| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,477,878 | T→A | 10.6% | intergenic (+20/+29) | slyX → / ← slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,477,878 | 0 | T | A | 10.6% | 222.2 / 15.5 | 75 | intergenic (+20/+29) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| Reads supporting (aligned to +/- strand): ref base T (37/30); new base A (5/3); total (42/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.19e-01 | |||||||||||
AATCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCA > NC_000913/3477605‑3478145 | aaTCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGACACCGCCACATTATTGAAGCGTAAAAAAAGCGGGGAt > 2:231262/1‑274 (MQ=255) tCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCAACGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGA‑TTTTTTGtac > 4:53939/1‑273 (MQ=255) aaGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACttttt < 2:53940/274‑1 (MQ=255) ggTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAAAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTa < 2:434461/275‑1 (MQ=255) gTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGGTTCCCCGC‑CTTTTTGTCACTTTTTCGGTAt > 1:14689/1‑275 (MQ=255) gTGAATCATGCAGGATTTATCATTGGAACCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGATCGTCACGGTGACCGCTCATGAAATGGAGATGGAGAAACTGCGCGATCTTCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAACAAAAGCGGGTATTCCCCGC‑TTTTTTGTCACTTTTTCGGTAt > 2:360702/1‑275 (MQ=255) cAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTCTTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGGATTATTGgcaa > 1:135862/1‑274 (MQ=255) gACTGGCTTTTCAGGAAATACCCATGGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGTCGAAACTGCGCAATCCTCTGCGTCTGCTGACCGAGAAGTTAAGAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCAcc < 2:431010/275‑1 (MQ=255) ttCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCAt < 2:303170/274‑1 (MQ=255) aaaTCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCCCTTTTTCGGCATTAATTGCCACCGCAACCCCCGTTGCCTTTA‑CCGCCACCGCATCCTTCGCCCCCCGTTCCATGACCGt > 4:53156/1‑274 (MQ=255) gaaCTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCAACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTTTTAATGACCGAGATCGTGGCCATGa > 1:8720/1‑274 (MQ=255) aaCGGAACGTCACGGTGACCGCTCATGAAATGGGGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACCCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGAcc < 2:53157/275‑1 (MQ=255) cGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCAGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGCACATCGCGACGCAGGCTGAAGAAACGCCACCGCCAACTTATTGAGGAGTAAAAAACGCGGGGATTACCCGC‑TTTTTTGTATCTCTTTCGGTATTAGTGGCCACTGCCACCGTCGTTACCTTTA‑CCCCCCAATCCGCCTTCGCCACCGTGTTCAGGCCCGTAATCTTGGcccttacagtccccg > 4:175942/1‑262 (MQ=255) aCCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTcc < 6:137241/149‑1 (MQ=255) aCCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCAC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCACACGCCGTTGCCTTTA‑ACGCCCCAGCAGCCTTCCACACCGTGTTCATTACCGTGATCGTGGCGATGCCCGCCGAAACAACagtcat > 4:212566/1‑273 (MQ=255) cGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTcccc < 5:273187/149‑1 (MQ=255) cGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTcccc < 5:116476/149‑1 (MQ=255) cTCATGAAATGGGGATGGCGAAACTGCCGGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggt < 2:212569/274‑1 (MQ=255) aTGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑ttt > 6:151500/1‑149 (MQ=255) aTGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGC‑ttt < 6:350401/149‑1 (MQ=255) tGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttt > 6:355533/1‑149 (MQ=255) aaTGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAACCGCCACCGCCACATTATTGAGGAGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATc < 2:136460/274‑1 (MQ=255) tGGAGATGGCGAAACTGCGCGACCATCTGCGTCTGCTGACCAAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTGTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCgt < 2:175944/274‑1 (MQ=255) ggCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGa > 2:166015/1‑264 (MQ=255) ggCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCgtgt > 2:127306/1‑212 (MQ=255) aaCTGAGCGACAATCTGAGTATGCTGACCGAGAAGTTAAAAGCCAGCGAGCCGTCGAACATCGCGTCGCAGGCGGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTg < 2:263613/275‑1 (MQ=255) aCTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTAt < 5:175476/149‑1 (MQ=255) cgcgATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTc > 2:504366/1‑192 (MQ=255) cgcgATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGGGGGCGTGATCGTGGTGGTGATCGTgggcg > 2:501319/1‑274 (MQ=255) cTGCGTCTGCTGACAGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACg < 1:139010/274‑1 (MQ=255) cTGCGTCTCCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGt < 2:48325/275‑1 (MQ=255) tgctgACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgcc > 6:359475/1‑149 (MQ=255) tgctgACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgcc > 8:433296/1‑149 (MQ=255) cgtgACCGAGAAGTAAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCTCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATg < 2:195215/272‑1 (MQ=255) gACCGAGAATTTAAAAGCCAGCCAGCCGTCGACCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGcc < 2:252084/275‑1 (MQ=255) cGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAtt > 8:72021/1‑94 (MQ=255) cGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAtt < 7:72021/94‑1 (MQ=255) gagaAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTa > 7:150302/1‑123 (MQ=255) gagaAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTa < 8:150302/123‑1 (MQ=255) gTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCg > 8:322587/1‑149 (MQ=255) tAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGttcttcttc > 2:325302/1‑275 (MQ=255) agccagccagccGTCGAACATCGCATCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCAcag > 8:335512/1‑149 (MQ=255) gccagccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑tttttt > 2:343913/1‑89 (MQ=255) agccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGt < 7:191869/124‑1 (MQ=255) agccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGt > 8:191869/1‑124 (MQ=255) gccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCa < 4:343909/89‑1 (MQ=255) ccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑ttttt < 6:90883/83‑1 (MQ=255) ccGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑ttttt > 5:90883/1‑83 (MQ=255) cATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCAGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCgtgt < 8:312288/149‑1 (MQ=255) cgTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCCTGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTc > 2:230913/1‑275 (MQ=255) gCTGAAGAAACGCCACCGCCCCATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCAAACGTGTTCNTGACCGTTATCGTGGCCATGCCCGCCGCACCAACCCTCGTGTTCGGGCACCTGGTTGTGATCGTGCCCCACCTGNACGTGACCCTGAGCCAGTTCCTCCTCTCTCNNCTCGCCGATCACCACAACtatcaatctga > 3:67910/1‑265 (MQ=255) tGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCg > 7:344003/1‑149 (MQ=255) aagaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTg < 7:25997/149‑1 (MQ=255) agaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTgg < 5:359475/149‑1 (MQ=255) agaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTgg < 5:151500/149‑1 (MQ=255) gaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGc > 8:238568/1‑149 (MQ=255) tttggggctgaaaaaaaGGAGGGATGGCCGGC‑TTTTTTGTCACGTTTTCGGTATGAGTGGAAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCAt < 2:59483/265‑1 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGt > 4:48459/1‑114 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGtt > 2:132011/1‑274 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTa > 1:139349/1‑275 (MQ=255) tAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGGTCGTGGTGGTGATCGTGCGCGCCGTGACGGTGACCATGAGCCAGGTTTTCTTCATTCGCTTCGCGAACCGCCACACCTTCCACGTTGAATTTCCGTTTCTGACCCCGCCGCATTTGGTTAcc > 4:307631/1‑275 (MQ=255) tAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTAcc > 2:361947/1‑275 (MQ=255) tAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGGGACCATGAGCCCGTTCTTCTTCAGTCGCTTCGCGAAGCGCACCAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCCGCATGTGGTTAcc > 2:329631/1‑275 (MQ=255) tAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAAACGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTGGTGATCGTGGTGGTCCACGTGCGCGCCGGGAACGTGGCCAGGATCCGGTTCTTCTTCAGTCGCTTCGCGAATCGCCACACCATCAACGTTGAATTTCAGGTTCTAGCCGGCTAGcctagtgttccc > 4:76762/1‑264 (MQ=255) aaaaagGCGGTGTTTCCCCCT‑GTTTGTTGCAGTTTGTGGGTATGAGCGTCAACCGTAGCCCTCGTTGTCTCTG‑CCGCCACGCGAGCGTGCGCCACCGTGTTCATGACCGTGAGCGTGGCCATGTCCGCCGAAGCACCCGTGGTGTTCGTGATCGTGGTGGTGATCGTGGGCGCCGGGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCAt < 4:286858/275‑1 (MQ=255) aaaaaaGCTGGGATTCCCCGT‑TTGTTGTTCCCTTTTTCGTTTTTGGTGCTACCCCGAACACCCGTTGCATTTC‑CCACCACGGCAGCCTCCGCCACGTTGGTCATGACCGTGATAGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTAATCGTGGTGGTGAGCGTGCGCGCCGTGAACGTGACCATGTGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCGGGTTCTGACCGGCCAGCATGTGGTTACCAt < 4:325298/275‑1 (MQ=255) aaaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATc < 2:48459/114‑1 (MQ=255) aaaaaaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcgt > 5:411464/1‑149 (MQ=255) aaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcgt > 5:296609/1‑149 (MQ=255) aaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcgt > 8:433653/1‑149 (MQ=255) aaaaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcat > 6:38245/1‑147 (MQ=255) aaaaaGCGGGGAATCCCCGCTTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCgtcgtggtcgt > 5:84922/1‑149 (MQ=255) aaaaGCGGGGAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGa > 7:2996/1‑149 (MQ=255) aaGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATc < 8:138048/149‑1 (MQ=255) aGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCg > 5:455305/1‑149 (MQ=255) gCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTTACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCCAAGCGCCACAACTTCAACGTTTAATTTCAGGTTCTGACCGGCCAGCATTTCGTTACCATCACCCa > 2:159318/1‑275 (MQ=255) gggAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCATGATCgtggt < 5:38245/149‑1 (MQ=255) ggAATCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCgtggtg < 6:296609/149‑1 (MQ=255) | AATCCGCGGCGACCATTCGACAAAAGAGGTGAATCATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGC‑TTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTA‑CCGCCACAGCAGCCTTCGCCACCGTGTTCATGACCGTGATCGTGGCCATGACCGCCGCAGCAACCGTCGTGGTCGTGATCGTGGTGGTGATCGTGCGCGCCGTGAACGTGACCATGAGCCAGTTCTTCTTCAGTCGCTTCGCGAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCA > NC_000913/3477605‑3478145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |