| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,353,171 | C→G | 5.5% | intergenic (+90/+29) | ghoT → / ← lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,353,171 | 0 | C | G | 5.5% | 447.2 / 11.6 | 128 | intergenic (+90/+29) | ghoT/lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| Reads supporting (aligned to +/- strand): ref base C (60/60); new base G (3/4); total (64/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTGGCG > NC_000913/4353026‑4353309 | tCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCt > 4:102837/1‑148 (MQ=255) cGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTg > 3:457658/1‑148 (MQ=255) aTAACCTGGCCGATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGTTGAACGAAGCAGTC‑GCCTGACTGc > 1:797499/1‑149 (MQ=255) aaCCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑AGGCGACTGCtt < 2:432900/149‑1 (MQ=255) aCCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGTAACGATGAACGAAGCAGTC‑GCCTGACTGCTTc < 2:23084/149‑1 (MQ=255) cTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGt > 2:1070520/1‑149 (MQ=255) ggCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTc < 1:35686/145‑1 (MQ=255) gcgaaTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCa < 1:1038984/146‑1 (MQ=255) ccAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTATTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTGCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCAt < 1:453962/149‑1 (MQ=255) cAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCAtt < 1:447508/149‑1 (MQ=255) aaTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCAtt > 3:57602/1‑148 (MQ=255) aaTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTa > 2:30135/1‑149 (MQ=255) aaTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTa > 1:863234/1‑149 (MQ=255) aaTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTa > 1:254193/1‑149 (MQ=255) aTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTa > 3:225923/1‑148 (MQ=255) aTGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTa > 3:400646/1‑148 (MQ=255) tGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTaa < 3:723006/148‑1 (MQ=255) tCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTg > 4:215240/1‑148 (MQ=255) cTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGCAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GTCTGACTGCTTCGTTCATTAAAGTGa > 3:640937/1‑148 (MQ=255) tGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGaaa < 1:300337/149‑1 (MQ=255) tgtgGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAattt < 4:52211/148‑1 (MQ=255) gtgGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCCGACTGCTTCGTTCATTAAAGTGAAatttat < 1:22898/149‑1 (MQ=255) cATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTc > 3:917063/1‑148 (MQ=255) aTTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCtg > 2:829388/1‑149 (MQ=255) ttACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGtt > 2:66623/1‑125 (MQ=255) ttACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTaaa < 2:404851/132‑1 (MQ=255) cTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTggg < 2:951436/149‑1 (MQ=255) ttttttCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGgc > 2:653331/1‑149 (MQ=255) tttttCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGgc > 3:664680/1‑148 (MQ=255) tttttCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGgc > 4:979476/1‑148 (MQ=255) tctctTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCg < 4:811005/148‑1 (MQ=255) tctTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGcc > 3:221697/1‑148 (MQ=255) tctTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCg < 2:797499/149‑1 (MQ=255) tctTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCACAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGcc > 4:935276/1‑148 (MQ=255) ctTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCg < 4:457658/148‑1 (MQ=255) ttttAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCgg > 4:943789/1‑148 (MQ=255) ttAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGa < 4:225923/148‑1 (MQ=255) aGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAag < 4:89059/148‑1 (MQ=255) aGGAGCTGTAGTTGAGTGGACCCGCTGGTTATAGTGAAACGAAGCGTCTCTCCTCAAAAATGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAaga < 2:815645/149‑1 (MQ=255) aGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAgaga < 4:30389/148‑1 (MQ=255) gCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAAt < 1:653331/149‑1 (MQ=255) cTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATa < 2:102711/149‑1 (MQ=255) gTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTc > 2:906380/1‑149 (MQ=255) gTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTc < 1:891073/149‑1 (MQ=255) tGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTcgc < 2:957490/149‑1 (MQ=255) tGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTcg < 4:57602/148‑1 (MQ=255) ggACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAAt < 4:640357/148‑1 (MQ=255) aCCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAg > 3:363024/1‑148 (MQ=255) aCCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGt > 1:393292/1‑149 (MQ=255) cccGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTa < 1:1062879/149‑1 (MQ=255) ccGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAag > 4:574330/1‑127 (MQ=255) ccGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAag < 3:574330/127‑1 (MQ=255) ccGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTAt < 1:1070520/149‑1 (MQ=255) cGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTAt < 4:58129/148‑1 (MQ=255) cTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATgg > 4:253777/1‑148 (MQ=255) gTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCta < 4:363024/148‑2 (MQ=255) tATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTa < 1:819847/149‑1 (MQ=255) gTGAAACGAAGCGTCTCTCCTCATAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTaa > 2:857533/1‑149 (MQ=255) gTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTaa > 1:658923/1‑149 (MQ=255) aaaCGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTACAGTg > 4:685652/1‑80 (MQ=255) aaaCGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAAc < 4:1035786/148‑1 (MQ=255) cGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCa > 1:992719/1‑149 (MQ=255) aaGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGc > 3:264811/1‑132 (MQ=255) cGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAAt < 3:941606/148‑1 (MQ=255) cGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATc < 2:220443/149‑1 (MQ=255) gTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCa > 2:955820/1‑149 (MQ=255) ctctcCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCAt < 4:917063/148‑1 (MQ=255) ctcctcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTc < 4:664680/148‑1 (MQ=255) ctcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGt < 2:45934/124‑1 (MQ=255) ctcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGt > 1:45934/1‑124 (MQ=255) ctcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGt < 4:529554/148‑1 (MQ=255) tcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTc > 4:974473/1‑148 (MQ=255) tcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCg > 1:51128/1‑149 (MQ=255) tcAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCg > 2:219375/1‑149 (MQ=255) cAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATaa > 4:372158/1‑101 (MQ=255) cAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTTTGGCTGTTAGTAAACAGCATAATCATTCGGTCg > 4:200582/1‑148 (MQ=255) cAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAAc < 3:624067/130‑1 (MQ=255) cAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAAc > 4:624067/1‑130 (MQ=255) cAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGa > 2:39959/1‑149 (MQ=255) aaaaCTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGAt < 2:658923/149‑1 (MQ=255) aaaCTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATa < 1:829388/149‑1 (MQ=255) aaCTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATAc < 2:51128/149‑1 (MQ=255) gATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATa < 1:39959/149‑1 (MQ=255) tGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATAccc < 3:979476/148‑1 (MQ=255) tttaaTGAACGAAGCAGTCAGGC‑GACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCa > 1:314098/5‑149 (MQ=39) aaCGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGa < 3:542766/132‑1 (MQ=255) gATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGc < 3:580081/148‑1 (MQ=255) tGAACGAAGCAGTC‑GCCTGACTTCTTCGTTCAGTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGt > 2:632564/1‑92 (MQ=255) tGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGt < 1:632564/92‑1 (MQ=255) gAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCAGTGGGCGCATCGCCGGTAAGAGAATAACGTCACGAATATTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGt > 3:480159/1‑148 (MQ=255) gAACGAAGCAGTC‑AGGCGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGtt > 2:435093/1‑149 (MQ=255) aaCGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTg > 1:723731/1‑149 (MQ=255) aggAAGCAGTC‑CCCTGAGTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCCGGCAGAGAATAACGTCGCGAATTGTATGGCTGTTAAGAAACAGCAGAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTg > 4:348611/3‑148 (MQ=255) aCGAAGCAGTC‑AGGCGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTgg < 2:314098/149‑1 (MQ=255) aCGAAGCAGTC‑AGGCGACTGCTTCGATCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGc > 3:778403/1‑108 (MQ=39) gAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAagag < 1:204738/69‑1 (MQ=255) gAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAagag > 2:204738/1‑69 (MQ=255) gAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTggcg < 1:857533/149‑1 (MQ=255) gAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTggcg > 2:345435/1‑149 (MQ=255) gAAGCAGTC‑AGGCGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATAc < 2:1064347/131‑1 (MQ=255) | TCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTGCGGAACGATGAACGAAGCAGTC‑GCCTGACTGCTTCGTTCATTAAAGTGAAATTTATTTCTGTGGGCGCATCGCCGGGAAGAGAATAACGTCGCGAATAGTATGGCTGTTAGTAAACAGCATAATCATTCGGTCGATACCAATACCCAGACCAGCGGTTGGCG > NC_000913/4353026‑4353309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |