| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,537,165 | G→A | 6.1% | L49L (CTG→TTG) | narW ← | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,537,165 | 0 | G | A | 6.1% | 210.1 / 2.3 | 65 | L49L (CTG→TTG) | narW | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) |
| Reads supporting (aligned to +/- strand): ref base G (32/29); new base A (2/2); total (34/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
AGCTGCAGGCCGACCTTTTCATACTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCATTA > NC_000913/1537017‑1537311 | aGCTGCAGGCCGACCTTTTCATACTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATTcag > 2:142012/1‑149 (MQ=255)aGCTGCAGGCCGACCTTTTCATACTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCcag > 2:385643/1‑149 (MQ=255) gCAGGCCGACCTTTTCATACTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCagcagc > 3:90754/1‑149 (MQ=255) cTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTtgt < 4:90754/149‑1 (MQ=255) tCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTtgtg > 2:305315/1‑149 (MQ=255) tCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTtgtg > 4:217243/1‑149 (MQ=255) ccGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTgg < 4:273912/149‑1 (MQ=255) ccGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTgg < 3:217243/149‑1 (MQ=255) ccGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTgg < 3:306536/149‑1 (MQ=255) gcagGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGaaa < 1:208971/149‑1 (MQ=255) gcagGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGaaa > 1:459482/1‑149 (MQ=255) gcagGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGaaa < 4:373834/149‑1 (MQ=255) agGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTgg > 1:217601/1‑141 (MQ=255) agGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTgg < 2:217601/141‑1 (MQ=255) caccaTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTaa < 2:306459/149‑1 (MQ=255) caccaTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGCTTATCCAGCAGCGGCGCGTTAAGCAGTTTGTGGTTAAAATCCGTaa < 4:214953/149‑1 (MQ=255) caTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTaa < 3:45028/146‑1 (MQ=255) caTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTaa > 4:45028/1‑146 (MQ=255) caTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCa > 3:436310/1‑149 (MQ=255) caTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCa > 4:152304/1‑149 (MQ=255) caTTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAACAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCa > 2:87800/1‑149 (MQ=255) ttGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATc > 2:433787/1‑149 (MQ=255) ttGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATc > 1:115261/1‑149 (MQ=255) tGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGgcgc > 4:451998/1‑149 (MQ=255) gcgATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTcgc > 2:323342/1‑149 (MQ=255) gggACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATc < 4:322597/149‑1 (MQ=255) aCTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAAc < 1:433787/149‑1 (MQ=255) aCTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAACCCGTAAGCATCGGCGCGTCGCGGCGGATCAAc < 3:372672/149‑1 (MQ=255) tCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGc > 3:83141/1‑149 (MQ=255) cATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAgc < 2:115261/149‑1 (MQ=255) cATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAgc < 4:321651/149‑1 (MQ=255) cATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAACAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAgc > 4:221810/1‑149 (MQ=255) aTGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAAc < 2:126153/142‑1 (MQ=255) aTGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAAc > 1:126153/1‑142 (MQ=255) aTGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAgcg > 1:78926/1‑149 (MQ=255) aTGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGtcct > 1:344500/1‑149 (MQ=255) ttCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTa < 2:464461/106‑1 (MQ=255) ttCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTa > 1:464461/1‑106 (MQ=255) tCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCtt > 2:52071/1‑149 (MQ=255) aaCAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCa > 1:304983/1‑149 (MQ=255) tgCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAACAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTcc < 3:221810/149‑1 (MQ=255) cccGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCAGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGAt > 4:414511/1‑149 (MQ=255) ccGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATa > 2:363629/1‑149 (MQ=255) tCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCAt < 2:78926/149‑1 (MQ=255) aaaCACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCa > 1:471220/1‑149 (MQ=255) aaaCACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCa > 2:379775/1‑149 (MQ=255) acacTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAAc < 2:471220/149‑1 (MQ=255) acacTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAAc > 1:284166/1‑149 (MQ=255) cTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAgg > 4:413732/1‑149 (MQ=255) ttCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGc > 2:153634/1‑149 (MQ=255) ttCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGc > 4:174679/1‑149 (MQ=255) ttCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGc < 1:153634/149‑1 (MQ=255) gCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGa < 3:152304/149‑1 (MQ=255) cACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGAt < 1:323342/149‑1 (MQ=255) cATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCAc > 1:457993/1‑149 (MQ=255) ggCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGa < 3:451998/149‑1 (MQ=255) ggCCTGTTTATCCAACAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGa < 1:87800/149‑1 (MQ=255) cTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCAt > 3:252757/1‑126 (MQ=255) cTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCAt < 4:252757/126‑1 (MQ=255) gTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATc > 1:180424/1‑149 (MQ=255) tttATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCt > 3:174175/1‑149 (MQ=255) tATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGc < 4:436310/149‑1 (MQ=255) aTCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGa < 1:54773/140‑1 (MQ=255) aTCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGa > 2:54773/1‑140 (MQ=255) aTCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCa < 1:31674/149‑1 (MQ=255) aTCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCa < 3:414511/149‑1 (MQ=255) tCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCat > 1:104395/1‑149 (MQ=255) ccAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCatt < 2:104395/149‑1 (MQ=255) cagcagCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCatta > 2:136602/1‑149 (MQ=255) | AGCTGCAGGCCGACCTTTTCATACTCCGCCAGCAGGTCCACCATTGCCTGGCCGCGATCGCGGGACTCGGCATGAACATGTTCGAACAGCAGCAGCGACGTGGTGCGCCCGCGGTCAAACACTTCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGATCACTTTGAGGATCTGCATTA > NC_000913/1537017‑1537311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |