BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3901949	92 (0.790)	3 (0.030)	3/244	NT	3.0%	coding (272/1617 nt)	bglH	carbohydrate‑specific outer membrane porin, cryptic
*	?	NC_000913	= 3901970	110 (1.010)	3 (0.030)	3/244	NT	3.0%	coding (251/1617 nt)	bglH	carbohydrate‑specific outer membrane porin, cryptic
Rejected: Frequency below/above cutoff threshold.

Only 100 of 123 total aligned reads displayed.

CGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTGCGTTTCTC  >  NC_000913/3901809‑3902096

cGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATc                                                                                                                                              <  3:450185/148‑1 (MQ=255)

  gTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAg                                                                                                                                            <  4:322400/148‑1 (MQ=255)

  gTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTCCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAg                                                                                                                                            <  3:629305/148‑1 (MQ=255)

   tCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTGTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGTCATTTTTCTCTCCATTTTTGACCAGTACAGCATCAgg                                                                                                                                           <  3:657554/148‑1 (MQ=255)

        cAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTg                                                                                                                                      >  3:465958/1‑148 (MQ=255)

        cAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTg                                                                                                                                      >  3:55476/1‑148 (MQ=255)

                aCGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtac                                                                                                                             >  1:770908‑M2/1‑146 (MQ=255)

                   gTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtactgg                                                                                                                          >  1:65973‑M2/1‑143 (MQ=255)

                     aaTAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtactggtc                                                                                                                        >  1:722389‑M2/1‑141 (MQ=255)

                      aTAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCGTTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtactggtc                                                                                                                        >  4:630175‑M2/1‑140 (MQ=255)

                      aTAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtactggtc                                                                                                                        <  4:640181‑M2/148‑9 (MQ=255)

                       tAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCgg                                                                                                                      <  2:471451/149‑1 (MQ=255)

                         gCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGCTCggg                                                                                                                     >  3:837867/1‑148 (MQ=255)

                             ttGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtac                                                                                                                             >  1:1059945‑M2/1‑133 (MQ=255)

                             ttGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtac                                                                                                                             <  2:1059945‑M2/136‑4 (MQ=255)

                             ttGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACtac                                                                                                                             >  1:831227‑M2/1‑133 (MQ=255)

                              tGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACgg                                                                                                                <  4:725421/148‑1 (MQ=255)

                              tGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGa                                                                                                               <  2:374573/149‑1 (MQ=255)

                                   cTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTggc                                                                                                          <  2:528910/149‑1 (MQ=255)

                                     aaaGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTggc                                                                                                          >  3:175273/1‑147 (MQ=255)

                                        gCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCAt                                                                                                     >  1:168952/1‑149 (MQ=255)

                                             tttCATCTTTCACAAATTTACTGAATTCTGTCAGAGACATGGAAGAATAAATCGAGCCTCTCTGACTGGCATTTATCTCTTCATTTTTGACCAGTAgtgccgcaaaacctgatgctgtcctggtcaaaaatgaggagaaaaatgccag                                                                                                 <  4:886137‑M1/148‑53 (MQ=255)

                                              ttCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCtt                                                                                               <  2:829940/149‑1 (MQ=255)

                                              ttCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCt                                                                                                <  3:479989/148‑1 (MQ=255)

                                                cATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTg                                                                                              <  3:819774/148‑1 (MQ=255)

                                                cATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGa                                                                                             <  1:833260/149‑1 (MQ=255)

                                                  tCTTTCACACATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTAgtgccgcaaaacctgatgctgtactggtc                                                                                                                        >  2:345701‑M1/1‑91 (MQ=255)

                                                  tCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTAgtgccgcaaaacctgatgctgtactggtc                                                                                                                        <  1:345701‑M1/120‑30 (MQ=255)

                                                      tCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTc                                                                                       <  1:112117/149‑1 (MQ=255)

                                                       tacaAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCAACAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCg                                                                                      <  2:879183/148‑1 (MQ=255)

                                                         caAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGt                                                                                     >  3:177229/1‑148 (MQ=255)

                                                           aaTTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACt                                                                                  >  1:185040/1‑149 (MQ=255)

                                                            aTTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACtt                                                                                 >  1:62947/1‑149 (MQ=255)

                                                             tttACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACtt                                                                                 <  3:624569/148‑1 (MQ=255)

                                                                 cTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCTCTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGc                                                                             <  3:673757/148‑1 (MQ=255)

                                                                  tGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCt                                                                            <  4:216272/148‑1 (MQ=255)

                                                                   gAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTa                                                                           >  3:175857/1‑148 (MQ=255)

                                                                     aaTCTTTCAGAGTCATGGAAGTATCAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGa                                                                        <  1:447844/149‑1 (MQ=255)

                                                                     aaTCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACg                                                                         <  3:330628/148‑1 (MQ=255)

                                                                     aaTCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACg                                                                         <  4:533515/148‑1 (MQ=255)

                                                                        cTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGAtt                                                                      >  3:298978/1‑148 (MQ=255)

                                                                          ttCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCAc                                                                   <  1:514528/149‑1 (MQ=255)

                                                                                  cATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCt                                                            >  4:533796/1‑148 (MQ=255)

                                                                                    tGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGc                                                         <  1:710363/149‑1 (MQ=255)

                                                                                    tGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGc                                                         <  1:919582/149‑1 (MQ=255)

                                                                                       aagaaTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTc                                                                                       <  4:202807/116‑1 (MQ=255)

                                                                                       aagaaTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGta                                                      >  2:193216/1‑149 (MQ=255)

                                                                                          aaTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGtata                                                    <  3:833571/148‑1 (MQ=255)

                                                                                          aaTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGtata                                                    >  3:537765/1‑148 (MQ=255)

                                                                                          aaTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATAc                                                   <  1:434937/149‑1 (MQ=255)

                                                                                           aTAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATAc                                                   >  4:106218/1‑148 (MQ=255)

                                                                                              aaTCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACttt                                                >  4:259050/1‑148 (MQ=255)

                                                                                               aTCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACttttt                                              >  2:347033/1‑149 (MQ=255)

                                                                                               aTCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACttttt                                              <  2:277557/149‑1 (MQ=255)

                                                                                                           tcACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCAt                                   <  3:106218/148‑1 (MQ=255)

                                                                                                            cACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATc                                  >  3:23788/1‑148 (MQ=255)

                                                                                                             aCTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCtt                                >  1:547157/1‑149 (MQ=255)

                                                                                                              cTGGCATTTTTCTCCTCATTTTTGACCAGGACAGCATCAGGTTTTGCGGCACtactggtcaaaaatgaagagataaatgccagtcagagaggctcgatttattcttccatgtctctgacagaattcagtaaatttgtgaaagatgaaa                                <  4:886137‑M2/148‑97 (MQ=255)

                                                                                                               tGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCAc                                                                   >  2:841272/1‑112 (MQ=255)

                                                                                                               tGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCAc                                                                   <  1:841272/112‑1 (MQ=255)

                                                                                                                ggCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTta                              <  3:896854/148‑1 (MQ=255)

                                                                                                                ggCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTta                              >  3:245982/1‑148 (MQ=255)

                                                                                                                ggCATTTTTCTCTTCATTGTTGACCAGTACAGCATCAGGTTTTGCGGCACTGCTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACATACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTta                              >  4:896854/1‑148 (MQ=255)

                                                                                                                 gaaTTTTTCGCTTCATGTTTGACCAGTATAGCATCCGGTTTTGCGGCGCTACTGGTCGTTAACGGATTGGCGGCATACCCTTTATCATTCGTCCTTACGCTACGATTCAGCGTCGCTGGCTTATACTATTCCTTCTCTTCATCCTtata                            >  2:477144/3‑149 (MQ=255)

                                                                                                                 gCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCGTCTTtat                             <  3:975263/148‑1 (MQ=255)

                                                                                                                 gCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTtat                             <  4:465958/148‑1 (MQ=255)

                                                                                                                 gCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTtat                             <  3:640181/148‑1 (MQ=255)

                                                                                                                  cATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATAc                           >  2:254055/1‑149 (MQ=255)

                                                                                                                    tttttCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTttcttc                                          >  1:527590/1‑132 (MQ=255)

                                                                                                                    tttttCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTttcttc                                          <  2:527590/132‑1 (MQ=255)

                                                                                                                    tttttCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACt                          >  3:188027/1‑148 (MQ=255)

                                                                                                                       ttCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACtttt                       <  4:55476/148‑1 (MQ=255)

                                                                                                                         ctctTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTg                     <  3:856660/148‑1 (MQ=255)

                                                                                                                         ctctTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTg                     <  3:533796/148‑1 (MQ=255)

                                                                                                                         ctctTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTg                     <  3:432276/148‑1 (MQ=255)

                                                                                                                         ctctTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGa                    <  1:771750/149‑1 (MQ=255)

                                                                                                                         ctctTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGa                    <  2:11882/149‑1 (MQ=255)

                                                                                                                            ttCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCAtt                                                                                        >  2:79861/1‑78 (MQ=255)

                                                                                                                             tCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGtt                 >  3:391058/1‑148 (MQ=255)

                                                                                                                               aTTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTg                     >  3:1003874/1‑142 (MQ=255)

                                                                                                                               aTTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTg                     <  4:1003874/142‑1 (MQ=255)

                                                                                                                                 ttttGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCa                                    >  4:12539/1‑125 (MQ=255)

                                                                                                                                 ttttGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCa                                    <  3:12539/125‑1 (MQ=255)

                                                                                                                                    tGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTg          <  4:537765/148‑1 (MQ=255)

                                                                                                                                    tGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTGc         <  1:318267/149‑1 (MQ=255)

                                                                                                                                     gACCAGTAgtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaacggctat         <  4:640181‑M1/148‑141 (MQ=255)

                                                                                                                                     gACCAGTAgtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaacgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaacggctat         >  4:630175‑M1/1‑8 (MQ=255)

                                                                                                                                     gACCAGTACAGCATCAGGTTTTGCGGCACtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaaga                                     <  1:345701‑M2/120‑92 (MQ=255)

                                                                                                                                     gACCAGTACAGCATCAGGTTTTGCGGCACtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatgtgtgaaaga                                     >  2:345701‑M2/1‑29 (MQ=255)

                                                                                                                                       ccAGTAgtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaacggctattac      >  1:65973‑M1/1‑6 (MQ=255)

                                                                                                                                          gtagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaacggctattaccgt   >  1:770908‑M1/1‑3 (MQ=255)

                                                                                                                                          gtagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaa                >  1:1059945‑M1/1‑3 (MQ=255)

                                                                                                                                          gtagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaa                >  1:831227‑M1/1‑3 (MQ=255)

                                                                                                                                          gtagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaa                <  2:1059945‑M1/136‑134 (MQ=255)

                                                                                                                                          gtagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgaaattggctttagttacaa                <  2:831227‑M1/136‑134 (MQ=255)

                                                                                                                                          gTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTtata                            <  2:337769/124‑1 (MQ=255)

                                                                                                                                          gTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTtata                            >  1:337769/1‑124 (MQ=255)

                                                                                                                                          gTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTGCGTTtct   >  2:212953/1‑149 (MQ=255)

                                                                                                                                          gTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTGCGTTtct   <  2:81910/149‑1 (MQ=255)

                                                                                                                                           tagtgccgcaaaacctgatgctgtactggtcaaaaatgaagagaaaaatgccagtgagacaggctcgatttattcttccatgactctgaaagatttcagtaaatttgtgaaagatgtaattggctttagttacaacggctattaccgtt  >  2:191021‑M1/1‑2 (MQ=255)

CGGTCCCCCAACCAGAACGGTAATAGCCGTTGTAACTAAAGCCAATTTCATCTTTCACAAATTTACTGAAATCTTTCAGAGTCATGGAAGAATAAATCGAGCCTGTCTCACTGGCATTTTTCTCTTCATTTTTGACCAGTACAGCATCAGGTTTTGCGGCACTACTGGTCGGGAACGGATTGGCGGCATACCCTTGATCATTCGTACTTACGCTACGATTCACCGTCGCTGGCGTATACTTTTTCTTCTCTTCATCTTTATACTTTTTGAGTTCGCTTTGCGTTTCTC  >  NC_000913/3901809‑3902096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.