| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3820032 | 382 (2.710) | 27 (0.190) +CAT |
4/478 | 12.4 | 6.5% | coding (1139/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent |
| ? | NC_000913 | 3820033 = | 390 (2.680) | coding (1138/1683 nt) | ligB | DNA ligase, NAD(+)‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3819758‑3820032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTAC > NC_000913/3820033‑3820197 ||| CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCAC > 2:319158/1‑276CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATACAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCAC > 2:482675/1‑276CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGAGCCAACCGGCCTCACCAATGCCATCAAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGACGCACAACAACAGGTCAACGAGTTAAAGCGGTTTTCTGCCGGTGGCGGTTTTGTATGTTCTGTACCGAGCCAAACAAC > 4:125352/1‑276CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCCGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAATCATCCGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTTTCGGTTTTGTACGTTTTGCCCCGCGCCACCCCAC > 4:245156/1‑276 GCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCAC > 3:626072/1‑275 GCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAAAGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCAACGCGCCACACCACA > 2:484768/1‑276 CACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACA > 1:541089/1‑275 CACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTGGTACGTTCTGCACCGCGCCACACCACAT > 4:397354/1‑276 TTTTTCTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCA < 2:749836/275‑1 TTTTACTTTTCGCGATCCCCGTAGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGGCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAT < 2:230897/276‑1 TTTACTTCTCCGGAACCCCGGCGGGTTCTTGAATTGGTAGGGCGTTAATAAAAACCAGGAAAAGTTAGGTTCAAAGCGATGGGGCTAATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCCAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAT < 3:182448/275‑1 TTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATTTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTTCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTAAGTTCTGCACCGCGCCACACCACATCATC > 2:181640/1‑275 TACTTTTCGCGATCCCCGGCGTGTTCGTTAATGGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCA < 3:89169/275‑1 TTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCCGGTCAACGAGTAAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTAAGTTATGCACCTCGCACCACCCCATCATCcattac > 4:168674/1‑269 CGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAACTGAACTGTTCCTGACAAACATAAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTGTTCTGGCGGTGTAGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAcaaatgctag > 2:380634/1‑265 CGCGATCCCCGGCGTGTTCTGAAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTTTCCGTTCTGCACCGCGCCACACCCCAACAcaaatgggtgg > 4:80907/1‑265 GTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACA > 1:323253/1‑203 TTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCA > 3:114056/1‑208 AAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAT < 3:323252/203‑1 AAAGCGATGAGTCGGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGACAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTATTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCAAACCAC < 2:645459/198‑1 GCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCA > 3:532983/1‑185 CGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCA > 1:428760/1‑182 AGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGAC > 3:214786/1‑275 TGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTAC < 1:214787/275‑1 AAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACAT > 4:561749/1‑108 TGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCAT < 2:561749/108‑1 TCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCACATCATCA > 3:55771/1‑102 ||| CGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGTAGCAGGTCAACGAGTTAAAGCGGTTTTCTGGCGGTGTCGGTTTTGTACGTTCTGCACCGCGCCACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3819758‑3820032‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCAATGCGAGGAATACCCTGACCGGCAAGGCTGACGAGAATCTGATCACCAGGCGCAATATCCCACTCCTGCCAGCGCCTGACGGAACCAATATTCACCCGCTGGACTTTTTTATCATCCAGCATGACAGGTGCGAGTGACGCAACCACCGATATTTTAC > NC_000913/3820033‑3820197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |