New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3898629 =	NA (NA)	5 (0.020)	5/242	NT	NA	intergenic (+20/+42)	cbrC/yieK	UPF0167 family protein/putative 6‑phosphogluconolactonase
	?	NC_000913	3898659 =	NA (NA)					intergenic (+50/+12)	cbrC/yieK	UPF0167 family protein/putative 6‑phosphogluconolactonase

AATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3898784‑3898629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  NC_000913/3898659‑3898806                                                                                                                                                                                                                                                                                                                   AATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑T                                                                                                                                                             <  3:1362794/149‑1  ATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TC                                                                                                                                                            <  1:1895649/149‑1  ATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TC                                                                                                                                                            <  1:1538438/149‑1   TGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCC                                                                                                                                                           >  3:2133875/1‑149     TTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCCGG                                                                                                                                                         <  2:1216130/149‑1     TTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCCGG                                                                                                                                                         >  4:1422405/1‑149        TGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCCGGCCT                                                                                                                                                      >  4:1725949/1‑149                  GGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGA‑GCGTAATTCACACATCCGGCCTTATTTCTTAA                                                                                                                                            <  2:1419993/149‑1                   GTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TC                                                                                                                                                            <  3:1436978/132‑1                   GTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCATTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TC                                                                                                                                                            >  4:1436978/1‑132                                                                                                                           AATAAGGCCGGATGTGTGAATTACGC‑TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACAC                                                                  >  4:1842483/1‑118                                                                                                                           AATAAGGCCGGATGTGTGAATTACGC‑TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACAC                                                                  <  3:1842483/118‑1                                                                                                                                 GCCGGATGTGTGAATTACGC‑TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                                                >  1:775511/1‑130                                                                                                                                 GCCGGATGTGTGAATTACGC‑TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTC                                                <  2:775511/130‑1                                                                                                                                                      TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGC         <  2:566931/149‑1                                                                                                                                                      TCCGGCCTTATTTCTTAAGCTTAACCGAGTGCGAATTCTGCAGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGC         <  4:2027428/149‑1                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTT      >  3:2184827/1‑149                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTT      <  2:1895649/149‑1                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTT      >  2:1483916/1‑149                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGC               >  1:679221/1‑140                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGC               <  2:847516/140‑1                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGC               <  2:679221/140‑1                                                                                                                                                         GGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGC               >  1:847516/1‑140                                                                                                                                                          GCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTA     <  2:2339364/149‑1                                                                                                                                                           CCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTAC    <  1:434419/149‑1                                                                                                                                                            CTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACC   >  3:1353023/1‑149                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  3:345127/1‑149                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  4:2240442/1‑149                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  4:2367102/1‑149                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  4:2382309/1‑149                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACC   <  3:462957/148‑1                                                                                                                                                             TTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACC   >  4:462957/1‑148                                                                                                                                                                                                                                                                                                                   AATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAAGCTTAAGAAATAAGGCCGGATGTGTGAATTACGC‑TCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3898784‑3898629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcctTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCTGGAACATCTTCGGTAACCGGACCTTGCAGAACATTTTTCAGTGCCTGCGCTTTACCC  >  NC_000913/3898659‑3898806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.