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGaa < 5:414511/149‑1 (MQ=255) caaaaaaaGGTCAAAAAGCCCAGTTATATNNNAGTCAAAAAAC‑AAAAAACCCCCATAAATCGGGGCTTTATATAACTGACCCCCATAACCGCAACTGCGGTCGGGAGCACTTTCCAGAAGGATTTTTTCAAGTCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGAGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGCCTGAAAc < 3:150322/274‑1 (MQ=38) aaaaaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGaa < 6:252816/149‑1 (MQ=255) aaaaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa < 8:344210/116‑1 (MQ=255) aaaaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 7:344210/1‑116 (MQ=255) gggCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTc < 7:377945/149‑1 (MQ=255) ggCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATACCAGCAACTGCGGTCAGGAGCACTTTCCAGACGGATTTTTTCAACTCACACTACGAAGGCCGAAGTCTGCACCGTATATTTGAAACAGGACTCCAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGACCGAAGAGCTCCCAGGCTGCACCACACCGCGCCGGAAACGTGGaaagt > 4:366831/1‑273 (MQ=255) ccTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGCAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGAAGATCTTCGGGTTATGATCCCGAAGAGTTACCAGGACGCTCCACCCCGCGGCTGAAAAGTGGCAAATTc > 1:101982/1‑275 (MQ=255) cTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAg > 6:348833/1‑149 (MQ=255) gCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTatat < 6:389713/149‑1 (MQ=255) gTTATTCTGTAGTCAGATAACAAAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTNTTCAAATCCCACTACGAAGGCCGNNGTCTTCACNGTATATTTGaa > 3:35851/1‑150 (MQ=255) aTTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGaaaaa < 8:53073/149‑1 (MQ=255) ttCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc < 3:58330/122‑1 (MQ=255) tCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTcac < 8:270986/125‑1 (MQ=255) cAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAg < 6:369757/149‑1 (MQ=255) aGATAAC‑AAAAAACCTCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAgg > 8:454886/1‑149 (MQ=255) aTAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGCCTGAAACGTGGCAAATTCTACTCGTTTTGGGTAAAAAATGCaaa < 2:422011/274‑1 (MQ=255) tAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaa > 8:165315/1‑149 (MQ=255) gttatataaagCCCCGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGa > 7:307933/8‑149 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGTAGCACTTTCCAGAAGGATTTTTTCAAATCCCATTACGAAGGCCGAAGTCTTc < 8:403650/117‑1 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTc > 7:403650/1‑117 (MQ=255) aaaaaaCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTg < 8:377796/149‑1 (MQ=255) aaaaaCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTgg > 6:261670/1‑149 (MQ=255) aaagCCCCGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGt > 5:161492/1‑149 (MQ=255) agccccGATTTATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGTAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTg > 7:326511/3‑149 (MQ=255) gccccGATTTATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGc > 7:362286/2‑149 (MQ=255) aCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGc < 5:10160/149‑1 (MQ=255) cccGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGaa > 7:382049/1‑101 (MQ=255) cGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCgggg < 5:348833/149‑1 (MQ=255) cGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGCCTGAAACGTGGCAAATTCTACTCGTTTTGGGTAAAAAATGCAAATACTGCTGGGATTTg < 2:135443/275‑1 (MQ=255) | TTCAACATCCAGCACAGCACTTACCTGGTGGCTCACATCAGCACAATCATCAACATTGATGCCATCTTCACTATCAATATAGATGCGCAGTGTGGATGTGCGACCGCGAATAAATTCGATGCCAACCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCCGGATTTGAACCGACGATCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGCCTGAAACGTGGCAAATTCTACTCGTTTTGGGTAAAAAATGCAAATACTGCTGGGATTTG > NC_000913/3317812‑3318349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |