New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 225998	NA (NA)	7 (0.100)	7/170	NT	NA	noncoding (240/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
	?	NC_000913	= 226015	NA (NA)					noncoding (257/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon

ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCAC  >  NC_000913/225923‑226111                                                                                             |                                                                                                 aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                                           <  1:926299/100‑1 (MQ=11)    ggTTCATGAGGCGAACCGGGGGAACTGCAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGCGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                                        >  2:1200481/1‑100 (MQ=255)    ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                                        <  2:1578658/100‑1 (MQ=32)      ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                      <  1:1004371/100‑1 (MQ=33)      ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                      <  1:1393571/100‑1 (MQ=33)      ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                      <  2:658263/100‑1 (MQ=33)        aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCag                                                                                    <  2:407912/100‑1 (MQ=33)         aTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCaga                                                                                   >  1:1161009/1‑100 (MQ=33)          tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                                  <  2:1058666/100‑1 (MQ=33)            aGGCGAATCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                <  2:1117799/100‑1 (MQ=18)            aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                >  2:1008461/1‑100 (MQ=33)             ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                               >  1:459124/1‑100 (MQ=33)             ggCGAACCGGGGGAACGGAAACGTCTAAGAACCCCGAGGAAAAGAACTCGACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGGGAAGAGCCAaggg                                                                                  >  2:646800/1‑95 (MQ=11)              gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGCAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                              <  2:1330244/100‑1 (MQ=18)              gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCGGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                              <  1:1461586/100‑1 (MQ=18)              gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                              <  2:972011/100‑1 (MQ=33)               ctaaCCGGGGGAAATGAAACATCTAAGTACCACGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                                             >  1:1397348/3‑100 (MQ=255)               cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                                             <  2:1642299/100‑1 (MQ=33)                gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                                            <  2:289021/100‑1 (MQ=33)                  aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTCAATc                                                                          >  2:589597/1‑100 (MQ=17)                   ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAAAGAACGGGGAGGAGCCCAGAGCCTGAATCa                                                                         >  2:202034/1‑100 (MQ=12)                     gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                       >  1:373915/1‑100 (MQ=33)                     gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                       <  1:1528877/100‑1 (MQ=33)                      ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                      >  1:1832574/1‑100 (MQ=33)                      ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                      <  1:882481/100‑1 (MQ=33)                       gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                                     <  2:702523/100‑1 (MQ=32)                       gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                                     <  1:213305/100‑1 (MQ=33)                        ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                    >  1:898485/1‑100 (MQ=33)                         naaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAAAGCCTGAAACAgtg                                                                      >  2:847438/2‑97 (MQ=12)                          aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCtgtgtgtg                                                                  <  1:1093720/100‑1 (MQ=18)                          aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                  <  1:1636695/100‑1 (MQ=33)                          aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                  <  2:1554666/100‑1 (MQ=33)                          aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                  <  1:150260/100‑1 (MQ=33)                          aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                  >  1:309004/1‑100 (MQ=33)                           aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgcgtgt                                                                 >  1:111997/1‑100 (MQ=17)                            cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                >  1:1036515/1‑100 (MQ=33)                            cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                >  1:1309963/1‑100 (MQ=33)                            cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                >  1:1312449/1‑100 (MQ=33)                             tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                               <  1:1262473/100‑1 (MQ=33)                              gAAACATCTAAGTACCCCGATGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAACCTGAATCAgtgtgtgtgt                                                               >  2:1930210/1‑99 (MQ=12)                                aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                            <  1:574607/100‑1 (MQ=33)                                aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                            <  2:665516/100‑1 (MQ=33)                                aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                            <  1:262164/100‑1 (MQ=32)                                 aCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGt                                                           <  2:592168/100‑1 (MQ=33)                                  cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCTGAATCAGTGTGTGTGTTAGTg                                                          >  2:938579/1‑100 (MQ=17)                                  cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                                          >  1:1841950/1‑100 (MQ=33)                                  cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGGGAGTGTTAGTg                                                          >  2:1815607/1‑100 (MQ=12)                                    tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                                        <  1:336903/100‑1 (MQ=33)                                     cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGaa                                                       <  2:1979780/100‑1 (MQ=33)                                      tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                      >  1:682377/1‑100 (MQ=32)                                      tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGACGACCCCAGAGCCTGCCTCACTGCGTGTGTTAGTggca                                                       >  2:1815291/1‑97 (MQ=11)                                          tACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTc                                                  <  1:1996937/100‑1 (MQ=33)                                          tACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTc                                                  <  1:979989/100‑1 (MQ=33)                                          tACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTc                                                  >  1:1775069/1‑100 (MQ=33)                                            ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                >  1:1177498/1‑100 (MQ=33)                                            ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                >  1:1699903/1‑100 (MQ=33)                                            ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                >  1:1352693/1‑100 (MQ=33)                                             cccGCGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGCGTGTGTTAGTGGAAGCGCCt                                                 >  2:32738/1‑98 (MQ=255)                                             cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                               >  1:319628/1‑100 (MQ=33)                                             cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                               <  2:1861274/100‑1 (MQ=33)                                             cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                               >  2:690953/1‑100 (MQ=32)                                              ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                              >  1:75090/1‑100 (MQ=33)                                              ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                              <  1:756425/100‑1 (MQ=33)                                              ccGAGGAAAAGAAAGCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                                 <  2:1788149/97‑1 (MQ=18)                                               cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGCAGGAGCCCAGAGCCTGAATCACTGTGTGTGTTAGTGAAACCCTCTg                                                >  2:664652/1‑97 (MQ=11)                                                  ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                                          <  2:1762264/100‑1 (MQ=33)                                                  ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGGGTGGTAGTGGAAGCGTCTGGAAAgg                                          >  2:255474/1‑100 (MQ=12)                                                    aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGGCTGGAAAGgcg                                        >  2:1479868/1‑100 (MQ=17)                                                     aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGCGCCTGCATCAGTGCGGGTGTTAGTGGAAGCGTCTGGACAGgcgc                                       >  2:1742048/1‑100 (MQ=11)                                                     aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                                       <  1:1212501/100‑1 (MQ=33)                                                      aaGAAATCAACCGAGATTCCCCGAGTAGCGGCGAGCGGACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg                                      <  2:1397338/100‑1 (MQ=16)                                                          aaTCAACCGAGGTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                    <  2:1383657/98‑1 (MQ=17)                                                          aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGCGCCTGAATCAGTGTGTGTGTTAGGGGAAGCGTCTGGAAAGGCGCGCGAt                                  >  2:853614/1‑100 (MQ=16)                                                          aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                                  >  1:1608675/1‑100 (MQ=33)                                                           aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                                 <  1:1636613/100‑1 (MQ=33)                                                              aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGGCTGGAAAGGCGCGCGATACAg                              >  2:2053376/1‑100 (MQ=17)                                                              aaCCGAGAAACCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                              <  1:1210440/100‑1 (MQ=16)                                                                  gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg                          <  1:690956/100‑1 (MQ=33)                                                                    gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc                        <  2:183631/100‑1 (MQ=33)                                                                    gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc                        >  2:970822/1‑100 (MQ=33)                                                                      ttCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg                      >  1:1081243/1‑100 (MQ=33)                                                                        cccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcc                    >  2:1889386/1‑100 (MQ=33)                                                                         ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc                   >  1:571929/1‑100 (MQ=33)                                                                           ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                 <  2:373912/100‑1 (MQ=32)                                                                           ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                 <  1:806575/100‑1 (MQ=33)                                                                            cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCATCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGt                >  1:1455217/1‑100 (MQ=18)                                                                             aGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTa               <  2:171849/100‑1 (MQ=32)                                                                             aGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTa               <  1:1474659/100‑1 (MQ=33)                                                                              gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac              <  1:649855/100‑1 (MQ=33)                                                                               tAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTaca             <  1:781550/100‑1 (MQ=33)                                                                                aGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTacac            <  1:1789531/100‑1 (MQ=33)                                                                                aGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTacac            >  1:666826/1‑100 (MQ=33)                                                                                 gcggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTAcaca           <  1:277097/100‑1 (MQ=33)                                                                                    gcgagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaaa        >  1:1847340/1‑100 (MQ=33)                                                                                      gagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAAt      >  1:596307/1‑100 (MQ=33)                                                                                       agcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATg     <  1:1809656/100‑1 (MQ=33)                                                                                         cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca   >  2:1340302/1‑100 (MQ=33)                                                                                          gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac  <  2:1352685/100‑1 (MQ=33)                                                                                             |                                                                                                 ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCAC  >  NC_000913/225923‑226111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.