New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3817582571 (4.890)9 (0.080) 7/242 NT 1.6% intergenic (+43/‑178) yicC/dinD UPF0701 family protein/DNA damage‑inducible protein
?NC_000913 = 3817594 577 (5.320)intergenic (+55/‑166) yicC/dinD UPF0701 family protein/DNA damage‑inducible protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 659 total aligned reads displayed.

GTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGAT  >  NC_000913/3817446‑3817742
                                                                                                                                                    |                                                                                                                                                     
 tCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACaga                                                                                                                                                       >  4:1057973/1‑148 (MQ=255)
 tCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAg                                                                                                                                                      <  2:865037‑M2/149‑2 (MQ=255)
        cTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAgcggcat                                                                                                                                                <  3:979730‑M2/148‑8 (MQ=255)
         tATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGGGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAgcggcattt                                                                                                                                              <  2:172181‑M2/149‑10 (MQ=255)
          aTCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAgcggcattt                                                                                                                                              <  4:299754‑M2/148‑10 (MQ=255)
           tCAATGACGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATTCTCGAGCAGATTCAGAACATCGAATCACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAtttt                                                                                                                                             <  4:74920/148‑1 (MQ=255)
            cAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttc                                                                                                                                           >  2:77345/1‑149 (MQ=255)
            cAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttc                                                                                                                                           <  1:335266/149‑1 (MQ=255)
             aaTGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttct                                                                                                                                          <  1:30263/149‑1 (MQ=255)
                        gACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAAc                                                                                                                                >  3:3629/1‑148 (MQ=255)
                         aCAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                                              >  2:415605/1‑149 (MQ=255)
                         aCAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                                              >  2:56469/1‑149 (MQ=255)
                          cAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                                              <  3:179143/148‑1 (MQ=255)
                           aaaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTc                                                                                                                            <  1:717661/149‑1 (MQ=255)
                                ccGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTc                                                                                                                       >  1:17999/1‑149 (MQ=255)
                                 cGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCt                                                                                                                      <  1:498326/149‑1 (MQ=255)
                                   ccATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGt                                                                                                                    <  1:1050916/149‑1 (MQ=255)
                                    cATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                                           <  4:598263/141‑1 (MQ=255)
                                    cATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGtt                                                                                                                   >  1:557101/1‑149 (MQ=255)
                                     aTCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAACAACTCGTAACGCCAATTCATACTTTTCCGCCTCCACTAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGtt                                                                                                                   <  4:780499/148‑1 (MQ=255)
                                          gCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGt                                                                                                             <  2:212093/149‑1 (MQ=255)
                                            tGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTg                                                                                                            <  4:1026747/148‑1 (MQ=255)
                                             gAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGc                                                                                                           >  4:184594/1‑148 (MQ=255)
                                              aaaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAtttt                                                                                                                                             >  3:916114/1‑113 (MQ=255)
                                              aaaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGcc                                                                                                          >  3:859172/1‑148 (MQ=255)
                                                   gtTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTcc                                                                                                    >  2:958888/1‑149 (MQ=255)
                                                    ttgattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                                                   >  1:781110/1‑149 (MQ=255)
                                                    ttgattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                                                   >  1:215264/1‑149 (MQ=255)
                                                      gattgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttttt                                                                                                                                            <  1:412995/106‑1 (MQ=255)
                                                        ttgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGAtt                                                                                               >  1:684890/1‑149 (MQ=255)
                                                          gaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGttt                                                                                                                  <  2:443040/128‑1 (MQ=255)
                                                          gaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGAtttt                                                                                             >  2:144573/1‑149 (MQ=255)
                                                            gCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGc                                                                                           >  1:451107/1‑149 (MQ=255)
                                                               gATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGAt                                                                                        >  1:381298/1‑149 (MQ=255)
                                                                  gcgcGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑t                                                                                     <  3:552834/148‑1 (MQ=255)
                                                                      gAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑ttttt                                                                                 <  2:73071/148‑1 (MQ=255)
                                                                       agtaGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑ttttttt                                                                               >  1:1000069/4‑149 (MQ=255)
                                                                       aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑tttttt                                                                                <  4:691480/148‑1 (MQ=255)
                                                                            aTTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGccc                                                                           <  4:257129/148‑1 (MQ=255)
                                                                            aTTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTACGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCa                                                                          >  2:234151/1‑149 (MQ=255)
                                                                             ttCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCa                                                                          >  3:503195/1‑148 (MQ=255)
                                                                              tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAg                                                                         >  3:753568/1‑148 (MQ=255)
                                                                                 gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGAtttt                                                                                             >  1:634829/1‑126 (MQ=255)
                                                                                 gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTTGCCCAGcac                                                                      >  2:119722/1‑149 (MQ=255)
                                                                                 gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGcaca                                                                     >  1:953482/1‑149 (MQ=255)
                                                                                 gAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGcaca                                                                     >  1:835542/1‑149 (MQ=255)
                                                                                  aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAg                                                                         <  4:89738/144‑1 (MQ=255)
                                                                                  aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCacac                                                                    >  2:906583/1‑149 (MQ=255)
                                                                                   aCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCacac                                                                    <  4:885781/148‑1 (MQ=255)
                                                                                   aCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACt                                                                   >  1:585399/1‑149 (MQ=255)
                                                                                     aTCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTg                                                                  >  3:724780/1‑148 (MQ=255)
                                                                                      tCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTga                                                                 >  4:144210/1‑148 (MQ=255)
                                                                                      tCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTga                                                                 <  3:591363/148‑1 (MQ=255)
                                                                                       cGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑tttt                                                                                  >  4:64688/1‑130 (MQ=255)
                                                                                        gAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGcc                                                                            <  2:307805/135‑1 (MQ=255)
                                                                                        gAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGaa                                                              >  1:429253/1‑149 (MQ=255)
                                                                                        gAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGaa                                                              <  2:280599/149‑1 (MQ=255)
                                                                                         aaTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTg                                                                                            >  3:299837/1‑119 (MQ=255)
                                                                                          aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTg                                                                                            <  1:905867/118‑1 (MQ=255)
                                                                                           tAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGt                                                           <  2:585399/149‑1 (MQ=255)
                                                                                             aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTg                                                          <  3:65008/148‑1 (MQ=255)
                                                                                              cTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTg                                                          <  2:82563/147‑1 (MQ=255)
                                                                                                   aaCGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATAc                                                    >  4:425473/1‑148 (MQ=255)
                                                                                                    aCGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTc                                                  >  2:1075114/1‑149 (MQ=255)
                                                                                                    aCGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTc                                                  <  2:632824/149‑1 (MQ=255)
                                                                                                        cAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTcaca                                               <  3:108123/148‑1 (MQ=255)
                                                                                                        cAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTcaca                                               <  3:425473/148‑1 (MQ=255)
                                                                                                        cAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACaa                                              >  2:519529/1‑149 (MQ=255)
                                                                                                           ttCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                                           <  2:394631/149‑1 (MQ=255)
                                                                                                            tCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTg                                           <  3:820130/148‑1 (MQ=255)
                                                                                                              ttACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGcc                                                                            >  2:995455/1‑113 (MQ=255)
                                                                                                                  ttttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaa                                    >  2:1037286/1‑149 (MQ=255)
                                                                                                                   tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGTACACTGAGAACGTGAGATACTCACAACTGTATATaa                                    >  4:715654/1‑148 (MQ=255)
                                                                                                                   tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaaa                                   <  1:138674/149‑1 (MQ=255)
                                                                                                                   tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATaa                                    <  3:250484/148‑1 (MQ=255)
                                                                                                                        gCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACa                               <  4:544123/148‑1 (MQ=255)
                                                                                                                        gCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTAGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAg                              <  1:253729/149‑1 (MQ=255)
                                                                                                                         ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGt                             >  2:677259/1‑149 (MQ=255)
                                                                                                                          cTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATTTATATACAGtt                            <  1:11694/149‑1 (MQ=255)
                                                                                                                           ttCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGtt                            <  4:960787/148‑1 (MQ=255)
                                                                                                                           ttCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGtt                            >  3:797352/1‑148 (MQ=255)
                                                                                                                           ttCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTa                           >  2:352798/1‑149 (MQ=255)
                                                                                                                            tCACAAATGCCGCCACTCAAACAGAgcggcatttgtgaaggcggaaaagtaagaattggcgttacgagttattcgatgt                                                                                                 >  4:46332‑M2/1‑25 (MQ=255)
                                                                                                                             cacaAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTAc                          <  3:13219/148‑1 (MQ=255)
                                                                                                                               caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAg                        <  3:464159/148‑1 (MQ=255)
                                                                                                                                aaaTGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAt                      <  1:865037/149‑1 (MQ=255)
                                                                                                                                   tGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAttt                    <  3:267764/148‑1 (MQ=255)
                                                                                                                                   tGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGAttt                    >  4:832850/1‑148 (MQ=255)
                                                                                                                                    gccgccACTCAAGCAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTa                   <  3:941161/148‑1 (MQ=255)
                                                                                                                                    gccgccACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTa                   <  4:341450/148‑1 (MQ=255)
                                                                                                                                    gccgccACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTa                   <  4:917190/148‑1 (MQ=255)
                                                                                                                                        ccACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttc              <  1:747658/149‑1 (MQ=255)
                                                                                                                                          aCTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttctt            >  1:992374/1‑149 (MQ=255)
                                                                                                                                          aCTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttct             <  4:514496/148‑1 (MQ=255)
                                                                                                                                           cTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTActttcttt           <  2:485605/149‑1 (MQ=255)
                                                                                                                                             cAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTg                                                                                                                >  3:709178/1‑47 (MQ=255)
                                                                                                                                             cAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACg                                                            <  3:891515/98‑1 (MQ=255)
                                                                                                                                             cAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTg          >  3:215511/1‑148 (MQ=255)
                                                                                                                                             cAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTg          <  3:519778/148‑1 (MQ=255)
                                                                                                                                               aaCAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCaa       >  2:605804/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATG‑TTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATTGAT  >  NC_000913/3817446‑3817742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.