New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 458876683 (1.080)4 (0.060) 4/166 NT 5.0% coding (100/957 nt) yjiA metal‑binding GTPase
?NC_000913 = 4588775 75 (1.050)coding (91/957 nt) yjiA metal‑binding GTPase
Rejected: Frequency below cutoff threshold.

CGAACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4588662‑4588766
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggcTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACGGC  <  NC_000913/4588775‑4588677
                                                                                                                                                                                                            
CGAACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATC                                                                                                          >  1:1070575/1‑100
CGAACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATC                                                                                                          >  2:1625264/1‑100
   ACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACG                                                                                                       >  1:1473186/1‑100
   ACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACG                                                                                                       >  1:993684/1‑100
    CAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGG                                                                                                      >  1:1750492/1‑100
    CAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCAC                                                                                                        >  2:683186/1‑98
     AACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGC                                                                                                     <  2:1870145/100‑1
                    TGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCTACAAGATTGCCGTG                                                                                      <  1:222334/100‑1
                                   TCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCTACAAGATTGCCGTGATTGAAAACGAATTC                                                                       >  2:740800/1‑100
                                    CTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCG                                                                      <  1:980809/100‑1
                                      GCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGC                                                                    <  1:740803/100‑1
                                                                                              ccgatctCGGCTACATGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCT            <  1:2039559/93‑1
                                                                                                     CGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTagatcgg     >  2:2039543/1‑93
                                                                                                      GGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACG    <  2:1954547/100‑1
                                                                                                        CTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACGGC  <  2:767167/100‑1
                                                                                                                                                                                                            
CGAACAACAGATGCAGCCGTTGGTCAGCGTTTTGATCTGCGTGGCGCGGTCGCCAATCAGTTGATCATCAACAGAGACTTCGCCGAATTCGTTTTCAATCACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4588662‑4588766
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggcTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACGGC  <  NC_000913/4588775‑4588677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.