BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3336923 =	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (5/34 nt)	REP244 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP244 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3336953 =	NA (NA)	3 (0.040)	3/166	NT	NA	intergenic (‑150/+10)	ibaG/mlaB	acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component

Only 100 of 111 total aligned reads displayed.

TTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTG  >  NC_000913/3336854‑3337050

ttGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                                                                                                   <  1:961399/100‑1 (MQ=255)

  gcgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTg                                                                                                 <  2:517183/100‑1 (MQ=255)

  gcgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTg                                                                                                 <  1:319427/100‑1 (MQ=255)

         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                                                                          <  1:1816337/100‑1 (MQ=255)

         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                                                                          >  1:835153/1‑100 (MQ=255)

          ataaataaGCAAAAAGCCTCGCTGATATATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                                                                                         <  2:423110/100‑1 (MQ=255)

          ataaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAtt                                                                                         <  1:413561/100‑1 (MQ=255)

           taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAttt                                                                                        >  1:1057143/1‑100 (MQ=255)

            aaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTa                                                                                       <  1:777572/100‑1 (MQ=255)

            aaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTa                                                                                       >  2:150888/1‑100 (MQ=255)

             aataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTa                                                                                       >  2:1309155/1‑99 (MQ=255)

              ataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAc                                                                                     <  1:442222/100‑1 (MQ=255)

                 aGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGACCGTTAACGCCATATCCGGCATGCAAAACttccacgcg                                                                                  >  1:1420711/1‑93 (MQ=255)

                  gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg                                                                                 <  1:1040628/100‑1 (MQ=255)

                  gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg                                                                                 <  1:536579/100‑1 (MQ=255)

                  gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg                                                                                 >  1:1784585/1‑100 (MQ=255)

                   cAAAACGCCTCGCTGATAAATCATACAAGGCTCGACTTGCAGGCAGGTTTGCTGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAg                                                                                  <  2:658793/98‑1 (MQ=255)

                   cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc                                                                                <  1:271251/100‑1 (MQ=255)

                      aaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGa                                                                             <  1:656881/100‑1 (MQ=255)

                      aaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGa                                                                             <  1:657699/100‑1 (MQ=255)

                      aaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGa                                                                             <  1:1501241/100‑1 (MQ=255)

                      aaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGa                                                                             <  2:299688/100‑1 (MQ=255)

                        aGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAc                                                                           >  2:1767306/1‑100 (MQ=255)

                         gCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACa                                                                          >  1:878240/1‑100 (MQ=255)

                         gCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACa                                                                          <  1:986499/100‑1 (MQ=255)

                         gCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACa                                                                          >  1:726013/1‑100 (MQ=255)

                          ccTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACAt                                                                         >  2:1927569/1‑100 (MQ=255)

                            tCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATca                                                                       >  1:778100/1‑100 (MQ=255)

                              gCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcagc                                                                     <  1:1099553/100‑1 (MQ=255)

                              gCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcagc                                                                     <  2:1122376/100‑1 (MQ=255)

                               cTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcagca                                                                    <  1:1048430/100‑1 (MQ=255)

                                 gATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAgg                                                                  <  1:885832/100‑1 (MQ=255)

                                 gATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAgg                                                                  >  1:1163464/1‑100 (MQ=255)

                                    aaaTCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCa                                                                >  1:393981/1‑99 (MQ=255)

                                         aGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtat                                                          >  1:1831523/1‑100 (MQ=255)

                                          gACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtata                                                         >  1:16473/1‑100 (MQ=255)

                                            cAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACa                                                       >  1:1951690/1‑100 (MQ=255)

                                              aGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAt                                                     >  1:1192794/1‑100 (MQ=255)

                                               ggCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAtt                                                    <  2:772492/100‑1 (MQ=255)

                                               ggCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAtt                                                    >  1:730556/1‑100 (MQ=255)

                                               ggCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAtt                                                    >  1:1099145/1‑100 (MQ=255)

                                                gCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAttt                                                   >  2:78883/1‑100 (MQ=255)

                                                gCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAttt                                                   >  1:1264857/1‑100 (MQ=255)

                                                 cTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTc                                                  >  2:42184/1‑100 (MQ=255)

                                                 cTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTc                                                  >  1:1492819/1‑100 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                >  1:1085766/1‑100 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                <  1:42186/100‑1 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                <  1:64959/100‑1 (MQ=255)

                                                      cTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCGGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAg                                             >  1:452895/1‑100 (MQ=255)

                                                       ttGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAgg                                            <  1:1197749/100‑1 (MQ=255)

                                                        taaattttttcaggccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAggg                                           >  1:1828513‑M2/44‑100 (MQ=255)

                                                        tGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAggg                                           <  1:546438/100‑1 (MQ=255)

                                                        tGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATAGCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAggg                                           <  2:700296/100‑1 (MQ=255)

                                                          caggccggTCTGCCGGACAGGAGGTTAACGCCATATCCGGCCGGAAAAAATGTAACGAGGCAGAAGATCAGCAGGCAAAGTATACAATGTCGCCAg                                             >  2:689928/1‑96 (MQ=255)

                                                          caggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGta                                         <  1:1366280/100‑1 (MQ=255)

                                                          caggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGta                                         >  1:1488019/1‑100 (MQ=255)

                                                            ggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGtata                                       >  1:1589162/1‑100 (MQ=255)

                                                            ggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGtata                                       >  2:1689726/1‑100 (MQ=255)

                                                            ggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGtata                                       >  1:570272/1‑100 (MQ=255)

                                                              caggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATaca                                     <  2:1269373/100‑1 (MQ=255)

                                                              caggCTTGCCTGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATac                                      <  2:781742/99‑1 (MQ=255)

                                                                ggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACt                                   >  1:1739406/1‑100 (MQ=255)

                                                                    tGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGt                               >  2:656717/1‑100 (MQ=255)

                                                                    tGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGt                               >  1:757886/1‑100 (MQ=255)

                                                                    ggccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGt                               >  1:806162‑M2/32‑100 (MQ=255)

                                                                     gctggACATTCGGTGAGCGTCATATCGGGCCTGAAAAAATTTAACGTGGCATATCATCTGCAGGCAAATTATACAACCTTGCCAGGGTAGACTCTTTGTc                              <  2:1236378/97‑1 (MQ=255)

                                                                     gccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                              >  2:1933089‑M2/31‑100 (MQ=255)

                                                                     GCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                              <  1:1070808‑M1/100‑1 (MQ=255)

                                                                     GCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                              >  2:1523852‑M1/1‑100 (MQ=255)

                                                                      CCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCg                             <  1:1819083‑M1/100‑1 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                          >  1:1640539‑M1/1‑100 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                          >  2:1621277‑M1/1‑100 (MQ=255)

                                                                          ACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTa                         >  1:142570‑M1/1‑100 (MQ=255)

                                                                           cAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAc                        <  2:1493248/100‑1 (MQ=255)

                                                                             ngCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      >  2:557631/2‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      <  1:928235/100‑1 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      >  1:2008102/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      >  1:1471840/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      >  1:467428/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      >  2:1273883/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                      <  2:236670/100‑1 (MQ=255)

                                                                              gCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAcccc                     >  2:1293129/1‑100 (MQ=255)

                                                                               cGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTAGACACTTTGTCGTTTAccccc                    <  2:1264851/100‑1 (MQ=255)

                                                                                ggTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGCACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCt                   >  2:67184/1‑100 (MQ=255)

                                                                                ggTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCt                   >  2:198754/1‑100 (MQ=255)

                                                                                ggTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCt                   <  2:1130085/100‑1 (MQ=255)

                                                                                   tAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGaa                >  1:1696263/1‑100 (MQ=255)

                                                                                   tAACGCCATATCCGGCATGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGaa                <  1:1864419/100‑1 (MQ=255)

                                                                                      cGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCg             >  1:737249/1‑100 (MQ=255)

                                                                                       gCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGt            >  2:1592013/1‑100 (MQ=255)

                                                                                        ccATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGTGTTTACACTTTGTCGTTTACCCCCTGAAGCGTc           <  2:1362559/100‑1 (MQ=255)

                                                                                        ccATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTATGTCGTTTACCCCCTGAAGCGTc           <  2:35463/100‑1 (MQ=255)

                                                                                           tatCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTcaca        >  1:2059847/1‑100 (MQ=255)

                                                                                           tatCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTcaca        >  1:992023/1‑100 (MQ=255)

                                                                                             tccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAtt      >  1:854378‑M2/7‑100 (MQ=255)

                                                                                              ccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttg     >  1:1292634‑M2/6‑100 (MQ=255)

                                                                                              ccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttg     >  2:1677603‑M2/6‑100 (MQ=255)

                                                                                              ccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTGCGCCAGGGTATACACTTGGTCGGTTACCCCCTGAAGCGTCACAttg     >  1:1654421‑M2/6‑100 (MQ=255)

                                                                                               cggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttgt    <  1:425566‑M2/96‑1 (MQ=255)

                                                                                                 gcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttgttg  <  2:1784572‑M2/98‑1 (MQ=255)

TTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTG  >  NC_000913/3336854‑3337050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.