BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	NC_000913	1,293,124	IS5 (+) +4 bp	6.4%	intergenic (‑202/‑400)	hns ← / → tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1293124 =	162 (0.980)	17 (0.100)	16/256	NT	9.2%	intergenic (‑202/‑403)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
*	?	NC_000913	= 1300693	NA (NA)	17 (0.100)	16/256	NT	9.2%	noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	= 1293127	162 (0.980)	5 (0.030)	5/256	NT	2.9%	intergenic (‑205/‑400)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
*	?	NC_000913	= 2290113	NA (NA)	5 (0.030)	5/256	NT	2.9%	noncoding (1/1195 nt)	IS5	repeat region
Rejected: Frequency below/above cutoff threshold.

No reads uniquely aligned to region.