New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4425590 = | 178 (0.940) | 3 (0.020) | 3/246 | NT | 1.7% | coding (71/315 nt) | priB | primosomal protein N |
? | NC_000913 | 4425637 = | 185 (1.020) | coding (118/315 nt) | priB | primosomal protein N | |||||
Rejected: Frequency below/above cutoff threshold. |
TGAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4425743‑4425590 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggaaGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA > NC_000913/4425637‑4425781 TGAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTG < 1:1488201/149‑1 GAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 4:769479/149‑1 GAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 4:1342761/149‑1 GAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 3:1578279/149‑1 GAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGCGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 3:1409989/149‑1 GAACGGTTAAGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 1:6729/149‑1 AACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGCTTCTCAAGCACGAACTGGCAGTGAt < 2:1330274/149‑2 gggTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGCCACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA < 1:556474/146‑1 GGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA < 3:995413/149‑1 GACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA > 1:1345772/1‑134 GACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA < 2:1345772/134‑1 CCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA > 4:274676/1‑128 CCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA < 3:274676/128‑1 TAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTTAAGCACGAACTGGCAGTGA < 3:1012873/113‑1 TAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGA > 4:1012873/1‑113 GGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATA > 3:794128/1‑149 CCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGT > 1:614479/1‑149 CTCCTGCACAGAACGACGCTCAAGCACGAACTGGCAGTGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTT > 4:257528/1‑149 GTGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGA < 2:614479/149‑1 GAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACT > 2:960489/1‑149 GAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACT > 4:147787/1‑149 AGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTG > 1:1099384/1‑149 AGGAAGCCGGCTTTCACCGGCAAGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGCCTG < 3:1059158/149‑1 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA < 3:27623/149‑1 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA < 3:156659/149‑1 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA > 2:1320377/1‑149 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA < 4:1467233/149‑1 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA > 3:1240381/1‑149 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTC > 1:1382945/1‑77 GGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTC < 2:1382945/77‑1 GAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCAT > 1:727395/1‑124 GAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCAT < 2:727395/124‑1 TGAACGGTTATGCGACTGCCGACCGTTATACTGTGAGTAATGGCCTGGTTTTCGTGTCCGCTAACAATAACGGGCATTTGACACCACGCCTGCCGGTGAAAGCCGGCTTCCTCCTGCACAGAACGATGCTCAAGCACGAACTGGCAGTGAGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4425743‑4425590 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggaaGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGA > NC_000913/4425637‑4425781 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |