| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 448,364 | G→T | 5.1% | I99I (ATC→ATA) | cyoC ← | cytochrome o ubiquinol oxidase subunit III |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 448,364 | 0 | G | T | 5.1% | 439.3 / 6.8 | 126 | I99I (ATC→ATA) | cyoC | cytochrome o ubiquinol oxidase subunit III |
| Reads supporting (aligned to +/- strand): ref base G (53/66); new base T (4/3); total (57/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
GCAGACCGTGCGTGCCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGTTCACC > NC_000913/448216‑448511 | cAGACCGTGCGTGCCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGgag > 4:849802/1‑148 (MQ=255) aGACCGTGCGTGCCGACCAGCGCAAAGGACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACGAAACAACCAGGTCAACGCCAGCCAGGAGAt > 1:697850/1‑149 (MQ=255) aCCGTGCGTGCCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATaa < 2:342997/149‑1 (MQ=255) cgtgcgtgCCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAAc < 3:851225/148‑1 (MQ=255) tgcgtgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCt < 3:872480/148‑1 (MQ=255) tgcgtgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCt > 3:665774/1‑148 (MQ=255) gcgtgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTg < 4:17184/148‑1 (MQ=255) cgtgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTgg < 3:1047000/148‑1 (MQ=255) cgtgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGc < 1:507545/149‑1 (MQ=255) tgcCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGTTATCTCCTGGCt < 3:525200/148‑1 (MQ=255) ccGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCttt < 3:697422/148‑1 (MQ=255) ccGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCttt < 4:555254/148‑1 (MQ=255) cGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTttg < 1:425986/149‑1 (MQ=255) gACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTttgt < 2:30871/149‑1 (MQ=255) aCCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCATGTCAACGCCAGCCAGGAGAGAACCTGGCTTttgt < 4:445102/148‑1 (MQ=255) aCCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGTTATCTCCTGGCtggcgtt < 1:9969/149‑7 (MQ=255) aCCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTttgtt < 2:4336/149‑1 (MQ=255) aCCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTttgt < 4:285286/148‑1 (MQ=255) aCCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTttgt > 4:270001/1‑148 (MQ=255) aGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTgttgtt > 2:422318/1‑149 (MQ=255) gcgcAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGttt < 1:230407/149‑1 (MQ=255) gcgcAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGttt < 2:818084/149‑1 (MQ=255) cgcAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGtttt < 1:329626/149‑1 (MQ=255) cgcAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGttt > 4:671176/1‑148 (MQ=255) gcAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGtttt < 4:665774/148‑1 (MQ=255) cAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGttttt > 3:635751/1‑148 (MQ=255) agaGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTg < 4:254485/146‑1 (MQ=255) aaGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTa < 1:792677/149‑1 (MQ=255) aaCGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACAt > 1:810718/1‑149 (MQ=255) cGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATgg < 1:142313/149‑1 (MQ=255) ggAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACTTGGCGATAgc < 3:928000/148‑1 (MQ=255) cTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATAGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGc > 4:872306/1‑148 (MQ=255) gATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTa < 3:1020367/148‑1 (MQ=255) tCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAAc < 2:741340/101‑1 (MQ=255) gACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGAt < 3:43233/148‑1 (MQ=255) gACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATg > 1:261137/1‑149 (MQ=255) cATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTAc > 3:1020028/1‑115 (MQ=255) aTGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAg < 2:775100/147‑1 (MQ=255) aTGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAg > 1:775100/1‑147 (MQ=255) aTGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGc < 4:233768/148‑1 (MQ=255) tGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATACCCTGGCTTTTGTTGTTTTTGTACATGGCGCTAGCCGCCCTGCCGTAGGTGATGGAGCt > 4:1058269/1‑148 (MQ=255) tGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCt > 4:1057677/1‑148 (MQ=255) ccGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGaa < 1:1043592/149‑1 (MQ=255) ttAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGaacaa > 2:451292/1‑149 (MQ=255) tAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGaacaa > 4:805777/1‑148 (MQ=255) aaCAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCACCATGCCGTAGGTGATGGAGCTGaacaac < 4:762093/148‑1 (MQ=255) aaTCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCa > 2:88010/1‑149 (MQ=255) ggTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGaaa < 2:273654/149‑1 (MQ=255) ggTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGaa < 4:397098/148‑1 (MQ=255) gatGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGaa > 4:541637/3‑148 (MQ=255) tGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGttt < 3:541637/148‑1 (MQ=255) tGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTc < 1:798884/149‑1 (MQ=255) tGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTc < 2:896362/149‑1 (MQ=255) ttCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGtt < 2:481675/142‑1 (MQ=255) ttCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGtt > 1:481675/1‑142 (MQ=255) ttCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCa < 2:918693/149‑1 (MQ=255) tCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTTTTTTTGTACATGGCGATAGCCGCCATg > 1:259181/1‑105 (MQ=255) tCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATg < 2:259181/105‑1 (MQ=255) aTAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaa > 2:80033/1‑149 (MQ=255) aTAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaa > 2:635166/1‑149 (MQ=255) aTAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGCGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaa > 2:143781/1‑149 (MQ=255) aGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaac > 3:730301/1‑148 (MQ=255) tttCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaacgaac > 1:961586/1‑149 (MQ=255) tttCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAgaacgaa < 3:270001/148‑1 (MQ=255) tCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAg > 3:648636/1‑148 (MQ=255) tCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAg > 4:1020962/1‑148 (MQ=255) tCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAg > 4:643337/1‑148 (MQ=255) gATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCg < 3:950857/148‑1 (MQ=255) tAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTTGGGGATGGAGCTGAACAACAGCAAGAAAGGTTCAACCAGAACGAACGGCAGTTCGaa > 3:827238/1‑148 (MQ=255) aaaTCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGaaa > 4:435797/1‑148 (MQ=255) cGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAg < 4:1039488/124‑1 (MQ=255) cGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAg > 3:1039488/1‑124 (MQ=255) cGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTcc < 1:1017731/149‑1 (MQ=255) aCCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTa < 3:12650/148‑1 (MQ=255) aCCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTAc < 2:1060566/149‑1 (MQ=255) ccAAACAACCAGGTCAACGCCAGCCAGTAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCTTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTAc < 3:1058269/148‑1 (MQ=255) cAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCt > 1:121725/1‑149 (MQ=255) aaaCAATCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAGCAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCt > 4:895388/1‑148 (MQ=255) aaaCAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGaaaa > 1:1001217/1‑137 (MQ=255) aaaCAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGaaaa < 2:1001217/137‑1 (MQ=255) aacaacCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCaa > 1:365620/1‑112 (MQ=255) aacaacCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCaa < 2:365620/112‑1 (MQ=255) cAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGgcc > 1:64061/1‑149 (MQ=255) tCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCt > 2:57161/1‑149 (MQ=255) acaaaagccagGTTATCTCCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACCACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGgccgc < 2:1060774/139‑1 (MQ=255) acaaaagccagGTTATCTCCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGgccgc > 1:1060774/6‑144 (MQ=255) aCGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGc > 3:483357/1‑148 (MQ=255) aCGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCg < 2:724044/149‑1 (MQ=255) caaaagccagGTTATCTCCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCgg > 2:862004/5‑149 (MQ=255) aaaagccagGTTATCTCCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCaa > 1:536432/4‑86 (MQ=38) gccagGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGcc > 4:559645/1‑148 (MQ=255) agGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGtt > 4:237807/1‑148 (MQ=255) agGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGtt > 3:741295/1‑148 (MQ=255) ggAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGaaaa < 1:595843/113‑1 (MQ=255) ggAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGaaaa > 2:595843/1‑113 (MQ=255) ggAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGTTc > 3:807204/1‑148 (MQ=255) agaTAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAAt > 2:421986/1‑112 (MQ=255) agaTAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAAt < 1:421986/112‑1 (MQ=255) agaTAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGTTCAcc < 1:854575/149‑1 (MQ=255) gaTAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGTTCAcc < 4:807204/148‑1 (MQ=255) | GCAGACCGTGCGTGCCGACCAGCGCAAAGAACGCTGACAGGAAGCCGCTGCGATCCGGACCCATGCCGTTAACAATCAGGTGATGGAATTCATAGATTTCCATCCCGATAAATCCGGCACCAAACAACCAGGTCAACGCCAGCCAGGAGATAACCTGGCTTTTGTTGTTTTTGTACATGGCGATAGCCGCCATGCCGTAGGTGATGGAGCTGAACAACAGCAAGAAAGTTTCAACCAGAACGAACGGCAGTTCGAAAATGTCCTTACCTGTCGGGCCGCCTGCGGTGCCGTTCACC > NC_000913/448216‑448511 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |