| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 732857 = | NA (NA) | 11 (0.150) | 4/170 | NT | 24.2% | coding (3275/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 732888 = | 36 (0.470) | coding (3306/4194 nt) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor | |||||
GCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCG > NC_000913/732789‑732987 | tcaggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgg < 2:1587585‑M2/1‑1 (MQ=255)tcaggccacacgatgccagccagcggctgctttcctctctcacccggtcagccaggatttcactttcctgccggtcgagcatctgcaccagcaccggcgg < 1:1608802‑M2/1‑1 (MQ=255)gCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTg < 1:1976367/100‑1 (MQ=33) caggccgcactatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 2:1364020‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcacctgcatcggcggg < 2:1094667‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 1:541536‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 2:943085‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 1:2015407‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg > 2:2062852‑M2/99‑100 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 1:1478219‑M2/2‑1 (MQ=255) caggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 2:836420‑M2/2‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcggg < 2:1749275‑M2/2‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 1:1589633‑M2/3‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 1:693243‑M2/3‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 2:34979‑M2/3‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 1:1904227‑M2/3‑1 (MQ=255) aggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 1:1587253‑M2/3‑1 (MQ=255) aGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGa < 1:1890452/100‑1 (MQ=33) aGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGa < 1:1226031/100‑1 (MQ=33) aGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGa > 2:588280/1‑100 (MQ=33) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 1:59368‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 1:1820607‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 2:898544‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 1:1704580‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 1:189260‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 2:224651‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa < 2:680221‑M2/4‑1 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 1:1669980‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 2:543716‑M2/97‑100 (MQ=255) ggccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 2:779976‑M2/3‑1 (MQ=255) gccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGaa > 2:625651‑M2/96‑99 (MQ=255) gccgcacgatgccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgGGa < 2:1262897‑M2/3‑1 (MQ=255) cgccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGaaa > 2:1156136/1‑100 (MQ=33) gccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAg < 2:1642035/100‑1 (MQ=33) gccgcAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAg > 1:1000517/1‑100 (MQ=33) cgcAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTg < 1:923915/100‑1 (MQ=33) cAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGaa < 1:1421539/100‑1 (MQ=33) ggCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTg < 1:1994960/100‑1 (MQ=33) ggCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTg < 1:1903257/100‑1 (MQ=33) ggCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGCGTGGTGTTCCCGCCAGTACTGGTGGAGAGGATCGCCCGGCTGGAAAGTGAAATCCTg > 2:1455744/1‑100 (MQ=11) gCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTgg < 1:1676787/100‑1 (MQ=33) ccgatctccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGc < 1:1824053/93‑1 (MQ=12) cGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGc < 1:758074/100‑1 (MQ=33) cGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGc < 2:1298929/100‑1 (MQ=33) ggATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCt < 2:540337/100‑1 (MQ=33) aCCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc < 2:1751728/100‑1 (MQ=33) cccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:546891/1‑100 (MQ=33) cccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:1912293/1‑100 (MQ=33) cccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:1684371/1‑100 (MQ=33) ccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGcagatcgg > 2:1824040/1‑93 (MQ=255) ccTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCgg > 2:993364/1‑100 (MQ=33) cTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 2:1582247/100‑1 (MQ=33) agcagTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag < 1:779391/100‑1 (MQ=33) cagTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtg > 1:984308/1‑100 (MQ=33) cagTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtg > 1:1276596/1‑100 (MQ=33) agTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:1813557/1‑100 (MQ=33) agTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga < 2:123204/100‑1 (MQ=32) gTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGtgagtgag < 1:2004303/100‑1 (MQ=33) tCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAgg < 1:1533044/100‑1 (MQ=33) ccGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGa < 2:396799/100‑1 (MQ=32) ccGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGa > 1:497500/1‑100 (MQ=32) gTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAg > 1:139537/1‑100 (MQ=31) gTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAg > 1:2066107/1‑100 (MQ=31) gccaggatttcactttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggct > 1:713696‑M2/50‑100 (MQ=255) gccaggatttcactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCgctggctg > 1:1925898‑M2/49‑100 (MQ=255) atttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATc > 2:881995‑M2/44‑100 (MQ=255) atttcactttccagccggtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATc > 1:155194‑M2/44‑100 (MQ=255) atttcactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCg > 1:1641836‑M2/43‑100 (MQ=255) cactttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg > 2:1621085‑M2/39‑100 (MQ=255) actttccagcccgtcgagcatctgcaccagcaccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCg > 2:1088268‑M2/39‑100 (MQ=255) ctttccagccggtcgagcatctgcaccgtgccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc > 1:1340176‑M2/37‑100 (MQ=255) ctttccagccggtcgagcatctgcaccgtgccggcgGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGc > 1:849171‑M2/37‑100 (MQ=255) ttccagccggtcgagcatctgcaccagcaccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGcc > 1:1575434‑M2/36‑100 (MQ=255) agccggtcgagcatctgcaccgtgccggctGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGacc > 1:1060208‑M2/31‑99 (MQ=255) cTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGgcgc > 2:347980/1‑100 (MQ=32) tGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAg > 1:917552/1‑100 (MQ=35) tGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAg > 1:579595/1‑100 (MQ=35) tGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAg > 1:1729751/1‑100 (MQ=35) aCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGAt < 2:2074388/100‑1 (MQ=38) ccGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATg > 1:1150865/1‑100 (MQ=38) cGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATgg > 2:352159/1‑100 (MQ=38) cGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATgg < 1:1828562/100‑1 (MQ=38) GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCg > 1:946446‑M2/1‑100 (MQ=255) GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCg > 2:721307‑M2/1‑100 (MQ=255) GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCg > 2:1700360‑M2/1‑100 (MQ=255) | GCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCG > NC_000913/732789‑732987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |