| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,126,129 | A→T | 7.2% | S228T (TCC→ACC) | priA ← | Primosome factor n' (replication factor Y) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,126,129 | 0 | A | T | 7.2% | 272.1 / 7.6 | 79 | S228T (TCC→ACC) | priA | Primosome factor n' (replication factor Y) |
| Reads supporting (aligned to +/- strand): ref base A (40/33); new base T (3/3); total (43/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
ATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGCCAGATTTTGCCTTGCCGTAACGCCGCCAGCGCCTGTTG > NC_000913/4125855‑4126396 | aTGCCAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGa < 2:139518/275‑1 (MQ=255)aTGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGa < 2:292692/275‑1 (MQ=255) ccGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGATGCCGCTCACAATCGCGGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAAcgcc < 2:144838/275‑1 (MQ=255) gcgcGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCCGGCAGAAAAAGTa > 2:237004/1‑275 (MQ=255) cgcgGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCAAGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTAACGAAAACGGGCGATAGTTTGCGGTTGCAGGCCGATTTCCGGCACAATCCCCAGCGACTGTTTGCCCTGAGCGAGCATGGTTTCCAGTACGACGAGATGAACCCCAGTTTTACCGGTACCGGTCAACCCCGTCGGCCGCCCGGCAAGAAAATTAt > 4:384960/1‑275 (MQ=255) gCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCTGAACATCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGTTAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGcc < 2:360106/274‑1 (MQ=255) gCGGGTGCCGATCACAATCGCCGCCTCACCAGTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGTGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGcc < 2:231371/274‑1 (MQ=255) gccgccTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCaa < 2:242381/274‑1 (MQ=255) ccATTTTGCGCTTTCAGCCAAGCCGAAAGACGCTCGCTGTCGTCCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGc < 1:54216/275‑1 (MQ=255) tttCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAACCGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACCGCGGTGGCCTGTTCGGTa > 2:106758/1‑274 (MQ=255) gCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTACCGCCCGCCAGCAGCCAGGCAAAAAAAGTATCCGCCGCCCTATGCATTGACGCAACCGCGGTGGACTGTTCGGTATTTCACCTCAACCCCTCCCCACAACCggaccagttc > 4:358819/1‑266 (MQ=255) gAATGCAGAACTTCCACGGGGGCATTAAACCGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATa < 2:358824/266‑1 (MQ=255) tGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGa > 7:153891/1‑149 (MQ=255) ttCCACGGGTGCAGTAAAACGTTCACGAAAACGGGCGATAGTTGGGGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGGTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCGCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACAGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCAGAGTTCGTTCGCCAGTCGCTa < 2:94377/274‑1 (MQ=255) ttCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTTTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCt < 2:384965/273‑1 (MQ=255) aCGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGTTCCGGTaaaacg < 7:449837/149‑5 (MQ=255) aCGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAAcgcc > 5:355870/1‑149 (MQ=255) cGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAAcgccc < 7:469446/149‑1 (MQ=255) gggggCATTAAAACGTTCACGAAAACGGGCGATAGATTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGTTCCGGTaaaacgga < 7:324934/149‑7 (MQ=255) gggCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAAcgcccgcc > 8:264656/1‑149 (MQ=255) aTTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGtt > 2:10774/1‑274 (MQ=255) aaaCGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCa > 6:160639/1‑149 (MQ=255) tCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGa > 7:287012/1‑149 (MQ=255) cACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGaa > 8:466072/1‑149 (MQ=255) cACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTaaa > 2:285651/1‑275 (MQ=255) cACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACCNCCGCCAGCAGCCAGGCCGAAAAAGTATCTGCAGCGCTATGAATTgcg > 3:52485/1‑176 (MQ=255) aCGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCAAAGTTCTTTCCCCATTCCCTAAACTCTGGTTTTTCACTTGTCAAAt > 4:402123/1‑275 (MQ=255) gAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGaaaaa < 7:361641/149‑1 (MQ=255) gAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGaaaaa < 5:14090/149‑1 (MQ=255) aaaaCGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCaa < 1:52485/176‑1 (MQ=255) aaCGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTa < 5:124586/149‑1 (MQ=255) cGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATc < 8:69557/149‑1 (MQ=255) gCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGc < 8:386203/149‑1 (MQ=255) gTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTAt > 7:136037/1‑139 (MQ=255) gTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTAt < 8:136037/139‑1 (MQ=255) gTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCt > 5:306228/1‑149 (MQ=255) tttGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTa > 5:183114/1‑149 (MQ=255) ttGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTAt > 6:265078/1‑149 (MQ=255) tGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGc > 2:315303/1‑274 (MQ=255) gtCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTgc < 6:183114/149‑1 (MQ=255) tCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTgcg < 7:466072/149‑1 (MQ=255) gCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTAt > 6:48311/1‑125 (MQ=255) gCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTAt < 5:48311/125‑1 (MQ=255) aTTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCCCGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTCCGCCAACGGCGGCGGCCTGTTCGGTATTCCATCGCAACCGCTCACCCGAACCGGCATAGTTCGTTCGCCCGTCCCTAAACTCTGGTGTTTCCCCTGCTCAGTCACCCAGCGCTTTTTTGCTAACCGCATTCAAcg > 4:321596/1‑274 (MQ=255) aTTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAAcggcgg > 2:521229/1‑151 (MQ=255) aTTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGTCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGATAAATCACACAGACCTTTTTTTCCTAGCCTCTGCAAccc > 2:202112/1‑273 (MQ=255) tttCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAAcggcg > 6:181429/1‑149 (MQ=255) tCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGt < 6:385308/149‑1 (MQ=255) ccGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGc < 4:521224/151‑1 (MQ=255) tCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCg < 5:265078/149‑1 (MQ=255) cACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCgcgc < 6:133918/116‑1 (MQ=255) cACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCgcgc > 5:133918/1‑116 (MQ=255) ccAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTa > 6:280326/1‑149 (MQ=255) cAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTAt > 6:338461/1‑149 (MQ=255) cTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATc < 8:287012/149‑1 (MQ=255) gTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAACAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGCGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGCTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCCCTTGCTAACTCACCCAGACCTTTTTGGCGTATCGCTCGCAACGCGGCATCATTAAATTCGAGCGTGGc > 4:433383/1‑274 (MQ=255) ccTGAGCGACCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGc > 5:408933/1‑149 (MQ=255) gcgagcACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAg > 7:58756/1‑72 (MQ=255) gcgagcACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAg < 8:58756/72‑1 (MQ=255) gTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACgg > 6:376693/1‑149 (MQ=255) gTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACgg > 6:178949/1‑149 (MQ=255) cAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCATGCAGAAAAAGTATCTGCCGAGATATGAATTGCGCAAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGCCGCTAAACTCCGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGCCAGATTttgcct < 1:140478/274‑1 (MQ=255) cAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAgt < 5:160639/149‑1 (MQ=255) gTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAgttc > 7:335393/1‑149 (MQ=255) aCGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAgttcgt < 5:338461/149‑1 (MQ=255) cGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAgttcgtt > 6:14914/1‑149 (MQ=255) tGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCATCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGGTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCGGGTGTTTCACTTGCCAAATAACACAGACCCTTTTTGCGGAGGGCCAGCCAAGCGGCATCATTAAATCCGAGCGTGGGGAACCGCGTGCGCCCGATTTTGCCTTGCCggacc > 4:372606/1‑271 (MQ=255) tGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAATCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGCCAGAGTTGGCCTTGCCg > 1:117589/1‑271 (MQ=255) tGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCTCGCCCGATTTTGCCTTGCCGTAAc > 2:193284/1‑275 (MQ=255) aTAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGt > 6:157507/1‑149 (MQ=255) aaCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGc < 5:178949/149‑1 (MQ=255) aaCCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGc < 6:355870/149‑1 (MQ=255) cTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTaa > 8:250133/1‑149 (MQ=255) cTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTaa > 6:31146/1‑149 (MQ=255) gttACCGGTTCCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTa > 7:287763/2‑91 (MQ=255) gttACCGGTTCCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTa < 8:287763/90‑1 (MQ=255) gttACCGGTTCCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTg > 7:328998/2‑149 (MQ=255) tACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGgt < 5:376693/149‑1 (MQ=255) tACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGCCGCCAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTCCGTAGCCCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCCAACTGGTCGCGCCAGCATTTGCCTTGCCGTAACGCCCCCAACCCCcgtt > 4:105222/1‑273 (MQ=255) aCCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGCCAGATTTTGCCTTGCCGTAACGCCGCCAGCGCCtgttg < 2:402128/273‑1 (MQ=255) ggAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGttt < 7:264656/149‑1 (MQ=255) gAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCCACCGCt > 4:481150/1‑100 (MQ=255) | ATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCTCGCTGTCGTTCAGGCCGGAATGCAGAACTTCCACGGGGGCATTAAAACGTTCACGAAAACGGGCGATAGTTTGCGGTGTCAGGCCGATTTCCGGCACCATCACCAGCGCCTGTTTGCCCTGAGCGAGCACGTTTTCCAGTACGCTGAGATAAACCTCCGTTTTACCGGAACCGGTAACGCCCGCCAGCAGCCAGGCAGAAAAAGTATCTGCCGCGCTATGAATTGCGCCAACGGCGGTGGCCTGTTCGGTATTCAATCGCAACCGCTCACCAGAAACGGCATAGTTCGTTCGCCAGTCGCTAAACTCTGGTGTTTCACTTGCTAAATCACACAGACCTTTTTTGCGTAGCGCCTGCAACGCGGCATCATTAAATTCGAGCGTGGCGACCTGGTCGCGCCAGATTTTGCCTTGCCGTAACGCCGCCAGCGCCTGTTG > NC_000913/4125855‑4126396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |