| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,106,369 | T→G | 5.9% | intergenic (+49/‑100) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,106,369 | 0 | T | G | 5.9% | 565.0 / 25.0 | 169 | intergenic (+49/‑100) | cpxP/fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| Reads supporting (aligned to +/- strand): ref base T (78/80); new base G (2/8); total (80/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.17e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
ACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCGA > NC_000913/4106224‑4106517 | caacaaCGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTgg < 1:406519/149‑1 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCA‑TGTggggg < 1:452339/149‑1 (MQ=255) caacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCA‑TGTgggg < 3:145757/148‑1 (MQ=255) aacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑t > 1:821442/1‑149 (MQ=255) aacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCA‑TGTggggga < 1:242010/149‑2 (MQ=255) aacGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACA‑GCATGTggggg < 4:542718/148‑1 (MQ=255) acGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCA‑TGTggggga < 4:479867/148‑2 (MQ=255) cGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tt < 3:275154/148‑1 (MQ=255) cGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACAGCA‑TGTgggggaag < 1:965507/149‑4 (MQ=255) gAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tttt < 2:750223/149‑1 (MQ=255) aaTGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑ttttt < 1:175266/149‑1 (MQ=255) aaTGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tttt < 3:526675/148‑1 (MQ=255) aTGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGATTTCCTTGCCATAGACACCATCCCTGTCTT‑‑CCCACATGC‑TGTGGGGG‑ttttttt > 4:264236/1‑148 (MQ=255) tGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tttttt > 3:211879/1‑148 (MQ=255) cAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTAt > 4:757031/1‑147 (MQ=255) ttGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTAt < 3:842976/144‑1 (MQ=255) ttGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTAt > 4:842976/1‑144 (MQ=255) tGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCaa < 2:26993/149‑1 (MQ=255) tGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCa < 4:641514/148‑1 (MQ=255) gacgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGc < 1:546602/149‑1 (MQ=255) cgtgacgGAATGGCAAAAAAGTTCATCCTTGAAGCTATTGACTAGTAGCAACCCACGTTCCAAGTAGTATACGCTCTTATCCTTTCTATAGACACCATCCCAGTCTTCCCCCACATGC‑TGTCGGGG‑TTTTTATTATCCTCAATTTGCct < 2:773393/149‑1 (MQ=255) cgtgacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGcc > 3:379278/1‑148 (MQ=255) gacgCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCctgct < 2:953315/149‑1 (MQ=255) cAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTgctgct > 4:473825/1‑148 (MQ=255) aaTGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTa > 2:823816/1‑149 (MQ=255) tGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAAt < 1:627984/149‑1 (MQ=255) gccAAAAAAGTTCATCGTTAAAGCTATTAATAATTGGCACCTCCCTTTCCCAGTAGTAACCCCGGTTTTCCTTGCAATAGACCCCTCCCCTGCCTCCCCCCCAATGC‑TG‑GGGGG‑GTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc < 2:821442/147‑1 (MQ=255) aaaaaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt > 2:518225/1‑149 (MQ=255) aaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg < 3:578225/148‑1 (MQ=255) aaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg > 4:118647/1‑148 (MQ=255) aaaGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc < 2:1031777/149‑1 (MQ=255) ttCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCTTCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTCCCCGCTTCTTAATGCATCGCCgat > 2:842300/1‑149 (MQ=255) aTCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat > 1:361742/1‑149 (MQ=255) cGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAttt < 1:248891/149‑1 (MQ=255) cGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt > 3:598597/1‑148 (MQ=255) gAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCtt > 1:800913/1‑149 (MQ=255) gAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCtt > 2:571636/1‑149 (MQ=255) cTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg < 4:211879/148‑1 (MQ=255) cTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCg < 3:149188/148‑1 (MQ=255) tATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGtt > 2:372478/1‑149 (MQ=255) aTTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta > 1:607196/1‑149 (MQ=255) ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tttt < 1:116419/93‑1 (MQ=255) ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑tttt > 2:116419/1‑93 (MQ=255) tGAGTAGTAGCAACTCACGTTGCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCTTCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCGCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCATtat > 4:660566/1‑148 (MQ=255) tGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTtat < 4:597428/148‑1 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATAc < 2:326581/149‑1 (MQ=255) gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt < 3:118647/148‑1 (MQ=255) gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTa > 2:97998/1‑149 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGc > 1:966251/1‑105 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg < 1:823816/149‑1 (MQ=255) tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt > 1:1038419/1‑119 (MQ=255) tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt < 2:1038419/119‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTc > 3:466033/1‑148 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGt > 2:1790/1‑149 (MQ=255) aCTCGCGTTCCCCGTTGTAAAACCTTTTTTTCTTGCCATAGACACCCACCCTGTCTTCCCCCACCTGA‑TGTGGGGG‑TTTTTTTTTCCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGtt < 1:842300/149‑1 (MQ=255) aCGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTGGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATa < 2:123156/149‑1 (MQ=255) ttCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGc > 4:218011/1‑148 (MQ=255) ttCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGc > 3:843391/1‑148 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg > 4:763667/1‑148 (MQ=255) ccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAAt > 1:56310/1‑99 (MQ=255) ccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa < 1:22931/149‑1 (MQ=255) gtagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGt > 3:1055700/1‑148 (MQ=255) gtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt > 2:974858/1‑149 (MQ=255) taAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa < 2:46592/149‑1 (MQ=255) aaaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa < 4:394204/148‑1 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGGTTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTAt < 2:480639/149‑1 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTTCTGCTTAATGCATTGCAGATGATTTGCTTCTGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaa < 3:405527/148‑1 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaat > 1:717907/1‑149 (MQ=255) cTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatc > 1:335201/1‑149 (MQ=255) tGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑‑CCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaa < 3:264236/148‑1 (MQ=255) ttttCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTAt < 4:232770/60‑1 (MQ=255) ttttCCGTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGaatcaa > 4:958652/1‑148 (MQ=255) cTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTAt < 1:472151/149‑1 (MQ=255) ttGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTAt < 4:147521/148‑1 (MQ=255) ttGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATg > 1:52294/1‑149 (MQ=255) ttGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATg > 1:442594/1‑149 (MQ=255) gCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGa < 2:204644/149‑1 (MQ=255) ccATAGACGCCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGACTGCTGCTTAATGCATTGCAGATTATTTGCTTCCGTTATACTCGCGTCAGCTGATAGCGGGAGTATTTATGAATCAATCTTATGGa < 3:660566/148‑1 (MQ=255) ccATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGa < 4:13299/148‑1 (MQ=255) gACACCATCCCTGTCGTCCCCCTCATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCATGCTGCTTAATGCATTGCAGATGATTTGCTTCCGCTATACGAGCGTCAGTTGATAGCGGGAGTATTGATGATTCAATCTTATGGACGGCTg < 2:135473/149‑1 (MQ=255) ccATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 3:809895/1‑148 (MQ=255) ccATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 3:155009/1‑148 (MQ=255) ccATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTCCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTc > 4:792152/1‑148 (MQ=255) aTCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg < 4:1033801/69‑1 (MQ=255) aTCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTg > 3:1033801/1‑69 (MQ=255) tCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGt > 3:425476/1‑148 (MQ=255) cccTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCg > 1:713564/1‑149 (MQ=255) tCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGggcgg > 2:125029/1‑149 (MQ=255) tCCCCCACATGC‑TATGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGTAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGCTAGCGGAAGTATTTATAAATCAATCTTATGGACGCCTGGTCAGTCGGGCGGCGa > 2:409356/1‑149 (MQ=255) cccccACAGCA‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGa < 3:922379/112‑1 (MQ=255) cccACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtg < 2:212904/149‑1 (MQ=255) cccACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtg < 1:125029/149‑1 (MQ=255) ccACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCtt < 1:1000971/118‑1 (MQ=255) ccACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCtt > 2:1000971/1‑118 (MQ=255) ccACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgc > 2:663405/1‑149 (MQ=255) cacaTGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATtgc > 3:854879/1‑148 (MQ=255) acaTGC‑TGTGGGGG‑TTTTTTTTATCCCCAATTTGCCTGCTGCTTAATGCATTGCAGATGACTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATAGACGGCTGGTCAGTCGGGCGGCCAGtgctg < 2:733330/149‑1 (MQ=255) caTGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCATATGGACGGCTGGTCAGTCGGTCGGCGATtgctg > 3:190575/1‑148 (MQ=255) tGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg > 4:1002842/1‑93 (MQ=255) tGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCggg < 3:1002842/93‑1 (MQ=255) | ACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCCACATGC‑TGTGGGGG‑TTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCGA > NC_000913/4106224‑4106517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |