BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3955396	126 (0.740)	7 (0.040)	7/244	NT	5.4%	coding (66/1545 nt)	ilvA	l‑threonine dehydratase, biosynthetic; also known as threonine deaminase
*	?	NC_000913	= 3955414	126 (0.770)	7 (0.040)	7/244	NT	5.4%	coding (84/1545 nt)	ilvA	l‑threonine dehydratase, biosynthetic; also known as threonine deaminase

Only 100 of 151 total aligned reads displayed.

TTTGCCCTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGG  >  NC_000913/3955248‑3955544

tttGCCCTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGC                                                                                                                                                      >  3:518087‑M1/1‑149 (MQ=255)

    cccTGCGTGCTTATGCCAGCCTGGCAACCGGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑gcgcgcgc                                                                                                                                                  >  2:972110/1‑149 (MQ=255)

    cccTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑gcgcgcgc                                                                                                                                                  <  2:175196/149‑1 (MQ=255)

     ccTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGcc                                                                                                                                                 >  3:305722/1‑149 (MQ=255)

       tGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCgg                                                                                                                                               >  4:70469/1‑149 (MQ=255)

       tGCGTGCTTATGCCAGCCTGCCAACCCGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGCTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCgg                                                                                                                                               <  4:1014707/149‑1 (MQ=255)

            gCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTAc                                                                                                                                          <  3:531803/149‑1 (MQ=255)

              ttATGCCAGCCTGGCAACCGGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGa                                                                                                                                        <  1:972110/149‑1 (MQ=255)

              ttATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGa                                                                                                                                        >  3:669578/1‑149 (MQ=255)

              ttATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGa                                                                                                                                        >  4:431214/1‑149 (MQ=255)

               tATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTGCGGCCATCCGGAAGGTGCCTAATATTTAAGAGCAGTGCC‑‑GCGCGCGCCGGTTTACGAg                                                                                                                                       <  4:1215153/149‑1 (MQ=255)

               tATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAg                                                                                                                                       <  4:1131836/149‑1 (MQ=255)

               tATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAg                                                                                                                                       >  1:742196/1‑149 (MQ=255)

                 tGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAggc                                                                                                                                     >  3:1353739/1‑149 (MQ=255)

                  gCCAGCCTGGCGACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAggcg                                                                                                                                    >  4:655897/1‑149 (MQ=255)

                  gCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAggcg                                                                                                                                    >  2:124274/1‑149 (MQ=255)

                      gCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCTGCGCGCcgcctcgtaaaccggcgcgc                                                                                                                                  <  4:347852‑M1/149‑21 (MQ=255)

                      gCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCcgcctcgtaaaccggcgcgcgc                                                                                                                                <  3:771401‑M1/149‑23 (MQ=255)

                         tGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAgg                                                                                                                             >  2:1514696/1‑149 (MQ=255)

                         tGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAgg                                                                                                                             >  4:1098692/1‑149 (MQ=255)

                          ggCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGt                                                                                                                            <  3:571628/149‑1 (MQ=255)

                          ggCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGt                                                                                                                            <  2:792649/149‑1 (MQ=255)

                          ggCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGt                                                                                                                            <  2:1158849/149‑1 (MQ=255)

                           gCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGtt                                                                                                                           >  3:296371/1‑149 (MQ=255)

                             aaCCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTAc                                                                                                                         >  1:258220/1‑149 (MQ=255)

                             aaCCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTAc                                                                                                                         <  2:1159293/149‑1 (MQ=255)

                              aCCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCcgcctcgtaaaccggcgcgcgcagcactgc                                                                                                                        <  4:1471197‑M1/149‑31 (MQ=255)

                              aCCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTAcg                                                                                                                        <  1:727434/149‑1 (MQ=255)

                                cAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTAcgcc                                                                                                                      >  3:826596/1‑149 (MQ=255)

                                cAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTAcgcc                                                                                                                      >  1:1523485/1‑149 (MQ=255)

                                       gACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTGATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaa                                                                                                               >  4:909489/1‑149 (MQ=255)

                                          aaaGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTa                                                                                                                  >  1:900509/1‑143 (MQ=255)

                                          aaaGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaaaaa                                                                                                            <  2:28177/149‑1 (MQ=255)

                                           aaGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTATGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaaaaaa                                                                                                           <  2:710638/149‑1 (MQ=255)

                                           aaGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTCAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaaaaaa                                                                                                           <  1:288169/149‑1 (MQ=255)

                                                gcgGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGaa                                                                                                      <  1:822702/149‑1 (MQ=255)

                                                         gATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCcgcctcgtaaaccggcgcgcgca                                                                                                                               <  4:981805‑M1/115‑24 (MQ=255)

                                                           tAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTgtcgtc                                                                                           <  3:431214/149‑1 (MQ=255)

                                                            aaaTCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑ACGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGtcgtcg                                                                                          >  1:345609/1‑149 (MQ=255)

                                                               tCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaaaaaa                                                                                                           <  1:483341/129‑1 (MQ=255)

                                                               tCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACaaaaaa                                                                                                           >  2:483341/1‑129 (MQ=255)

                                                               tCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGt                                                                                       >  3:179704/1‑149 (MQ=255)

                                                               tCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGt                                                                                       >  2:1068538/1‑149 (MQ=255)

                                                               tCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGt                                                                                       >  3:464369/1‑149 (MQ=255)

                                                               tCGAAACT‑GGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAAt                                                                                                          <  4:776636/129‑1 (MQ=255)

                                                                cGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTc                                                                                      <  2:742196/149‑1 (MQ=255)

                                                                   aaCTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTg                                                                                   >  2:1323911/1‑149 (MQ=255)

                                                                     cTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGAt                                                                                 <  4:826596/149‑1 (MQ=255)

                                                                        gggggTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAAc                                                                              <  3:1376577/149‑1 (MQ=255)

                                                                          gggTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGt                                                                            >  2:1333069/1‑149 (MQ=255)

                                                                             ttAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCAt                                                                         >  2:1020500/1‑149 (MQ=255)

                                                                                 taatGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTg                                                                     <  1:1484120/149‑1 (MQ=255)

                                                                                 taatGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTg                                                                     <  3:1498165/149‑1 (MQ=255)

                                                                                  aatGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTgg                                                                    <  3:703662/149‑1 (MQ=255)

                                                                                  aatGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTgg                                                                    <  4:1095552/149‑1 (MQ=255)

                                                                                      gCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGaa                                                                <  3:1317686/149‑1 (MQ=255)

                                                                                        tGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAgc                                                              >  2:1082217/1‑149 (MQ=255)

                                                                                         gACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAgcg                                                             >  4:274754/1‑149 (MQ=255)

                                                                                             cGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGaa                                                         >  1:225908/1‑149 (MQ=255)

                                                                                              gCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGaaaaa                                                                                                   >  1:709320/1‑106 (MQ=255)

                                                                                              gCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAg                                                        >  2:417332/1‑149 (MQ=255)

                                                                                               cAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGa                                                       <  1:124274/149‑1 (MQ=255)

                                                                                                aaCCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGAt                                                      <  3:1161945/149‑1 (MQ=255)

                                                                                                   cccTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTgtcgt                                                                                            >  1:102197/1‑108 (MQ=255)

                                                                                                   cccTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGAt                                                      <  4:211574/146‑1 (MQ=255)

                                                                                                    accttCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCgcc                                                  >  2:844045/5‑149 (MQ=255)

                                                                                                     cTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCgcca                                                 <  2:1205081/149‑1 (MQ=255)

                                                                                                        tCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTgtc                                                                                              <  1:556457/101‑1 (MQ=255)

                                                                                                        tCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTgtc                                                                                              >  2:556457/1‑101 (MQ=255)

                                                                                                            gTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTg                                          <  1:1514696/149‑1 (MQ=255)

                                                                                                            gTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGATTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTg                                          >  3:1219588/1‑149 (MQ=255)

                                                                                                            gTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑ACGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTg                                          <  2:345609/149‑1 (MQ=255)

                                                                                                             tGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGc                                         <  1:1020500/149‑1 (MQ=255)

                                                                                                                 ccGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAg                                     >  3:917740/1‑149 (MQ=255)

                                                                                                                    gAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCtt                                  <  1:1429828/149‑1 (MQ=255)

                                                                                                                     aaGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCttt                                 <  3:2665/149‑1 (MQ=255)

                                                                                                                      aGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTa                                <  2:898284/149‑1 (MQ=255)

                                                                                                                      aGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTa                                >  4:769474/1‑149 (MQ=255)

                                                                                                                      aGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTa                                >  1:1317881/1‑149 (MQ=255)

                                                                                                                            cGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTgc                          >  1:36885/1‑149 (MQ=255)

                                                                                                                             gAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTgcg                         >  1:1343417/1‑149 (MQ=255)

                                                                                                                              aaTATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAg                              <  2:1418248/143‑1 (MQ=255)

                                                                                                                              aaTATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAg                              >  1:1418248/1‑143 (MQ=255)

                                                                                                                                 atTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCgcggc                     <  1:110350/149‑1 (MQ=255)

                                                                                                                                  tttAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGc                                    >  1:1543548/1‑133 (MQ=255)

                                                                                                                                  tttAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGc                                    <  2:1543548/133‑1 (MQ=255)

                                                                                                                                     aaGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTg                                          <  1:686952/124‑1 (MQ=255)

                                                                                                                                     aaGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTg                                          >  2:686952/1‑124 (MQ=255)

                                                                                                                                      agagCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGTCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATa                >  4:1149407/1‑149 (MQ=255)

                                                                                                                                         gCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggt             <  4:1471197‑M2/149‑120 (MQ=255)

                                                                                                                                         gCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGc             <  1:1082217/149‑1 (MQ=255)

                                                                                                                                           aGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggttg           <  4:429710‑M2/149‑122 (MQ=255)

                                                                                                                                           aGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCa           <  1:381630/149‑1 (MQ=255)

                                                                                                                                               ct‑‑gcGCcgcctcgtaaaccggcgcgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggttgccag       >  3:28073‑M1/1‑6 (MQ=255)

                                                                                                                                                t‑‑gcGCGCGCCGGTTTACGAGGCGgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatc                                        >  3:981805‑M2/1‑23 (MQ=255)

                                                                                                                                                   gcgcgcgcCGGTTTACGAGGCGgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggttgccaggc     <  3:771401‑M2/149‑128 (MQ=255)

                                                                                                                                                    cgcgcgcCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGc    <  1:197690/149‑1 (MQ=255)

                                                                                                                                                     gcgcgcCGGTTTACGAGGCGgcgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggttgccaggc   <  4:347852‑M2/149‑130 (MQ=255)

                                                                                                                                                      cgcgcCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCgg  <  4:1232201/149‑1 (MQ=255)

                                                                                                                                                      ccgcctcgtaaaccggcgcgcgcagcactgctcttaaatattcggcaccttccggagcaccggacaggggttgcgagtcagccattattaaccccccagtttcgatttatcgcgcaccgcgcctttgtcggcgctggttgccaggctgg  >  3:628881‑M1/1‑1 (MQ=255)

TTTGCCCTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAATAATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCT‑‑GCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGG  >  NC_000913/3955248‑3955544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.