| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4587878 | NA (NA) | 8 (0.030) | 6/242 | NT | NA | noncoding (7/27 nt) | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 4587891 | NA (NA) | noncoding (20/27 nt) | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
GCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4587723‑4587878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggatAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTCGAC < NC_000913/4587891‑4587744 gtGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAG > 2:1123073/3‑149GCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAG > 1:1121953/1‑149GCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAG < 2:1742069/149‑1 GCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGC < 2:1002688/149‑1 CGTGACTTTGCCCAATTCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCC < 3:338726/149‑1 CGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGtc < 4:2347598/149‑3 CGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCC < 1:2030254/149‑1 GTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCG > 2:1625296/1‑149 GTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCG > 3:2393946/1‑149 TGACTTTGCCCAATGCGTCGGGGGCATGGTGTTGGATGATGGGGAACGCCTGCGGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAATCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGG > 2:2282398/1‑149 ACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGAT < 1:1190536/149‑1 GGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGC < 4:2292620/149‑1 GGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGC < 3:1127274/149‑1 TATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGCCT < 3:109292/149‑1 AAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGCC < 4:1311930/104‑1 AAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGCC > 3:1311930/1‑104 AACGAAGTAGGGGTTTCTTCCCATTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGCC < 2:818353/102‑1 AACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATAAGGCGCAGCCGCATCCGGCC > 1:818353/1‑102 TGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACC > 1:899625/1‑149 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCC > 2:612956/1‑131 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCC < 1:612956/131‑1 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCC > 3:899227/1‑130 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCC < 4:899227/130‑1 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAAC > 2:609576/1‑76 GGCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAAC < 1:609576/76‑1 GCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTTGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACC > 2:2525441/1‑149 GCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACC < 1:1079501/149‑1 GCCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACC > 3:585306/1‑149 CCGGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCC > 2:90435/1‑149 GGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTC > 1:2176825/1‑149 GGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATAC > 3:2074281/1‑145 GGATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATAC < 4:2074281/145‑1 ATAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTCGA < 1:2338452/149‑1 TAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTCGAC > 3:1333854/1‑149 TAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTCGAC > 4:1465802/1‑149 GCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4587723‑4587878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggatAAGGCGCAGCCGCATCCGGCCTGATATTTCACTCAAAATAGTCCATATCCAGTTTCGGCACCTTCAACAAACGTGAAGAAACCCCTACTTCGTTTTCGATCATTAAGTGCACCAGGCGTTCCCCATCAACCAACACCATACCCTCGAC < NC_000913/4587891‑4587744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |