| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,295,817 | Δ1 bp | 7.1% | intergenic (+23/+619) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,295,817 | 0 | A | . | 7.1% | 335.5 / 18.3 | 98 | intergenic (+23/+619) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base A (38/53); new base . (3/4); total (41/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.21e-01 | |||||||||||
CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATG > NC_000913/4295671‑4295955 | cGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCAc < 4:899428/148‑1 (MQ=255) caggcgttgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtaggcctgataagacgcggcaagcgtcgcatcaggcattcacacATTGCCGGG‑‑GATATCCACCCgg < 4:15169‑M1/22‑1 (MQ=255) gcgttgatgtcggatgcggcataaacgccttatccgacctacaaaatcacgctaaatcaggctattgcgctgtctggcgtaggcctgataagacgcggcaagcgtcgcatcaggcattcacacATTGCCGGG‑‑GATATCCACCCGGCaa > 3:15169‑M1/124‑148 (MQ=255) gTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAt > 4:55641/1‑148 (MQ=255) tGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtgtgtg < 2:869694/149‑1 (MQ=255) gcgcTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtgtgtg < 3:49380/148‑1 (MQ=255) cgcTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGaa < 2:472448/149‑1 (MQ=255) cgcTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGa < 4:429529/148‑1 (MQ=255) tGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATg < 4:573199/148‑1 (MQ=255) ggTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGa < 2:279041/149‑1 (MQ=255) ggTGAATGCAAAGTAGGAACACAAATTTGACAGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCTGG‑‑GATATCCATCTGGCAATGTGTGAATGCCTGATGCTAc < 2:453294/149‑1 (MQ=255) gTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCGGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACg > 1:742494/1‑149 (MQ=255) tGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACg < 4:740199/148‑1 (MQ=255) ttGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCtt > 3:795572/1‑148 (MQ=255) gCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGcc > 2:512950/1‑149 (MQ=255) gCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGc < 4:397052/148‑1 (MQ=255) ccAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGcc > 4:708999/1‑148 (MQ=255) aGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCcgcg < 4:983879/148‑1 (MQ=255) gTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTc < 1:803761/149‑1 (MQ=255) gTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTc < 1:707872/149‑1 (MQ=255) tGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtgtg > 3:669539/1‑119 (MQ=255) tGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtgtg < 4:669539/119‑1 (MQ=255) tGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGa < 3:643311/130‑1 (MQ=255) tGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGa > 4:643311/1‑130 (MQ=255) acacAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATc < 3:671420/148‑1 (MQ=255) cacaAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCa < 4:644830/148‑1 (MQ=255) acaAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 2:946599/149‑1 (MQ=255) acaAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 1:506111/1‑149 (MQ=255) caAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg > 4:841682/1‑148 (MQ=255) caAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc < 2:700619/149‑1 (MQ=255) aaTTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt > 2:29443/1‑149 (MQ=255) tttGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc > 1:715634/1‑149 (MQ=255) aCCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTAATGCGACGCTTGCCGCGTCTTATCAGGCCTACGcc < 4:962958/148‑1 (MQ=255) ccGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCAACCGGCAATGTGTGCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCGTACGCCa < 4:714448/148‑1 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg > 2:479937/1‑149 (MQ=255) gAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg > 1:280177/1‑149 (MQ=255) aaaGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg > 4:23549/1‑148 (MQ=255) cgcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt < 3:918988/148‑1 (MQ=255) cgcTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa < 1:603471/149‑1 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGTGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGGGCAATAGcc < 1:924894/149‑1 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGcc < 2:691560/149‑1 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc < 3:841682/148‑1 (MQ=255) tGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc < 4:477102/148‑1 (MQ=255) ggCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATTATGCCTACGCCAGACAGCGCAATAGcc < 4:219036/148‑1 (MQ=255) gCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt > 4:211716/1‑143 (MQ=255) gCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAt < 3:211716/143‑1 (MQ=255) cTTATGAGGGTGAAGTGCTGGGCAAATGTGATAAAACTGCGGATCGATAAGTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCAGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTg < 3:23448/148‑1 (MQ=37) ttATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAt > 1:46348/1‑149 (MQ=255) gAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAg > 1:804538/1‑149 (MQ=255) aGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAg < 3:336849/148‑1 (MQ=255) cGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGt < 2:715634/149‑1 (MQ=255) gTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTg > 1:754210/1‑149 (MQ=255) aaGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTAt > 1:144383/1‑106 (MQ=255) aaGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTAt < 2:144383/106‑1 (MQ=255) gTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt > 1:940600/1‑149 (MQ=255) gTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGAtttt < 1:1038835/149‑1 (MQ=255) tGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtg > 3:36306/1‑68 (MQ=255) tGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAAtg < 4:36306/68‑1 (MQ=255) cTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 3:988355/148‑1 (MQ=255) cTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGt < 3:23549/148‑1 (MQ=255) cTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 2:280177/149‑1 (MQ=255) cTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 1:479937/149‑1 (MQ=255) gCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGt > 4:992838/1‑148 (MQ=255) tttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATa > 2:268090/1‑149 (MQ=255) ttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATa > 3:744315/1‑148 (MQ=255) ttGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATa > 3:527956/1‑148 (MQ=255) tGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa < 4:784694/148‑1 (MQ=255) tAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCtt > 3:1026950/1‑85 (MQ=255) tAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCtt < 4:1026950/85‑1 (MQ=255) aaaaCTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGt < 2:46348/149‑1 (MQ=255) aCTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGttt > 3:133125/1‑148 (MQ=255) tGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAt < 3:625679/148‑1 (MQ=255) cGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGc < 3:124155/148‑1 (MQ=255) gATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGc > 1:296647/1‑149 (MQ=255) tCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTa > 1:70103/1‑74 (MQ=255) tCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTa < 2:70103/74‑1 (MQ=255) cAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCAt < 3:160190/148‑1 (MQ=255) aataatTGAAGATTGCCGGG‑‑GATATCCACCCGGCGATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc > 2:817468/1‑149 (MQ=255) aataatTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc > 1:717301/1‑149 (MQ=255) ataatTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATcc > 4:798252/1‑148 (MQ=255) taatTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCg > 3:92225/1‑148 (MQ=255) ttcacacATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATGAGGCGTTTAt > 3:989645‑M1/8‑136 (MQ=255) ttcacacATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATGAGGCGTTTAt < 4:989645‑M1/129‑1 (MQ=255) atTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAc < 4:527956/148‑1 (MQ=255) ttGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt > 1:381969/1‑149 (MQ=255) cacacATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAg > 3:519087‑M1/6‑81 (MQ=255) cacacATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAg < 4:519087‑M1/76‑1 (MQ=255) cacATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCaa < 2:700480‑M1/146‑1 (MQ=255) aGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAt > 2:348750/1‑131 (MQ=255) aGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAt < 1:348750/131‑1 (MQ=255) cATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCgg > 4:1047972‑M1/2‑117 (MQ=255) cATTGCCGGGTGGATATCC‑‑CCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCgg < 3:1047972‑M1/116‑1 (MQ=255) ttGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa > 4:822625/1‑119 (MQ=255) ttGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATaa < 3:822625/119‑1 (MQ=255) tGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCt < 2:847668/149‑1 (MQ=255) ccGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTg < 4:744315/148‑1 (MQ=255) ccGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGa < 1:553730/149‑1 (MQ=255) ggg‑‑gATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg > 2:633374/1‑149 (MQ=255) | CGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAATTGAAGATTGCCGGG‑‑GATATCCACCCGGCAATGTGTGAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATG > NC_000913/4295671‑4295955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |