| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 53968 | 109 (0.640) | 9 (0.050) | 9/248 | NT | 7.6% | coding (735/1287 nt) | surA | peptidyl‑prolyl cis‑trans isomerase (PPIase) |
| ? | NC_000913 | = 53983 | 114 (0.690) | coding (720/1287 nt) | surA | peptidyl‑prolyl cis‑trans isomerase (PPIase) | |||||
GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/53817‑53968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGCCAT < NC_000913/53983‑53836 GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAAT > 4:521144/1‑149GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAAT < 3:1124622/149‑1GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAAT < 4:449890/149‑1GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAAT > 3:74413/1‑149 GACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGC > 1:1375627/1‑149 GACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGC < 2:181805/149‑1 GACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGC > 4:827082/1‑149 GACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGC > 4:816299/1‑149 GAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATTAAGCAC < 3:815507/149‑1 CTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATTAAGCACCGC > 4:1194097/1‑149 CGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATT < 1:471899/130‑1 CGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATT > 2:471899/1‑130 CTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCAT < 3:242729/116‑1 CTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCAT > 4:242729/1‑116 TATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATTAAG > 1:256555/1‑89 TATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCCCGGGATCTTCGCCCAGGCATTAAG < 2:256555/89‑1 CTTTCTTCGCGGTGCTTAATGCCTGGGCGAAGATCCCGGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGT > 3:1194097/1‑149 TGCCCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGC > 4:928940/1‑149 CCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGCCAT > 2:196247/1‑149 CCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCAT < 4:107203/140‑1 CCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCAT > 3:107203/1‑140 GCGACGGTTTCAGCAGAATATGGCGAGCATGAACTTCGGTCACCGAGATATTTTTGCTTTCGCCGCGCAGGTCGTTAACTTTCAGAATATGGAAGCCAACGCCGGAACGAATCGGGCCAACAATGTCGCCTTTCTTCGCGGTGCTTAATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/53817‑53968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGCCAT < NC_000913/53983‑53836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |