New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1327735 =	NA (NA)	11 (0.040)	9/242	NT	NA	intergenic (+8/+32)	rluB/btuR	23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase
	?	NC_000913	1327758 =	NA (NA)					intergenic (+31/+9)	rluB/btuR	23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase

GATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1327890‑1327735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT  >  NC_000913/1327758‑1327905                                                                                                                                                                                                                                                                                                                  GATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGT                                                                                                                                                             >  1:122740/1‑149  ATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTC                                                                                                                                                            >  1:171183/1‑149   TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCC                                                                                                                                                           >  1:1415641/1‑149   TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCC                                                                                                                                                           <  4:1779031/149‑1    TATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCG                                                                                                                                                          <  1:568540/149‑1     ATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGG                                                                                                                                                         <  1:280111/149‑1      TCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGC                                                                                                                                                        <  3:2103431/149‑1      TCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGC                                                                                                                                                        >  4:2059967/1‑149        ACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT                                                                                                                                                      >  4:145741/1‑149             TCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTA                                                                                                                                                 <  4:1930470/149‑1              CGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTAC                                                                                                                                                <  1:2222111/149‑1                              ATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACAGATTAATAATCGATC                                                                                                                                <  1:2497098/149‑1                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCC                          >  4:150332/1‑149                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA                                         >  3:1341734/1‑134                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA                                         <  4:1341734/134‑1                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAA                                                 >  4:2378816/1‑126                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAA                                                 <  3:2378816/126‑1                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTT                                                                                          <  1:1968451/85‑1                                                                                                                                    AAATGCCGGATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTT                                                                                          >  2:1968451/1‑85                                                                                                                                            GATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTAC                                                                     >  2:1606540/1‑98                                                                                                                                            GATATGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTAC                                                                     <  1:1606540/98‑1                                                                                                                                                       CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTT       >  4:268378/1‑149                                                                                                                                                       CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCATATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTT       >  1:2039985/1‑149                                                                                                                                                       CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCAC                                                                         >  4:1530414/1‑83                                                                                                                                                       CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCAC                                                                         <  3:1530414/83‑1                                                                                                                                                       CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGCAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTT       >  2:209943/1‑149                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTCTCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGG                                                                                    <  4:1122970/71‑1                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTG      >  2:2203114/1‑149                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTG      >  2:1485701/1‑149                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTG      >  1:2490680/1‑149                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGG                                                                                    >  3:1122970/1‑71                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCA                                                                                               <  4:490821/60‑1                                                                                                                                                        GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCA                                                                                               >  3:490821/1‑60                                                                                                                                                         GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGA     >  3:337300/1‑149                                                                                                                                                         GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGA     >  2:6527/1‑149                                                                                                                                                         GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGA     >  1:1764650/1‑149                                                                                                                                                          CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT    <  3:412756/149‑1                                                                                                                                                          CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT    <  2:2497098/149‑1                                                                                                                                                          CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT    <  1:627299/149‑1                                                                                                                                                          CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT    <  1:2373866/149‑1                                                                                                                                                           ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATG   >  2:875385/1‑149                                                                                                                                                           ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATG   >  4:2055124/1‑149                                                                                                                                                           ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA                                         <  4:1377719/111‑1                                                                                                                                                           ATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA                                         >  3:1377719/1‑111                                                                                                                                                            TTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT  <  1:2203114/149‑1                                                                                                                                                                                                                                                                                                                  GATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1327890‑1327735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT  >  NC_000913/1327758‑1327905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.