| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4605254 | 79 (1.030) | 3 (0.040) | 3/168 | NT | 4.0% | coding (410/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport |
| ? | NC_000913 | = 4605268 | 71 (0.980) | coding (396/789 nt) | fhuF | ferric iron reductase involved in ferric hydroximate transport | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TGCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4605151‑4605254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCATCGAATGGAAACGTTAATCAGCCAGGC < NC_000913/4605268‑4605173 TGCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAG < 2:1733454/100‑1TGCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAG < 2:281172/100‑1 nCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGA > 2:1056026/2‑100 GCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGA > 1:1343789/1‑100 TGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAAC < 2:545880/100‑1 GCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACCGGACGCGTCGCCTGTTTCTGGG < 1:560482/100‑1 CTGATTAGCGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACGTCGACCCAGAAACCGGACGCGTCGCCTGTTTCTGGGT < 2:1109695/100‑1 CATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAACCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAG < 2:424178/100‑1 GAAACCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCATCGAATGGAAACGTTAATCAGCCAGG > 2:449003/1‑100 AACCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCATCGAATGGAAACGTTAATCAGCCAGGC > 2:529717/1‑99 TGCTTGCACAACCGGAACCAGCGCCTGGCTGATTAACGTTTCCATTCGATGCTGCGGCGAATGTGGTGTTGCGTTTTTATCTTCACACACATCGACCCAGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4605151‑4605254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacCGGACGCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCATCGAATGGAAACGTTAATCAGCCAGGC < NC_000913/4605268‑4605173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |