New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3296999 =NA (NA)5 (0.070) 5/164 NT NA noncoding (1/84 nt) REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3297032 = NA (NA)noncoding (34/84 nt) REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 111 total aligned reads displayed.

ACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAT  >  NC_000913/3296900‑3297098
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gtgattgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggctgcggcgtaaacgccttatctgacctacggtttgtatcgttttagg                                                                                                     <  1:1733404‑M1/1‑1 (MQ=255)
gtgattgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagg                                                                                                     <  1:182799‑M1/1‑1 (MQ=255)
 tgattgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGc                                                                                                    <  1:1706732‑M1/2‑1 (MQ=255)
  gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc                                                                                                   <  2:1348382/100‑1 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  1:1110927/100‑1 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  2:1095075/100‑1 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  2:147982/100‑1 (MQ=255)
   attgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCt                                                                                                  >  2:72091‑M1/97‑100 (MQ=255)
    ttgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTg                                                                                                 <  2:295328‑M1/5‑1 (MQ=255)
    gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTg                                                                                                 >  1:2040981/1‑100 (MQ=255)
     tgtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTGa                                                                                                >  2:2050312‑M1/95‑100 (MQ=255)
      gtcggcgggctggcgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTGAt                                                                                               <  2:948136‑M1/7‑1 (MQ=255)
      aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt                                                                                               >  1:1754434/1‑100 (MQ=255)
      aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGACGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt                                                                                               >  2:1281789/1‑100 (MQ=255)
        cGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGc                                                                                             <  1:959766/100‑1 (MQ=255)
         gAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCg                                                                                            >  2:1036747/1‑100 (MQ=255)
         gAAAGCGGCGGCAGATATGGCCAGCCGGGTGAGCGGCTTGAAGCTGGTAACTACGGCGTGTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGGTGc                                                                                             >  1:176401/1‑99 (MQ=255)
            aGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg                                                                                         >  2:2015722/1‑100 (MQ=255)
            aGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg                                                                                         >  2:2021820/1‑100 (MQ=255)
             gcggcgGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGc                                                                                        >  1:100106/1‑100 (MQ=255)
              cggcggCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCt                                                                                       <  1:523876/100‑1 (MQ=255)
                gcggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTg                                                                                     <  2:1874573/100‑1 (MQ=255)
                gcggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTg                                                                                     <  2:63743/100‑1 (MQ=255)
                 cggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGc                                                                                    >  2:1029045/1‑100 (MQ=255)
                   cgctgttgttctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTGATGCGACGCTTGCcg                                                                                  >  1:1674455‑M1/81‑100 (MQ=255)
                    cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgc                                                                                 >  2:246863/1‑100 (MQ=255)
                    cAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgc                                                                                 >  1:1412800/1‑100 (MQ=255)
                     aGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgcg                                                                                >  1:192565/1‑100 (MQ=255)
                       atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc                                                                              <  1:1158943/100‑1 (MQ=255)
                        tatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCt                                                                             <  1:1257088/100‑1 (MQ=255)
                        tatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCt                                                                             <  2:1412790/100‑1 (MQ=255)
                         atTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCtt                                                                            >  2:1078602/1‑100 (MQ=255)
                           tGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                          >  1:1892036/1‑100 (MQ=255)
                            ctgatttgagggaaaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtaatGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                         >  1:1613087‑M1/72‑100 (MQ=255)
                             ccAGCCGGGTGAGCGGCGTGAAGCGGGTAACTCCGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCt                                                                             >  1:1552953/1‑95 (MQ=255)
                              cAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg                                                                       >  2:1755595/1‑100 (MQ=255)
                               aGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCat                                                                       <  2:689631/99‑2 (MQ=255)
                                gCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                     >  1:598599/1‑100 (MQ=255)
                                 tttgagggaaaacatgtcgtatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    >  2:2010125‑M1/67‑100 (MQ=255)
                                   gggTGAGCGGCGTTAATCGGGTAACTATGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCCACGCTTGCCGCGTCTTATCAGGcc                                                                    <  2:1848225/98‑1 (MQ=38)
                                   gggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                  <  1:141944/100‑1 (MQ=255)
                                   gggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                  >  1:1110744/1‑100 (MQ=255)
                                    ggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 <  1:1029048/100‑1 (MQ=255)
                                    ggTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 >  2:304495/1‑100 (MQ=255)
                                          aaacatgtcggatgcggcgtaaacgccttatctgacctacggtttgtatcgttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt                                                           >  2:425708‑M1/58‑100 (MQ=255)
                                           ggcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATa                                                          >  2:586712/1‑100 (MQ=255)
                                           ggcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATa                                                          <  1:1295275/100‑1 (MQ=255)
                                             cgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACa                                                        <  1:67476/100‑1 (MQ=255)
                                             cgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACa                                                        >  1:258371/1‑100 (MQ=255)
                                                gAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc                                                     >  2:1129255/1‑100 (MQ=255)
                                                gAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc                                                     >  1:1699251/1‑100 (MQ=255)
                                                gAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc                                                     >  2:644968/1‑100 (MQ=255)
                                                   gCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGt                                                  <  2:192562/100‑1 (MQ=255)
                                                   gCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGt                                                  <  1:2048904/100‑1 (MQ=255)
                                                    cGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTa                                                 <  1:2015738/100‑1 (MQ=255)
                                                    cGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCCTCTTATCAGGCCTACAACGATACAAACCGTa                                                 <  1:1395136/100‑1 (MQ=255)
                                                     gggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAg                                                >  2:258213/1‑100 (MQ=255)
                                                      ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg                                               <  2:18919/100‑1 (MQ=255)
                                                      ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg                                               >  1:63642/1‑100 (MQ=255)
                                                       gTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGt                                              <  1:1621157/100‑1 (MQ=255)
                                                        tAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATCCAAACCGTAGGTc                                             <  2:1732508/100‑1 (MQ=255)
                                                        tAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTc                                             <  2:100104/100‑1 (MQ=255)
                                                           cTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGa                                          >  2:1563247/1‑100 (MQ=255)
                                                            tACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGAt                                         >  2:875462/1‑100 (MQ=255)
                                                               ggCGTTTACGTTTATTAAATAGCAGCTCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAg                                      <  2:1046501/100‑1 (MQ=255)
                                                               ggCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAg                                      >  1:1412187/1‑100 (MQ=255)
                                                               ggCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAg                                      >  2:2040516/1‑100 (MQ=255)
                                                                gCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAgg                                     <  1:1417829/100‑1 (MQ=255)
                                                                  gtttacgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCg                                   <  2:682687/100‑1 (MQ=255)
                                                                    ttacgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGtt                                 <  2:92496/100‑1 (MQ=255)
                                                                       cgtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAc                              >  1:375254/1‑100 (MQ=255)
                                                                        gtttaTTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcg                             <  1:706627/100‑1 (MQ=255)
                                                                          ttattaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgcc                           <  1:1129260/100‑1 (MQ=255)
                                                                           tattaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgccg                          <  1:1519123/100‑1 (MQ=255)
                                                                           gtcctacggtttgtatcgttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgccg                          >  1:153589‑M1/25‑100 (MQ=255)
                                                                             ttaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCa                        >  2:1255547/1‑100 (MQ=255)
                                                                             ttaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCa                        <  1:1714432/100‑1 (MQ=255)
                                                                              tccgatctagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCAt                       <  1:449800/92‑1 (MQ=255)
                                                                               aaaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATc                      >  2:1188845/1‑100 (MQ=255)
                                                                               aaaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATc                      >  1:572675/1‑100 (MQ=255)
                                                                                  tAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGa                   >  2:951841/1‑100 (MQ=255)
                                                                                   agcagcCTCTTGTAATGCTTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCTTTTACGTCGCATCCGAc                  <  2:927198/100‑1 (MQ=25)
                                                                                    gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGCCa                 >  1:1550480/1‑100 (MQ=255)
                                                                                    gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACa                 >  2:465089/1‑100 (MQ=255)
                                                                                    gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACa                 <  1:1281795/100‑1 (MQ=255)
                                                                                      agcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCAtagatcgga               >  2:449796/1‑92 (MQ=255)
                                                                                      agcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATg               <  2:1016885/100‑1 (MQ=255)
                                                                                        ccccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGtt             >  2:1871749/1‑100 (MQ=255)
                                                                                         cccTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGttt            >  1:1113333/1‑100 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  2:4355/100‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  1:904900/100‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCAACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACAt                <  2:1988163/94‑1 (MQ=255)
                                                                                             tGTTATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTctc        <  2:1090065/100‑3 (MQ=255)
                                                                                              gTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc        <  2:735547/99‑1 (MQ=255)
                                                                                                aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCa     <  2:2063478/100‑1 (MQ=255)
                                                                                                aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCa     <  2:2063479/100‑1 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaaa   >  1:1838643/1‑100 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaaa   <  1:266881/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACGTGTTTTCCCTCAAAt  <  1:2043972‑M1/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAt  <  1:956198‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAT  >  NC_000913/3296900‑3297098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.