| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 702,352 | Δ21 bp | 100% | coding (380‑400/1149 nt) | nagA ← | N‑acetylglucosamine‑6‑phosphate deacetylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 702351 | 3 (0.040) | 82 (1.080) | 56/176 | NT | 95.9% | coding (401/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
| ? | NC_000913 | 702373 = | 4 (0.050) | coding (379/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase | |||||
Only 100 of 105 total aligned reads displayed.
GTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGG > NC_000913/702252‑702450 | gTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCC > 2:1984280‑M1/1‑100 (MQ=255)gTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCC < 1:1442962‑M1/100‑1 (MQ=255) tAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCc < 2:2022205‑M1/100‑2 (MQ=255) tAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCc > 1:108828‑M1/1‑99 (MQ=255) tAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCc < 1:791416‑M1/100‑2 (MQ=255) aaTGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCct < 2:146650‑M1/100‑3 (MQ=255) gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaac > 2:1641958‑M1/1‑95 (MQ=255) gACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaac < 1:2071438‑M1/100‑6 (MQ=255) cGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgc > 1:1819076‑M1/1‑93 (MQ=255) gTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcc > 1:835004‑M1/1‑92 (MQ=255) gTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcc < 1:1851292‑M1/100‑9 (MQ=255) cGGCGTGTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAAGTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctg > 2:612312‑M1/1‑90 (MQ=255) ggCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTcc > 1:2058239/1‑100 (MQ=255) gCGTTTTCACACACGAAATCGACCATCGCGGCATCAGGCTTACGCACAAAAGTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctg < 2:954629‑M1/98‑11 (MQ=255) ttttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcg > 2:167112‑M1/1‑85 (MQ=255) ttttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcg < 1:1070720‑M1/100‑16 (MQ=255) tttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcgg > 1:136481‑M1/1‑84 (MQ=255) tttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcgg < 2:1573581‑M1/100‑17 (MQ=255) tttCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcgg > 1:1952839‑M1/1‑84 (MQ=255) cacccaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATGCAGCCctaacgcctgattcggatg < 2:1033067‑M1/100‑20 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcgggt > 2:755385‑M1/1‑81 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatg > 1:1123417‑M1/1‑81 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatg < 1:663719‑M1/100‑20 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatg > 1:417187‑M1/1‑81 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatg > 2:2075388‑M1/1‑81 (MQ=255) cacacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatg > 2:507697‑M1/1‑81 (MQ=255) acacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgt > 1:2002314‑M1/1‑80 (MQ=255) acacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgt > 2:635312‑M1/1‑80 (MQ=255) cacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgtt > 1:763082‑M1/1‑79 (MQ=255) cacaGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgtt > 1:639507‑M1/1‑79 (MQ=255) cacaGGAAATCGACCAGCGCGGCATCAGGCGTAGGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgtt > 2:1361929‑M1/1‑79 (MQ=255) ggAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgc > 1:1245704‑M1/1‑75 (MQ=255) ggAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgc < 1:528192‑M1/100‑26 (MQ=255) gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgcc > 1:520392‑M1/1‑74 (MQ=255) gAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgcc > 1:1603675‑M1/1‑74 (MQ=255) aaTCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccag < 2:695570‑M1/100‑29 (MQ=255) cGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggta > 2:155690‑M1/1‑69 (MQ=255) gACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtac > 2:1100704‑M1/1‑68 (MQ=255) gACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtac > 2:1234132‑M1/1‑68 (MQ=255) ccAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactc > 1:24496‑M1/1‑66 (MQ=255) cAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcg > 1:833257‑M1/1‑65 (MQ=255) aGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCg < 2:2058223/100‑1 (MQ=255) gcgcGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctcaagcctgattcggatgtttttcca > 2:1090325‑M1/1‑63 (MQ=255) gcgcGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcg > 2:1504955‑M1/1‑63 (MQ=255) cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgc > 1:1605953‑M1/1‑62 (MQ=255) cgcgGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgc > 1:701014‑M1/1‑62 (MQ=255) ggCATCTGGCTTAAGCACAAAATTCGGATTATGGGTGCCATTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgca < 1:1239781‑M1/98‑40 (MQ=255) aTCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacg < 1:55694‑M1/100‑45 (MQ=255) cAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcg > 2:937324‑M1/1‑54 (MQ=255) ggCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgca > 1:766526‑M1/1‑52 (MQ=255) gCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcac < 1:1641969‑M1/100‑50 (MQ=255) cTTACGCACAACATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacg < 2:496690‑M1/100‑51 (MQ=255) cTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGtttt > 2:918239/1‑94 (MQ=255) ttACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgc < 1:469201‑M1/100‑52 (MQ=255) tACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgcc < 1:1037534‑M1/100‑53 (MQ=255) cGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccct > 1:215128‑M1/1‑46 (MQ=255) gCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctg > 1:986325‑M1/1‑45 (MQ=255) acaAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtt > 1:944845‑M1/1‑43 (MQ=255) acaAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccct > 1:890706‑M1/1‑43 (MQ=255) caAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgttt < 1:1978805‑M1/100‑59 (MQ=255) aaaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttc < 2:1581694‑M1/100‑60 (MQ=255) aaaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttc < 2:108826‑M1/100‑60 (MQ=255) aaaTTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttca > 1:1317569‑M1/1‑40 (MQ=255) ttCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatca < 1:53010‑M1/100‑64 (MQ=255) ttCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatca > 1:45947‑M1/1‑37 (MQ=255) tCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcag < 1:635316‑M1/100‑65 (MQ=255) tCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcag < 1:458192‑M1/100‑65 (MQ=255) tCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcag < 2:1577024‑M1/100‑65 (MQ=255) cGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagc < 1:1504965‑M1/100‑66 (MQ=255) cGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagc > 1:1086641‑M1/1‑35 (MQ=255) gATTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgcccagtttcatcagctc > 1:1207130‑M1/1‑33 (MQ=255) aTTATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctca > 1:1448229‑M1/1‑32 (MQ=255) tATGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatc < 1:119038‑M1/100‑71 (MQ=255) tGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgc > 2:1797258‑M1/1‑28 (MQ=255) tGGGTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcacacgccctgtttcatcagctcatcgc > 2:211816‑M1/1‑28 (MQ=255) gggTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgct < 2:24495‑M1/100‑74 (MQ=255) gTGCCTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctgg > 2:1843369‑M1/1‑25 (MQ=255) ccTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtgg < 2:61744‑M1/100‑79 (MQ=255) ccTTTTTTTACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtgg < 1:1848806‑M1/100‑79 (MQ=255) tttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgat < 2:417184‑M1/100‑83 (MQ=255) tttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgat < 1:2032943‑M1/100‑83 (MQ=255) ttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgata > 2:1575470‑M1/1‑17 (MQ=255) ttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgata < 1:118853‑M1/100‑84 (MQ=255) ttttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgata < 2:1194578‑M1/100‑84 (MQ=255) ttACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataag > 2:1814386‑M1/1‑15 (MQ=255) tACCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtctcatcagctcatcgctggtggtgataag > 2:2009423‑M1/1‑14 (MQ=255) aCCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcg > 1:1144919‑M1/1‑13 (MQ=255) aCCAGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgagcacgccctgtttcatcagctcatcgctggtggtgataagag < 1:1403032‑M1/100‑88 (MQ=255) aGATTCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcg < 2:1123412‑M1/100‑91 (MQ=255) tCAGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcag > 2:1124903‑M1/1‑6 (MQ=255) aGCCctaacgcctgattcggatgttttgccaggtactctcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagat > 1:2007982‑M1/1‑4 (MQ=255) aGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagat > 2:1298595‑M1/1‑4 (MQ=255) aGCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagat < 1:210233‑M1/100‑97 (MQ=255) gCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagata > 2:121852‑M1/1‑3 (MQ=255) gCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagata < 1:1843383‑M1/100‑98 (MQ=255) gCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagata < 1:167115‑M1/100‑98 (MQ=255) gCCctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcaagat > 1:1115432‑M1/1‑3 (MQ=255) gCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCtggt > 2:1612444/1‑100 (MQ=255) cctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagt < 2:639503‑M1/100‑100 (MQ=255) cctaacgcctgattcggatgttttgccaggtactcgcgcataacgcgcacgccctgtttcatcagctcatcgctggtggtgataagcgtcggcagatagt > 2:767981‑M1/1‑1 (MQ=255) | GTAATGACGTCGGCGTTTTCACACAGGAAATCGACCAGCGCGGCATCAGGCTTACGCACAAAATTCGGATTATGGGTGCCTTTTTTTACCAGATTCAGCCACGGACCTTCCAGATGCAGACCTAACGCCTGATTCGGATGTTTTGCCAGGTACTCGCGCATAACGCGCACGCCCTGTTTCATCAGCTCATCGCTGGTGG > NC_000913/702252‑702450 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |