New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3962703NA (NA)7 (0.060) 7/248 NT NA noncoding (4/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3962735 NA (NA)noncoding (36/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 142 total aligned reads displayed.

TCTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGCCTGTAATG  >  NC_000913/3962587‑3962881
                                                                                                                                                    |                                                                                                                                                  
 cTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGC                                                                                                                                                    <  3:739397‑M2/148‑1 (MQ=255)
 cTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGC                                                                                                                                                    <  4:209054‑M2/148‑1 (MQ=255)
  tGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                                                                                                  >  2:711556/1‑149 (MQ=255)
   gATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                                                                                                  >  4:52775/1‑148 (MQ=255)
      ttGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCTGCACTTa                                                                                                                                               <  4:91744/148‑1 (MQ=255)
      ttGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTa                                                                                                                                               <  3:461287/148‑1 (MQ=255)
      ttGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                                                                                              >  2:488961/1‑149 (MQ=255)
        gggAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                                                                                                            >  2:1011382/1‑149 (MQ=255)
        gggAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                                                                                                            <  2:638358/149‑1 (MQ=255)
         ggAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                                                                                                           >  2:855733/1‑149 (MQ=255)
          gAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCac                                                                                                                                          <  2:911636/149‑2 (MQ=255)
          gAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                                                                                                           <  4:524724/148‑1 (MQ=255)
           aaCAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                                                                                                         >  2:589830/1‑149 (MQ=255)
            aCAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTa                                                                                                                                        >  2:754502/1‑149 (MQ=255)
             cAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTaa                                                                                                                                       <  2:861023/149‑1 (MQ=255)
              aagAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                                                                                                      >  1:434955/3‑149 (MQ=255)
              aGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTaa                                                                                                                                       <  4:289711/148‑1 (MQ=255)
              aGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                                                                                                      <  2:1018599/149‑1 (MQ=255)
              aGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                                                                                                      >  2:519306/1‑149 (MQ=255)
                       aaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCa                                                                                                                             <  1:488961/149‑1 (MQ=255)
                                gcgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGt                                                                                                                    >  1:624941/1‑149 (MQ=255)
                                 cgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGt                                                                                                                    <  3:363390/148‑1 (MQ=255)
                                 cgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTg                                                                                                                   <  1:431695/149‑1 (MQ=255)
                                  gcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTg                                                                                                                   >  4:195757/1‑148 (MQ=255)
                                     gaagaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGAc                                                                                                                >  4:122575/1‑148 (MQ=255)
                                         aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                                                                                                           >  1:1009600/1‑149 (MQ=255)
                                          aCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                                                                                                           >  4:353481/1‑148 (MQ=255)
                                          aCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                                                                                                           <  3:932524/148‑1 (MQ=255)
                                              aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTg                                                                                                       >  4:392837/1‑148 (MQ=255)
                                                  aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                                                                                                  >  1:204229/1‑149 (MQ=255)
                                                  aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                                                                                                  <  1:597548/149‑1 (MQ=255)
                                                   gAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                                                                                                  >  3:1053541/1‑148 (MQ=255)
                                                     aaGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTgg                                                                                                >  3:133872/1‑148 (MQ=255)
                                                           aaaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTcc                                                                                          <  4:20508/148‑1 (MQ=255)
                                                            atggcATCTGGCGAATGTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTg                                                                                        >  2:455949/5‑149 (MQ=255)
                                                               ccATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg                                                                                      >  4:246835/1‑148 (MQ=255)
                                                                 aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaa                                                                                   <  1:72190/149‑1 (MQ=255)
                                                                      gCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                                                                                                 >  1:41613/1‑114 (MQ=255)
                                                                      gCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGa                                                                                                                 <  2:41613/114‑1 (MQ=255)
                                                                        gAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAAtctc                                                                            <  2:202373/149‑1 (MQ=255)
                                                                          aTCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCtt                                                                          <  1:455949/149‑1 (MQ=255)
                                                                           tCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCtt                                                                          <  4:396939/148‑1 (MQ=255)
                                                                             tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTAc                                                                       <  1:754502/149‑1 (MQ=255)
                                                                                 aGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAg                                                                   >  2:435202/1‑149 (MQ=255)
                                                                                   cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGc                                                                  <  3:879344/148‑1 (MQ=255)
                                                                                          ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGtt                                                           <  3:195757/148‑1 (MQ=255)
                                                                                          ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTg                                                          <  1:538987/149‑1 (MQ=255)
                                                                                           gcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTgg                                                         <  1:183678/149‑1 (MQ=255)
                                                                                            cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTggg                                                        <  2:624941/149‑1 (MQ=255)
                                                                                            cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTgg                                                         <  3:640584/148‑1 (MQ=255)
                                                                                             ggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGtt                                                           <  2:571530/145‑1 (MQ=255)
                                                                                             ggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGtt                                                           >  1:571530/1‑145 (MQ=255)
                                                                                                  aaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGcc                                                  >  1:574949/1‑149 (MQ=255)
                                                                                                     gAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAAc                                               >  2:284008/1‑149 (MQ=255)
                                                                                                      aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAAc                                               >  4:898442/1‑148 (MQ=255)
                                                                                                          aaaTAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTg                                           <  4:739397/148‑1 (MQ=255)
                                                                                                          aaaTAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGc                                          >  2:607734/1‑149 (MQ=255)
                                                                                                           aataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGc                                          >  3:1029837/1‑148 (MQ=255)
                                                                                                             taatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTCGGGTTAGCCAACCTTGCGGa                                       <  1:855733/149‑1 (MQ=255)
                                                                                                               atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAg                                     >  2:854673/1‑149 (MQ=255)
                                                                                                                tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGc                                          >  1:634262/1‑143 (MQ=255)
                                                                                                                tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAg                                     <  4:286826/148‑1 (MQ=255)
                                                                                                                tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAg                                     <  3:778164/148‑1 (MQ=255)
                                                                                                                     gCCGGAAAAGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgc                                                               >  4:267592‑M2/1‑32 (MQ=255)
                                                                                                                     gCCGGAAAAGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgc                                                               <  3:267592‑M2/117‑86 (MQ=255)
                                                                                                                     gCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCaa                               <  2:251558/149‑1 (MQ=255)
                                                                                                                     gCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCa                                <  3:1010452/148‑1 (MQ=255)
                                                                                                                     gCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCGCTGCCACTGGCTTTCCTGAGCAATAATCTCtt                                                                          >  2:408726/1‑106 (MQ=255)
                                                                                                                      ccGGAAAAGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgacc                                                          <  4:473899‑M2/121‑91 (MQ=255)
                                                                                                                      ccGGAAAAGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgacc                                                          >  3:473899‑M2/1‑31 (MQ=255)
                                                                                                                      ccGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCaa                               <  3:567475/148‑1 (MQ=255)
                                                                                                                      ccGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCaa                               <  4:414443/148‑1 (MQ=255)
                                                                                                                       cGGAAAAGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgaccactttgcgctcctgttcccaaatcagatc                             <  1:859641‑M2/149‑120 (MQ=255)
                                                                                                                          aaaaGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTc                           >  4:370448/1‑148 (MQ=255)
                                                                                                                           aaaGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCa                          <  3:491537/148‑1 (MQ=255)
                                                                                                                            aaGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAAc                        <  1:519306/149‑1 (MQ=255)
                                                                                                                             aGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatg                                                                                               <  3:152518‑M2/77‑54 (MQ=255)
                                                                                                                             aGATGCGTCAGCATCGCATCCGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatg                                                                                               >  4:152518‑M2/1‑24 (MQ=255)
                                                                                                                             aGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAAc                        <  3:353481/148‑1 (MQ=255)
                                                                                                                              gATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACa                       <  3:739049/148‑1 (MQ=255)
                                                                                                                                    tCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATg                <  1:405500/149‑1 (MQ=255)
                                                                                                                                    tCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATg                >  2:107889/1‑149 (MQ=255)
                                                                                                                                     cAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTc                                                                                           <  3:175638/73‑1 (MQ=255)
                                                                                                                                     cAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCAt                 >  4:633627/1‑147 (MQ=255)
                                                                                                                                     cAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATgg               >  1:127686/1‑149 (MQ=255)
                                                                                                                                     cAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATgg               >  2:175488/1‑149 (MQ=255)
                                                                                                                                     cAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATg                <  3:988860/148‑1 (MQ=255)
                                                                                                                                         atcgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTa            <  4:1053541/148‑1 (MQ=255)
                                                                                                                                          tcgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGc          >  2:620499/1‑149 (MQ=255)
                                                                                                                                           cgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGc          >  3:668576/1‑148 (MQ=255)
                                                                                                                                           cgcatcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGc          <  3:898442/148‑1 (MQ=255)
                                                                                                                                               tcCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGCCTGt      >  3:931543/1‑148 (MQ=255)
                                                                                                                                                ccGGCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgaccactgtgcgctcctgtccccaaatcagatcatcctgcggcagctccagcaaaaag    >  2:72190‑M2/1‑5 (MQ=255)
                                                                                                                                                ccGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGCCTGTa     >  3:493765/1‑148 (MQ=255)
                                                                                                                                                 cGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGCCTGTAAt   <  2:442872/149‑1 (MQ=255)
                                                                                                                                                  ggCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgaccactttgcgctcctgttcccaaatcagatcatcctgcggcagctccagcaaaaagc   >  4:810069‑M2/1‑3 (MQ=255)
                                                                                                                                                   gCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgaccactttgcgctcctgttcccaaatcagatcatcctgcggcagctccagcaaaaagcg  >  4:363390‑M2/1‑2 (MQ=255)
                                                                                                                                                   gCcttgattatttccctcgttttgccgccatcatcgctttcagattcgccagatggctttgccctttctgcatccgttcttcggcgctgaccactttgcgctccggttcccaaaacagatcatcctgcggcagctccagcaaaaagcg  >  4:1010452‑M2/1‑2 (MQ=255)
                                                                                                                                                   gCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGtt             <  2:680306/137‑1 (MQ=255)
                                                                                                                                                   gCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGtt             >  1:680306/1‑137 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TCTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAATCTCTTTACCCAGCGGATGTTGGGTTAGCCAACCTTGCGGAAGCGTCAAGGTCAACAGTTCATGGTTAGCCTGTAATG  >  NC_000913/3962587‑3962881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.