| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 781,326 | A→T | 5.1% | intergenic (+104/‑43) | lysY → / → lysZ | tRNA‑Lys/tRNA‑Lys |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 781,326 | 0 | A | T | 5.1% | 353.4 / 7.3 | 98 | intergenic (+104/‑43) | lysY/lysZ | tRNA‑Lys/tRNA‑Lys |
| Reads supporting (aligned to +/- strand): ref base A (47/46); new base T (2/3); total (49/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.63e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
CGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG > NC_000913/781059‑781576 | cgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGACCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTg > 2:54331/1‑275 (MQ=255) cggTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTagag < 1:37165/275‑1 (MQ=255) cGGGTCGTTAGCTCAGTTGGTTTAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCa < 2:22966/274‑1 (MQ=255) cGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAGTGGTCGCAGGTGCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCa < 1:109739/274‑1 (MQ=255) aGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc > 2:164458/1‑199 (MQ=255) cAGTGGGTAGAGCAGTTGACGTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTGAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGt < 4:164456/199‑1 (MQ=255) ttGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc > 2:27630/1‑192 (MQ=255) tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTa < 2:244592/164‑1 (MQ=255) gagCAGTTGACTTTGAATCAATTGGTCGCAGGTTCGAATCCTGCACGTCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCTCGACccac < 2:454585/275‑1 (MQ=255) gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGATGTTAAGCGTGAGGAATAACGTTGCGCCAGCACCGGCCCGAAGGGGAAGCGAAGCGAGGCATCCTGCACGCACCACCAATCTTAAAGATTAGCCCCTCGTAAAAATCTTTCAGCTAACCCCCGTATGGACCCTTAGTAGAGTTGGTAGAG‑AGTTGTACTTTAAAT‑AACTTGTTGAAGGGTCGAAACCATGAACGACCCACCCAttaca > 4:351086/1‑272 (MQ=12) cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGGTTTGACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc < 1:90532/202‑1 (MQ=255) ttttAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTaa > 7:381889/1‑149 (MQ=255) tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTaaa < 5:168385/149‑1 (MQ=255) aaatgagaaTGGGTGGGAGGTGCGATGNCNGCACGACCCACCATTGTTAACAACAAACACAGATGGTAAGCGTGANAGATAACGTTGCGCAAGCAAGGGCCCGTAGTGCGAGCGAAGCGAGTCATCCTGCACTACCCACCAATCTNAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAgg < 3:45523/267‑1 (MQ=37) tCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTg < 6:134392/149‑1 (MQ=255) gaaTTGGTCGAAGGGTGGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGGGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTa < 2:426028/273‑1 (MQ=255) aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTTAAGATTggt < 8:382832/149‑2 (MQ=255) gTCGCAGGTTCGAATCCTGCACGACTCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACTCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTCTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACTCACCAATTTAAAGGTGGTTACTGGTag > 2:287145/1‑275 (MQ=255) gCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTa > 6:284818/1‑149 (MQ=255) gTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTaaaaa > 8:345801/1‑149 (MQ=255) cGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc > 2:422490/1‑152 (MQ=255) cGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTa > 1:45523/1‑248 (MQ=255) gAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt < 8:174126/149‑1 (MQ=255) gAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCtt > 8:112662/1‑149 (MQ=255) tCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCa < 7:108781/149‑1 (MQ=255) tCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGt < 4:422485/152‑1 (MQ=255) ccTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAg < 7:260427/149‑1 (MQ=255) cTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAgg < 6:167739/149‑1 (MQ=255) cACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTaa < 7:233039/149‑1 (MQ=255) agaacgaccaGTTTTAACATCAAACTCCGATGTTAAGCGTGAAGGTGAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGtt < 2:269750/268‑1 (MQ=255) ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTAt > 7:404045/1‑149 (MQ=255) ttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGTTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCTGGTTCGAATCC‑TGCACGCCCCACAAATTCAAAGGTGGTTACGGGTAGAGAACGTGCAGGAAAACGTTGCGTTAGCAACgcc > 4:71430/1‑273 (MQ=255) cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg > 8:414505/1‑149 (MQ=255) aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt > 7:46466/1‑138 (MQ=255) aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTAt < 8:46466/138‑1 (MQ=255) aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc < 8:381889/149‑1 (MQ=255) tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCt > 6:356668/1‑149 (MQ=255) tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCt > 5:176439/1‑149 (MQ=255) aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa < 7:414505/149‑1 (MQ=255) aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg > 4:441779/1‑275 (MQ=255) aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAggg > 2:352602/1‑275 (MQ=255) aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt > 8:73424/1‑149 (MQ=255) tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt > 7:110290/1‑139 (MQ=255) tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt < 8:110290/139‑1 (MQ=255) tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg > 8:315196/1‑149 (MQ=255) gATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc > 7:339808/1‑113 (MQ=255) gATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc < 8:339808/113‑1 (MQ=255) gATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa > 5:439342/1‑149 (MQ=255) gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt < 5:356668/149‑1 (MQ=255) tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTc > 2:531288/1‑102 (MQ=255) tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑Ac > 6:318110/1‑149 (MQ=255) ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGt < 4:531283/102‑1 (MQ=255) aTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGGGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTaa < 7:121025/149‑1 (MQ=255) aTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTaa > 5:216845/1‑149 (MQ=255) aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAgg > 2:360032/1‑194 (MQ=255) aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACg < 2:344028/275‑1 (MQ=255) ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAAtt < 8:332301/149‑1 (MQ=255) gcgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTgg < 5:284818/149‑1 (MQ=255) cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGACGTCGAGTCATCCTGCACGACccac > 2:267446/1‑275 (MQ=255) gccaCGTCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACGTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGGATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATc < 2:351091/271‑1 (MQ=255) accgCCCGTAGTGCTAGCGACGCGCGTCATCCTGAACGACCCACCAATCTTAAAGAGGGGCCCCGAGGAAAAATCGTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGa < 1:141188/272‑1 (MQ=25) cGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTc < 5:318110/149‑1 (MQ=255) cGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAt < 2:441784/274‑1 (MQ=255) tAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑t < 8:404045/149‑1 (MQ=255) tAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTAGTCCTGCACGCCCCACCATCCTGAATGATTaa > 2:498242/1‑275 (MQ=255) gcgagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCAc > 6:160604/1‑149 (MQ=255) cgagcgaAGCGAGTCATCCTGCACGACTCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCGTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTAGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATGTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAgg < 2:194051/272‑1 (MQ=255) gagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGa > 5:218811/1‑149 (MQ=255) gagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGa > 7:146006/1‑149 (MQ=255) gcgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGAcc > 7:410673/1‑149 (MQ=255) gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACcca > 7:175901/1‑149 (MQ=255) agcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACccacc > 6:375234/1‑149 (MQ=255) gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAAt > 8:396407/1‑114 (MQ=255) gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAAt < 7:396407/114‑1 (MQ=255) tCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTa > 8:450321/1‑149 (MQ=255) aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTaaa > 8:441028/1‑149 (MQ=255) aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAg < 2:71431/274‑1 (MQ=255) tCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAg < 7:345801/149‑1 (MQ=255) ccTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGCCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCTTTAGCAACGGCCCGAAGGGCGAGAc > 2:165085/1‑210 (MQ=255) gCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAggtgg < 5:375234/149‑1 (MQ=255) gCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAggtgg < 7:315196/149‑1 (MQ=255) gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACtttt < 8:357776/93‑1 (MQ=255) gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACtttt > 7:357776/1‑93 (MQ=255) cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGAc > 1:114553/1‑125 (MQ=255) cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGt > 2:109492/1‑151 (MQ=255) gccaATCTTTAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt > 6:3690/2‑68 (MQ=255) gccaATCTTTAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt < 5:3690/67‑1 (MQ=255) gccaATCTTTAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTc < 6:290621/99‑1 (MQ=255) gccaATCTTTAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTc > 5:290621/2‑100 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTaaa > 5:241961/1‑135 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTaaa < 6:241961/135‑1 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTa < 7:73424/149‑1 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTa > 6:473671/1‑149 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTa > 5:267009/1‑149 (MQ=255) accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTa < 6:176439/149‑1 (MQ=255) ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACccac < 3:114553/125‑1 (MQ=255) ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag < 4:109491/151‑1 (MQ=255) ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAgg > 4:292105/1‑130 (MQ=255) aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTaaa > 6:49807/1‑126 (MQ=255) aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTaaa < 5:49807/126‑1 (MQ=255) | CGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTG‑ACTTTTAATCAATTGGTCGCAGGTTCGAATCC‑TGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG > NC_000913/781059‑781576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |