New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2025238158 (0.920)9 (0.060) 7/236 NT 5.5% noncoding (76/87 nt) dsrA sRNA antisense regulator enhances translation of RpoS, Hfq‑dependent
?NC_000913 = 2025243 164 (1.040)noncoding (71/87 nt) dsrA sRNA antisense regulator enhances translation of RpoS, Hfq‑dependent

Only 100 of 214 total aligned reads displayed.

TCGCAGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTACTTATGAA  >  NC_000913/2025090‑2025386
                                                                                                                                                    |                                                                                                                                                    
    aGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAg                                                                                                                                                  <  1:1474963/149‑1 (MQ=255)
       cAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGgg                                                                                                                                               >  2:433629‑M2/1‑147 (MQ=255)
            cGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCcctcagggtcgg                                                                                                                                          <  3:813881‑M1/149‑13 (MQ=255)
            cGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGgggtcgg                                                                                                                                          >  1:78199‑M2/1‑142 (MQ=255)
              aTTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGgggtcggga                                                                                                                                        >  4:803354‑M2/1‑140 (MQ=255)
                  tGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAgg                                                                                                                                                 <  3:724703/136‑1 (MQ=255)
                   gAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGa                                                                                                                                                   >  3:1501572/1‑133 (MQ=255)
                   gAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGaaa                                                                                                                                   <  1:383289/149‑1 (MQ=255)
                   gAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGaaa                                                                                                                                   <  1:1505105/149‑1 (MQ=255)
                     acacGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACt                                                                                                                                 <  3:707820/149‑1 (MQ=255)
                     acacGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCATTCGAACTGGATATTCATGACTTCAGCGTCTCGGAAGTGAATCGTCGAATGCACAATAAAAAAATCCCGACCCCCTCAgggtcgggattttttt                                                                                                                                 >  4:1152163‑M2/1‑133 (MQ=255)
                     acaaGTGAGCGAAGATGGATGTGAATATAATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGAAAGTCATTACTTCAGCGCCTCGGGAGTGAGTTGTTTAATGTACAATAAAAAAGTCCCGTCCCCGAGGGGGTCGTGATGAAACt                                                                                                                                 <  4:455509/149‑1 (MQ=255)
                        cGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGc                                                                                                                              <  3:522095/149‑1 (MQ=255)
                        cGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGc                                                                                                                              <  4:464175/149‑1 (MQ=255)
                         gTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCt                                                                                                                             <  1:868074/149‑1 (MQ=255)
                         gTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCt                                                                                                                             >  2:324244/1‑149 (MQ=255)
                         gTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCt                                                                                                                             <  4:826302/149‑1 (MQ=255)
                         gTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCt                                                                                                                             >  3:974530/1‑149 (MQ=255)
                         gTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCt                                                                                                                             >  4:1504563/1‑149 (MQ=255)
                          ttAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACGATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCtt                                                                                                                            <  1:946239/149‑1 (MQ=255)
                          ttAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCtt                                                                                                                            <  4:1130314/149‑1 (MQ=255)
                            aGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTaa                                                                                                                          <  1:322392/149‑1 (MQ=255)
                            aGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTaa                                                                                                                          <  4:1457102/149‑1 (MQ=255)
                                tCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCaa                                                                                                                      >  3:368794/1‑149 (MQ=255)
                                  gATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAgg                                                                                                                                                 >  3:1044381/1‑120 (MQ=255)
                                   aTGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCaagaa                                                                                                                   <  2:1050399/149‑1 (MQ=255)
                                         gTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGGAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACtg                                                                                                             >  1:1139173/1‑148 (MQ=255)
                                         gTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGgggtcggg                                                                                                                                         <  3:1359462‑M2/121‑9 (MQ=255)
                                         gTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACtt                                                                                                             <  1:587960/149‑1 (MQ=255)
                                              tatCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTaaaaa                                                                                                        >  3:611158/1‑149 (MQ=255)
                                                tCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGc                                                                                                                              <  2:743806/125‑1 (MQ=255)
                                                tCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGc                                                                                                                              >  1:743806/1‑125 (MQ=255)
                                                tCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAt                                                                                                      <  2:1213892/149‑1 (MQ=255)
                                                tCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAt                                                                                                      >  2:421751/1‑149 (MQ=255)
                                                 cATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAtt                                                                                                     <  4:1521078/149‑1 (MQ=255)
                                                  aTACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTc                                                                                                    <  3:1005502/149‑1 (MQ=255)
                                                  aTACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTc                                                                                                    >  2:526229/1‑149 (MQ=255)
                                                  aTACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTc                                                                                                    <  4:561443/149‑1 (MQ=255)
                                                                   gCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAt                                                                                                      <  3:1505058/130‑1 (MQ=255)
                                                                     ggATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGa                                                                                 <  3:1245624/149‑1 (MQ=255)
                                                                     ggATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGa                                                                                 <  1:1069337/149‑1 (MQ=255)
                                                                       aTGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGAtg                                                                               >  1:1575395/1‑149 (MQ=255)
                                                                           cTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGtt                                                                           >  4:1239240/1‑149 (MQ=255)
                                                                            ttCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          >  3:1385440/1‑149 (MQ=255)
                                                                            ttCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          >  3:332409/1‑149 (MQ=255)
                                                                            ttCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          >  1:1004054/1‑149 (MQ=255)
                                                                            ttCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          <  2:1013220/149‑1 (MQ=255)
                                                                            ttCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          >  2:1578666/1‑149 (MQ=255)
                                                                             tCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACtt                                                                                                                                >  2:289142/1‑94 (MQ=255)
                                                                             tCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtca                                                                         <  3:1126763/149‑1 (MQ=255)
                                                                                   tGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCt                                                                   >  2:966834/1‑149 (MQ=255)
                                                                                    ggATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGAt                                                                                >  1:507816/1‑135 (MQ=255)
                                                                                       tatTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTa                                                                                                >  1:235322/1‑116 (MQ=255)
                                                                                            aTGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCcctcagggtcgggat                                                                                                                                       >  1:1152580‑M1/1‑57 (MQ=255)
                                                                                              gACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGAt                                                                                >  4:584252/1‑125 (MQ=255)
                                                                                                 ttCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAAttttt                                                     >  2:1165945/1‑149 (MQ=255)
                                                                                                 ttCAGCGTCTCTGAAGTGAATCGTTGAATGAACAATAAAAAAAACCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATGCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAAttttt                                                     <  1:1258875/149‑1 (MQ=255)
                                                                                                   cAGCGTCTCTGAAGTGAATCGTTGAATGCACAAT‑AAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTc                                                  <  1:1214258/149‑1 (MQ=255)
                                                                                                          tctGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATgtgt                                                                            >  4:374830/1‑117 (MQ=255)
                                                                                                          tctGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGAc                                            >  1:192997/1‑149 (MQ=255)
                                                                                                          tctGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGAc                                            >  3:38368/1‑149 (MQ=255)
                                                                                                            tGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGa                                                                                 <  3:1223667/110‑1 (MQ=255)
                                                                                                            tGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACaa                                          >  2:1459729/1‑149 (MQ=255)
                                                                                                            tGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACaa                                          >  4:1507458/1‑149 (MQ=255)
                                                                                                                   aaTCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAata                                   >  4:1491932/1‑149 (MQ=255)
                                                                                                                             tGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCatat                         <  4:38368/149‑1 (MQ=255)
                                                                                                                             tGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCatat                         <  1:692833/149‑1 (MQ=255)
                                                                                                                              gCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatg                        >  2:1133723/1‑149 (MQ=255)
                                                                                                                                acaATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaa                      >  3:427006/1‑149 (MQ=255)
                                                                                                                                acaATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaa                      <  3:207342/149‑1 (MQ=255)
                                                                                                                                acaATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaa                      >  4:1039138/1‑149 (MQ=255)
                                                                                                                                 caATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaat                     <  2:1289129/149‑1 (MQ=255)
                                                                                                                                  aaTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          <  1:89736/95‑1 (MQ=255)
                                                                                                                                  aaTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTtc                                                                          >  2:89736/1‑95 (MQ=255)
                                                                                                                                  aaTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaatg                    >  2:505817/1‑149 (MQ=255)
                                                                                                                                  aaTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaatg                    >  2:1306846/1‑149 (MQ=255)
                                                                                                                                   aTAAAAAAATCCCGACCCtgagggggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccag                                                                              >  3:650572‑M1/1‑18 (MQ=255)
                                                                                                                                   aTAAAAAAATCCCGACCCtgagggggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccag                                                                              <  4:650572‑M1/90‑73 (MQ=255)
                                                                                                                                   aTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATAtt                                 >  3:698238/1‑135 (MQ=255)
                                                                                                                                   aTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATAtt                                 <  4:698238/135‑1 (MQ=255)
                                                                                                                                   aTAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATatgaatga                   >  3:1070667/1‑149 (MQ=255)
                                                                                                                                      aaaaaaTCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTa                >  3:1198941/1‑149 (MQ=255)
                                                                                                                                        aaaaTCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAAc              <  4:70177/149‑1 (MQ=255)
                                                                                                                                        aaaaTCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAAc              <  4:1198941/149‑1 (MQ=255)
                                                                                                                                        aaaaTCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAAc              >  1:917802/1‑149 (MQ=255)
                                                                                                                                           aTCCCGACCCTGAGGgggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaacgtgttcagaa           <  1:1017913‑M2/149‑135 (MQ=255)
                                                                                                                                           aTCCCGACCCTGAGGgggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaacgtgttcagaa           <  3:1008489‑M2/149‑135 (MQ=255)
                                                                                                                                           aTCCCGACCCTGAGGgggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcat                                                                                        <  2:1152580‑M2/72‑58 (MQ=255)
                                                                                                                                             cccGACCCcctcagggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcac                                     >  4:1359462‑M1/1‑8 (MQ=255)
                                                                                                                                             cccGACCCTGAGGgggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaacgtgttcagaatc         <  4:187245‑M2/149‑137 (MQ=255)
                                                                                                                                              ccGACCCcctcagggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaac                     <  2:550484‑M1/136‑130 (MQ=255)
                                                                                                                                              ccGACCCcctcagggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaac                     >  1:550484‑M1/1‑7 (MQ=255)
                                                                                                                                              ccGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTaa               <  1:767356/142‑1 (MQ=255)
                                                                                                                                               cGACCCcctcagggtcgggatttttttattgtgcattcaacgattcacttcagagacgctgaagtcatgaatatccagttcgaaggcatccgccaattcacgccatgtatgatattcacgtccatcgacgctaacgtgttcagaatcgt       >  4:436138‑M1/1‑6 (MQ=255)
                                                                                                                                               cGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAGGAAGCACTGAAGAAATTCGTTACACCAGGATATATGATGTGTTCATCACCTTATCAGCTATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTAcgt       >  4:410886/1‑147 (MQ=255)
                                                                                                                                               cGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTACtt       >  4:320480/1‑149 (MQ=255)
                                                                                                                                                gACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAAttttttt                                                   <  2:794141/104‑1 (MQ=255)
                                                                                                                                                gACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAAc              >  4:762750/1‑141 (MQ=255)
                                                                                                                                                gACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTACTTa      >  2:717839/1‑149 (MQ=255)
                                                                                                                                                  cccTGAGGGGGTCGGGATGAAACGTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTACTTATg    <  1:1165945/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCGCAGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGAATGCACAATAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACACCAGGAAATCTGATGTGTTCATCACCTTATCCGCAATTTTTTTCGCTGACAAGAAAATATTCGCCATATGAATGATTAACGCTACTTATGAA  >  NC_000913/2025090‑2025386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.